RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 KIAA0141Q14154 515 aaPredicted RBP11.24□□□□□ -0.61
CDK3-201ENST00000425876 ZNF674Q2M3X9 581 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 C9orf152Q5JTZ5 239 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 ZNF343Q6P1L6 599 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 Q6YL49 198 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 FAM223AQ8IWN6 122 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 EEF1AKMT3Q96AZ1 226 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 TCEAL7Q9BRU2 100 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 SHANK2-AS3Q9BTD1 123 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 SLC25A39Q9BZJ4 359 aaPredicted RBP11.24□□□□□ -0.61
CDK3-201ENST00000425876 S4R3C0 116 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 IL4P05112 153 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 PYYP10082 97 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 GP9P14770 177 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 PPIFP30405 207 aaKnown RBP11.24□□□□□ -0.61
CDK3-201ENST00000425876 TMEM190Q8WZ59 177 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 CCDC168Q8NDH2 2452 aa11.23□□□□□ -0.61
CDK3-201ENST00000425876 ZNF469Q96JG9 3925 aaPredicted RBP11.23□□□□□ -0.61
CDK3-201ENST00000425876 SCO2A0A1W2PP80 73 aa11.23□□□□□ -0.61
CDK3-201ENST00000425876 OR2T8A6NH00 312 aa11.23□□□□□ -0.61
CDK3-201ENST00000425876 GGTLC3B5MD39 225 aa11.23□□□□□ -0.61
CDK3-201ENST00000425876 H3BRN7 92 aa11.23□□□□□ -0.61
CDK3-201ENST00000425876 AKR1C3P42330 323 aa11.23□□□□□ -0.61
CDK3-201ENST00000425876 BLCAPP62952 87 aa11.23□□□□□ -0.61
CDK3-201ENST00000425876 TMEM242Q9NWH2 141 aa11.23□□□□□ -0.61
CDK3-201ENST00000425876 RNF24Q9Y225 148 aa11.23□□□□□ -0.61
CDK3-201ENST00000425876 ITPR3Q14573 2671 aa11.22□□□□□ -0.61
CDK3-201ENST00000425876 CXorf65A6NEN9 183 aa11.22□□□□□ -0.61
CDK3-201ENST00000425876 TSPAN4O14817 238 aa11.22□□□□□ -0.61
CDK3-201ENST00000425876 S100A7P31151 101 aa11.22□□□□□ -0.61
CDK3-201ENST00000425876 ADMP35318 185 aa11.22□□□□□ -0.61
CDK3-201ENST00000425876 RPL23P62829 140 aaKnown RBP11.22□□□□□ -0.61
CDK3-201ENST00000425876 ATP5G2Q06055 141 aa11.22□□□□□ -0.61
CDK3-201ENST00000425876 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
CDK3-201ENST00000425876 C15orf54Q8N8G6 183 aa11.22□□□□□ -0.61
CDK3-201ENST00000425876 CTDSP1Q9GZU7 261 aa11.22□□□□□ -0.61
CDK3-201ENST00000425876 VPREB3Q9UKI3 123 aa11.22□□□□□ -0.61
CDK3-201ENST00000425876 IGHV3-23P01764 117 aa11.21□□□□□ -0.61
CDK3-201ENST00000425876 CLEC3BP05452 202 aa11.21□□□□□ -0.61
CDK3-201ENST00000425876 NBEAP1P0C6P0 100 aa11.21□□□□□ -0.61
CDK3-201ENST00000425876 HIST1H1EP10412 219 aaKnown RBP11.21□□□□□ -0.61
CDK3-201ENST00000425876 SUMO1P63165 101 aaKnown RBP11.21□□□□□ -0.61
CDK3-201ENST00000425876 CIARTQ8N365 385 aaPredicted RBP11.21□□□□□ -0.61
CDK3-201ENST00000425876 USMG5Q96IX5 58 aa11.21□□□□□ -0.61
CDK3-201ENST00000425876 CCDC140Q96MF4 163 aa11.21□□□□□ -0.61
CDK3-201ENST00000425876 CHRDL1Q9BU40 450 aa11.21□□□□□ -0.61
CDK3-201ENST00000425876 LY96Q9Y6Y9 160 aa11.21□□□□□ -0.61
CDK3-201ENST00000425876 C9JCJ5 164 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 TRGV3P03979 118 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 GPR183P32249 361 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 MYCNOSP40205 109 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 ADIRFQ15847 76 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 USF2Q15853 346 aaPredicted RBP11.2□□□□□ -0.62
CDK3-201ENST00000425876 BPIFA4PQ86YQ2 179 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 MS4A10Q96PG2 267 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 DERL1Q9BUN8 251 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 LINC00527Q9UJ94 153 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 ZNF98A6NK75 572 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 COLCA2A8K830 154 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 TGOLN2O43493 480 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 IGLV1-40P01703 118 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 MT-ND4LP03901 98 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 CFHR3Q02985 330 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 LEMD1Q68G75 181 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 C2CD4CQ8TF44 421 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 ELOVL1Q9BW60 279 aa11.2□□□□□ -0.62
CDK3-201ENST00000425876 TMA7Q9Y2S6 64 aaKnown RBP11.2□□□□□ -0.62
CDK3-201ENST00000425876 BMPR1BO00238 502 aa11.19□□□□□ -0.62
CDK3-201ENST00000425876 CRYBB3P26998 211 aa11.19□□□□□ -0.62
CDK3-201ENST00000425876 CLEC19AQ6UXS0 136 aa11.19□□□□□ -0.62
CDK3-201ENST00000425876 Q6ZS46 218 aa11.19□□□□□ -0.62
CDK3-201ENST00000425876 LINC01551Q86U37 167 aa11.19□□□□□ -0.62
CDK3-201ENST00000425876 ZNF329Q86UD4 541 aa11.19□□□□□ -0.62
CDK3-201ENST00000425876 ZNF414Q96IQ9 312 aa11.19□□□□□ -0.62
CDK3-201ENST00000425876 NOL4LQ96MY1 436 aaPredicted RBP11.19□□□□□ -0.62
CDK3-201ENST00000425876 TRBV20OR9-2A0A075B6H5 130 aa11.18□□□□□ -0.62
CDK3-201ENST00000425876 TMEM89A2RUT3 159 aa11.18□□□□□ -0.62
CDK3-201ENST00000425876 HELTA6NFD8 242 aa11.18□□□□□ -0.62
CDK3-201ENST00000425876 CD99P14209 185 aa11.18□□□□□ -0.62
CDK3-201ENST00000425876 RPL35P42766 123 aaKnown RBP11.18□□□□□ -0.62
CDK3-201ENST00000425876 RELQ04864 619 aaPredicted RBP11.18□□□□□ -0.62
CDK3-201ENST00000425876 RNF212Q495C1 297 aa11.18□□□□□ -0.62
CDK3-201ENST00000425876 TOMM20LQ6UXN7 152 aa11.18□□□□□ -0.62
CDK3-201ENST00000425876 OR4F17Q8NGA8 305 aa11.18□□□□□ -0.62
CDK3-201ENST00000425876 HIST1H2BAQ96A08 127 aa11.18□□□□□ -0.62
CDK3-201ENST00000425876 YPEL4Q96NS1 127 aa11.18□□□□□ -0.62
CDK3-201ENST00000425876 RABAC1Q9UI14 185 aa11.18□□□□□ -0.62
CDK3-201ENST00000425876 A0A0G2JLM5 398 aa11.17□□□□□ -0.62
CDK3-201ENST00000425876 CLDN34H7C241 214 aa11.17□□□□□ -0.62
CDK3-201ENST00000425876 SMAD7O15105 426 aaKnown RBP11.17□□□□□ -0.62
CDK3-201ENST00000425876 MRPS12O15235 138 aaKnown RBP11.17□□□□□ -0.62
CDK3-201ENST00000425876 IGLC2P0DOY2 106 aa11.17□□□□□ -0.62
CDK3-201ENST00000425876 RAB9AP51151 201 aa11.17□□□□□ -0.62
CDK3-201ENST00000425876 TPPP2P59282 170 aa11.17□□□□□ -0.62
CDK3-201ENST00000425876 TAS2R60P59551 318 aa11.17□□□□□ -0.62
CDK3-201ENST00000425876 RANP62826 216 aaKnown RBP11.17□□□□□ -0.62
CDK3-201ENST00000425876 TMEM86BQ8N661 226 aa11.17□□□□□ -0.62
CDK3-201ENST00000425876 ANAPC16Q96DE5 110 aa11.17□□□□□ -0.62
CDK3-201ENST00000425876 PRSS22Q9GZN4 317 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 511.1 ms