RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 INTS1Q8N201 2190 aaKnown RBP10.79□□□□□ -0.68
SPG11-202ENST00000427534 OVOL3O00110 214 aa10.79□□□□□ -0.68
SPG11-202ENST00000427534 DUSP14O95147 198 aaKnown RBP10.79□□□□□ -0.68
SPG11-202ENST00000427534 DEFB131AP59861 70 aa10.79□□□□□ -0.68
SPG11-202ENST00000427534 ASPHD1Q5U4P2 390 aa10.79□□□□□ -0.68
SPG11-202ENST00000427534 EPDR1Q9UM22 224 aa10.79□□□□□ -0.68
SPG11-202ENST00000427534 DUTP33316 252 aaKnown RBP10.79□□□□□ -0.68
SPG11-202ENST00000427534 C17orf82Q86X59 251 aaPredicted RBP10.79□□□□□ -0.68
SPG11-202ENST00000427534 C18orf12Q96KH6 178 aa10.79□□□□□ -0.68
SPG11-202ENST00000427534 CHTOPQ9Y3Y2 248 aaKnown RBP10.79□□□□□ -0.68
SPG11-202ENST00000427534 CA7P43166 264 aa10.79□□□□□ -0.68
SPG11-202ENST00000427534 RSPO3Q9BXY4 272 aaPredicted RBP10.79□□□□□ -0.68
SPG11-202ENST00000427534 SPTBN2O15020 2390 aa10.79□□□□□ -0.68
SPG11-202ENST00000427534 CDK2AP2O75956 126 aa10.79□□□□□ -0.68
SPG11-202ENST00000427534 PLSCR4Q9NRQ2 329 aa10.79□□□□□ -0.68
SPG11-202ENST00000427534 SPTA1P02549 2419 aa10.78□□□□□ -0.68
SPG11-202ENST00000427534 SSBP2P81877 361 aaPredicted RBP10.78□□□□□ -0.68
SPG11-202ENST00000427534 TIMP3P35625 211 aa10.78□□□□□ -0.68
SPG11-202ENST00000427534 DTX2Q86UW9 622 aa10.78□□□□□ -0.68
SPG11-202ENST00000427534 A0A1B0GWB2 263 aa10.78□□□□□ -0.68
SPG11-202ENST00000427534 ANXA2RQ3ZCQ2 193 aa10.78□□□□□ -0.68
SPG11-202ENST00000427534 GAFA1Q96PS6 74 aa10.78□□□□□ -0.68
SPG11-202ENST00000427534 TRAV12-2A0A075B6T6 113 aa10.78□□□□□ -0.68
SPG11-202ENST00000427534 HGFACQ04756 655 aa10.78□□□□□ -0.68
SPG11-202ENST00000427534 LINC00271P0C7V0 271 aa10.78□□□□□ -0.68
SPG11-202ENST00000427534 DSCR9P59020 149 aa10.78□□□□□ -0.68
SPG11-202ENST00000427534 FNDC4Q9H6D8 234 aaPredicted RBP10.78□□□□□ -0.68
SPG11-202ENST00000427534 CARHSP1Q9Y2V2 147 aaKnown RBP10.78□□□□□ -0.68
SPG11-202ENST00000427534 TRBV9A0A0B4J1U6 114 aa10.77□□□□□ -0.68
SPG11-202ENST00000427534 IGHV3-38A0A0C4DH36 116 aa10.77□□□□□ -0.68
SPG11-202ENST00000427534 BUB1B-PAK6H3BSN5 160 aa10.77□□□□□ -0.68
SPG11-202ENST00000427534 PAX4O43316 350 aa10.77□□□□□ -0.68
SPG11-202ENST00000427534 CRYGSP22914 178 aa10.77□□□□□ -0.68
SPG11-202ENST00000427534 TEX38Q6PEX7 206 aa10.77□□□□□ -0.68
SPG11-202ENST00000427534 ZSWIM8A7E2V4 1837 aa10.77□□□□□ -0.68
SPG11-202ENST00000427534 TRGV11A0A075B6L2 103 aa10.77□□□□□ -0.68
SPG11-202ENST00000427534 WFDC1Q9HC57 220 aa10.77□□□□□ -0.69
SPG11-202ENST00000427534 TRAV8-1A0A0A6YYK1 113 aa10.77□□□□□ -0.69
SPG11-202ENST00000427534 SRP19P09132 144 aaKnown RBP10.77□□□□□ -0.69
SPG11-202ENST00000427534 C14orf178Q8N769 122 aaPredicted RBP10.77□□□□□ -0.69
SPG11-202ENST00000427534 RNF126Q9BV68 326 aa10.77□□□□□ -0.69
SPG11-202ENST00000427534 EFNB3Q15768 340 aa10.77□□□□□ -0.69
SPG11-202ENST00000427534 JPT2Q9H910 190 aa10.77□□□□□ -0.69
SPG11-202ENST00000427534 NHP2Q9NX24 153 aaKnown RBP10.77□□□□□ -0.69
SPG11-202ENST00000427534 G3V318 75 aa10.76□□□□□ -0.69
SPG11-202ENST00000427534 PAX9P55771 341 aa10.76□□□□□ -0.69
SPG11-202ENST00000427534 LY6G6FQ5SQ64 297 aa10.76□□□□□ -0.69
SPG11-202ENST00000427534 C20orf204Q6ZNR8 217 aa10.76□□□□□ -0.69
SPG11-202ENST00000427534 CACNA1BQ00975 2339 aa10.76□□□□□ -0.69
SPG11-202ENST00000427534 A0A1B0GV90 55 aa10.76□□□□□ -0.69
SPG11-202ENST00000427534 IZUMO1RA6ND01 250 aa10.76□□□□□ -0.69
SPG11-202ENST00000427534 SPSB3Q6PJ21 355 aa10.76□□□□□ -0.69
SPG11-202ENST00000427534 TICRRQ7Z2Z1 1910 aa10.76□□□□□ -0.69
SPG11-202ENST00000427534 CR1LQ2VPA4 569 aa10.76□□□□□ -0.69
SPG11-202ENST00000427534 SPINK13Q1W4C9 94 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 PVRIGQ6DKI7 326 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 BMPERQ8N8U9 685 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 DOCK7Q96N67 2140 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 A8MXK9 166 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 FAM186AA6NE01 2351 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 SLC50A1Q9BRV3 221 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 GAGE12JA6NER3 117 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 GAGE1Q13065 139 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 GAGE4Q13068 117 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 GAGE5Q13069 117 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 GAGE13Q4V321 117 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 NABP1Q96AH0 204 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 RHPN1-AS1Q9BWJ2 59 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 FANCMQ8IYD8 2048 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 MPZP25189 248 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 CCL20P78556 96 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 HEATR1Q9H583 2144 aaKnown RBP10.75□□□□□ -0.69
SPG11-202ENST00000427534 HOXA3O43365 443 aaPredicted RBP10.75□□□□□ -0.69
SPG11-202ENST00000427534 CACNG8Q8WXS5 425 aa10.75□□□□□ -0.69
SPG11-202ENST00000427534 SERF1AO75920 110 aa10.74□□□□□ -0.69
SPG11-202ENST00000427534 FAM120AOSQ5T036 256 aa10.74□□□□□ -0.69
SPG11-202ENST00000427534 MSMBP08118 114 aa10.74□□□□□ -0.69
SPG11-202ENST00000427534 DERL1Q9BUN8 251 aa10.74□□□□□ -0.69
SPG11-202ENST00000427534 SBF1O95248 1867 aa10.74□□□□□ -0.69
SPG11-202ENST00000427534 GRNP28799 593 aaKnown RBP10.74□□□□□ -0.69
SPG11-202ENST00000427534 PRCDQ00LT1 54 aa10.74□□□□□ -0.69
SPG11-202ENST00000427534 SRSF1Q07955 248 aaKnown RBP eCLIP10.74□□□□□ -0.692e-7■■■■□ 21.9
SPG11-202ENST00000427534 TMEM144Q7Z5S9 345 aa10.74□□□□□ -0.69
SPG11-202ENST00000427534 NAPSAO96009 420 aa10.74□□□□□ -0.69
SPG11-202ENST00000427534 TCF15Q12870 199 aa10.74□□□□□ -0.69
SPG11-202ENST00000427534 OCC1Q8TAD7 63 aa10.74□□□□□ -0.69
SPG11-202ENST00000427534 GAGE12BA1L429 117 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 H3BUT2 72 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 K7ENP7 123 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 GAGE7O76087 117 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 LHBP01229 141 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 GAGE12FP0CL80 117 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 GAGE12GP0CL81 117 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 GAGE12IP0CL82 117 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 RPL23P62829 140 aaKnown RBP10.73□□□□□ -0.69
SPG11-202ENST00000427534 TRAV8-2A0A0B4J237 113 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 A6NNC1 897 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 ZNF138P52744 262 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 MDS2Q8NDY4 140 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 LAMTOR3Q9UHA4 124 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms