RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 FTH1P19P0C7X4 201 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 TIMM23BQ5SRD1 257 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 ZNF562Q6V9R5 426 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 Q6ZR03 302 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 OR9G1Q8NH87 305 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 GTSF1LQ9H1H1 148 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 TMEM133Q9H2Q1 129 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 SPANXB1Q9NS25 103 aaPredicted RBP4.14□□□□□ -1.75
RIF1-203ENST00000428287 TMEM140Q9NV12 185 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 TCRBV4S1A1TA0A5B7 111 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 RIPPLY3P57055 190 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 CFAP161Q6P656 301 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 OR10W1Q8NGF6 305 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 ADTRPQ96IZ2 230 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 FAM103A1Q9BTL3 118 aaKnown RBP4.14□□□□□ -1.75
RIF1-203ENST00000428287 PHF7Q9BWX1 381 aaPredicted RBP4.14□□□□□ -1.75
RIF1-203ENST00000428287 OTOGQ6ZRI0 2925 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 TRAV26-1A0A087WT03 109 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 SH2D7A6NKC9 451 aaPredicted RBP4.14□□□□□ -1.75
RIF1-203ENST00000428287 NXPH1P58417 271 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 PRAMEF5Q5TYX0 476 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 PRAMEF6Q5VXH4 476 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 Q6AWC8 147 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 FAM53AQ6NSI3 398 aaPredicted RBP4.14□□□□□ -1.75
RIF1-203ENST00000428287 A0A1B0GW15 77 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 SMAD7O15105 426 aaKnown RBP4.14□□□□□ -1.75
RIF1-203ENST00000428287 ZNF207O43670 478 aaKnown RBP4.14□□□□□ -1.75
RIF1-203ENST00000428287 IFI27L2Q9H2X8 130 aa4.14□□□□□ -1.75
RIF1-203ENST00000428287 CXCL13O43927 109 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 CAMPP49913 170 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 MLF1P58340 268 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 ERASQ7Z444 233 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 JPT1Q9UK76 154 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 RNASE2P10153 161 aaKnown RBP4.13□□□□□ -1.75
RIF1-203ENST00000428287 FOXG1P55316 489 aaPredicted RBP4.13□□□□□ -1.75
RIF1-203ENST00000428287 ARF1P84077 181 aaKnown RBP4.13□□□□□ -1.75
RIF1-203ENST00000428287 PLP2Q04941 152 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 PIP4P1Q86T03 277 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 ST6GALNAC6Q969X2 333 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 FNDC4Q9H6D8 234 aaPredicted RBP4.13□□□□□ -1.75
RIF1-203ENST00000428287 R4GN57 208 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 IGHG4P01861 327 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 GUSBP1Q15486 140 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 ZNF841Q6ZN19 808 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 CT55Q8WUE5 264 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 BADQ92934 168 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 SSBP3Q9BWW4 388 aaPredicted RBP4.13□□□□□ -1.75
RIF1-203ENST00000428287 PRNDQ9UKY0 176 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 MYF5P13349 255 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 SMAGPQ0VAQ4 97 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 TMEM30BQ3MIR4 351 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 TMEM116Q8NCL8 245 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 U3KQK5 164 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 CRYGCP07315 174 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 ZNF134P52741 427 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 WFDC2Q14508 124 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 EPDR1Q9UM22 224 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 IGKV1D-37A0A075B6S9 117 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 LINC01546A6NGU7 62 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 CER1O95813 267 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 MT-CO3P00414 261 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 COX6A1P12074 109 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 FABP2P12104 132 aa4.13□□□□□ -1.75
RIF1-203ENST00000428287 ZNF808Q8N4W9 903 aaPredicted RBP4.13□□□□□ -1.75
RIF1-203ENST00000428287 SSR4P51571 173 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 MEF2CQ06413 473 aaPredicted RBP4.12□□□□□ -1.75
RIF1-203ENST00000428287 ZNF296Q8WUU4 475 aaPredicted RBP4.12□□□□□ -1.75
RIF1-203ENST00000428287 MRPL16Q9NX20 251 aaKnown RBP4.12□□□□□ -1.75
RIF1-203ENST00000428287 LINC00312Q9Y6C7 94 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.12□□□□□ -1.75
RIF1-203ENST00000428287 RBMXL2O75526 392 aaKnown RBP4.12□□□□□ -1.75
RIF1-203ENST00000428287 RFPL3SP0C7P2 107 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 GPR12P47775 334 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 ETDBQ3ZM63 59 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 UBALD1Q8TB05 177 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 A1L4Q6 167 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 SCRG1O75711 98 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 KIR2DS2P43631 304 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 AESQ08117 197 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 MORN5Q5VZ52 161 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 TTC9CQ8N5M4 171 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 GCSAMQ8N6F7 178 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 THAP8Q8NA92 274 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 DKK4Q9UBT3 224 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 MRPL33O75394 65 aaKnown RBP4.12□□□□□ -1.75
RIF1-203ENST00000428287 IGKV3-15P01624 115 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 ACP7Q6ZNF0 438 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 MOB3BQ86TA1 216 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 LINC01600Q96MT4 127 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 RPP21Q9H633 154 aaKnown RBP4.12□□□□□ -1.75
RIF1-203ENST00000428287 SPCS1Q9Y6A9 102 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 TRAV3A0A0B4J244 114 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 KLRC4-KLRK1H3BQV0 150 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 IGLV2-11P01706 119 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 HLA-DRB4P13762 266 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 MC5RP33032 325 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 CRYBA4P53673 196 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 RNASEKQ6P5S7 137 aaKnown RBP4.12□□□□□ -1.75
RIF1-203ENST00000428287 TMEM108Q6UXF1 575 aa4.12□□□□□ -1.75
RIF1-203ENST00000428287 PATE2Q6UY27 113 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms