RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 LINC00854A0A1B0GVQ3 168 aa11.51□□□□□ -0.57
HLA-DQB2-230ENST00000427449 MED6O75586 246 aa11.51□□□□□ -0.57
HLA-DQB2-230ENST00000427449 NKX2-1P43699 371 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQB2-230ENST00000427449 AP2S1P53680 142 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQB2-230ENST00000427449 ARL16Q0P5N6 197 aa11.51□□□□□ -0.57
HLA-DQB2-230ENST00000427449 C20orf85Q9H1P6 137 aa11.51□□□□□ -0.57
HLA-DQB2-230ENST00000427449 RAB11AP62491 216 aa11.5□□□□□ -0.57
HLA-DQB2-230ENST00000427449 TMEM41BQ5BJD5 291 aa11.5□□□□□ -0.57
HLA-DQB2-230ENST00000427449 SPANXN5Q5MJ07 72 aa11.5□□□□□ -0.57
HLA-DQB2-230ENST00000427449 ZNF705AQ6ZN79 300 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB2-230ENST00000427449 SMIM8Q96KF7 97 aa11.5□□□□□ -0.57
HLA-DQB2-230ENST00000427449 CLUHP3Q96NS8 147 aa11.5□□□□□ -0.57
HLA-DQB2-230ENST00000427449 HRH4Q9H3N8 390 aa11.5□□□□□ -0.57
HLA-DQB2-230ENST00000427449 SAV1Q9H4B6 383 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB2-230ENST00000427449 FAT2Q9NYQ8 4349 aa11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 ZNF705FA8MVS1 300 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 H3BRN7 92 aa11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 SSSCA1O60232 199 aa11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 ZNF705DP0CH99 300 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 ZNF705BP0CI00 300 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 PSMB3P49720 205 aa11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 AMTNQ6UX39 209 aa11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 TMEM144Q7Z5S9 345 aa11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 TMEM217Q8N7C4 229 aa11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 ZBTB8BQ8NAP8 495 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 TBC1D24Q9ULP9 559 aa11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 SLC45A2Q9UMX9 530 aa11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 DNAH2Q9P225 4427 aa11.49□□□□□ -0.57
HLA-DQB2-230ENST00000427449 TRAV8-2A0A0B4J237 113 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 ZNF98A6NK75 572 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 F6UB75 175 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 K7EPK0 472 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 MRPS12O15235 138 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 LYRM1O43325 122 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 MIFP14174 115 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 NUP62P37198 522 aaPredicted RBP11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 PLP1P60201 277 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 PRR20EP86478 221 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 PRR20CP86479 221 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 PRR20DP86480 221 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 PRR20BP86481 221 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 PRR20AP86496 221 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 C11orf45Q8TAV5 145 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 SCRT1Q9BWW7 348 aa11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 STRAPQ9Y3F4 350 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB2-230ENST00000427449 SNRPGP15A8MWD9 76 aa11.47□□□□□ -0.57
HLA-DQB2-230ENST00000427449 CCSO14618 274 aa11.47□□□□□ -0.57
HLA-DQB2-230ENST00000427449 MBPP02686 304 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQB2-230ENST00000427449 IL15RAQ13261 267 aa11.47□□□□□ -0.57
HLA-DQB2-230ENST00000427449 PATE2Q6UY27 113 aa11.47□□□□□ -0.57
HLA-DQB2-230ENST00000427449 RPP25LQ8N5L8 163 aaKnown RBP11.47□□□□□ -0.57
HLA-DQB2-230ENST00000427449 COQ8AQ8NI60 647 aa11.47□□□□□ -0.57
HLA-DQB2-230ENST00000427449 PSENENQ9NZ42 101 aa11.47□□□□□ -0.57
HLA-DQB2-230ENST00000427449 A0A0J9YX75 114 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 C7orf66A4D0T2 115 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 FNDC10F2Z333 226 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 ISLRO14498 428 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 TCRBP04435 133 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 SNRPD3P62318 126 aaKnown RBP11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 DLK1P80370 383 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 IAH1Q2TAA2 248 aaPredicted RBP11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 FOXI2Q6ZQN5 318 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 CYP2G1PQ6ZSU1 146 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 Q6ZTC4 211 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 SEC22CQ9BRL7 303 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 SLC35B3Q9H1N7 401 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 XCL2Q9UBD3 114 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 FBXL17Q9UF56 701 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 PAIP2BQ9ULR5 123 aaKnown RBP11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 APLNQ9ULZ1 77 aa11.46□□□□□ -0.57
HLA-DQB2-230ENST00000427449 TSC22D2O75157 780 aa11.45□□□□□ -0.58
HLA-DQB2-230ENST00000427449 LY6G6CO95867 125 aa11.45□□□□□ -0.58
HLA-DQB2-230ENST00000427449 METTL15P1P0C7V9 234 aa11.45□□□□□ -0.58
HLA-DQB2-230ENST00000427449 TAS2R30P59541 319 aa11.45□□□□□ -0.58
HLA-DQB2-230ENST00000427449 C4orf46Q504U0 113 aa11.45□□□□□ -0.58
HLA-DQB2-230ENST00000427449 LGALS9CQ6DKI2 356 aa11.45□□□□□ -0.58
HLA-DQB2-230ENST00000427449 SHANK2-AS3Q9BTD1 123 aa11.45□□□□□ -0.58
HLA-DQB2-230ENST00000427449 NUDT15Q9NV35 164 aa11.45□□□□□ -0.58
HLA-DQB2-230ENST00000427449 NDUFA13Q9P0J0 144 aa11.45□□□□□ -0.58
HLA-DQB2-230ENST00000427449 DNAH17Q9UFH2 4485 aa11.45□□□□□ -0.58
HLA-DQB2-230ENST00000427449 DEDDO75618 318 aa11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 CFDP00746 253 aaPredicted RBP11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 FABP1P07148 127 aa11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 RPP30P78346 268 aaKnown RBP11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 IFITM3Q01628 133 aa11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 AKR1C1Q04828 323 aa11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 C12orf74Q32Q52 190 aa11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 C1orf158Q8N1D5 194 aa11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 UHRF2Q96PU4 802 aa11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 NEU1Q99519 415 aa11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 CCDC32Q9BV29 185 aa11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 SLC25A39Q9BZJ4 359 aaPredicted RBP11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 MFFQ9GZY8 342 aa11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 KLK5Q9Y337 293 aaPredicted RBP11.44□□□□□ -0.58
HLA-DQB2-230ENST00000427449 TRAV6A0A075B6T7 132 aa11.43□□□□□ -0.58
HLA-DQB2-230ENST00000427449 HLA-DMBP28068 263 aa11.43□□□□□ -0.58
HLA-DQB2-230ENST00000427449 INPP1P49441 399 aa11.43□□□□□ -0.58
HLA-DQB2-230ENST00000427449 FXYD7P58549 80 aa11.43□□□□□ -0.58
HLA-DQB2-230ENST00000427449 MORN5Q5VZ52 161 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms