RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 ESDP10768 282 aa9.53□□□□□ -0.88
ERCC1-204ENST00000423698 USF1P22415 310 aaPredicted RBP9.53□□□□□ -0.88
ERCC1-204ENST00000423698 RTL8BQ17RB0 113 aa9.53□□□□□ -0.88
ERCC1-204ENST00000423698 V9GYV3 84 aa9.53□□□□□ -0.88
ERCC1-204ENST00000423698 TRAV9-2A0A087WT02 112 aa9.52□□□□□ -0.89
ERCC1-204ENST00000423698 PRSS46E5RG02 174 aa9.52□□□□□ -0.89
ERCC1-204ENST00000423698 APCSP02743 223 aa9.52□□□□□ -0.89
ERCC1-204ENST00000423698 CRYBA4P53673 196 aa9.52□□□□□ -0.89
ERCC1-204ENST00000423698 RHOBP62745 196 aa9.52□□□□□ -0.89
ERCC1-204ENST00000423698 RAB31Q13636 194 aa9.52□□□□□ -0.89
ERCC1-204ENST00000423698 SFXN3Q9BWM7 321 aa9.52□□□□□ -0.89
ERCC1-204ENST00000423698 MRPS16Q9Y3D3 137 aaKnown RBP9.52□□□□□ -0.89
ERCC1-204ENST00000423698 TRGV8A0A0C4DH27 118 aa9.52□□□□□ -0.89
ERCC1-204ENST00000423698 FBLL1A6NHQ2 334 aaKnown RBP9.52□□□□□ -0.89
ERCC1-204ENST00000423698 GNG4P50150 75 aa9.52□□□□□ -0.89
ERCC1-204ENST00000423698 VWC2Q2TAL6 325 aa9.52□□□□□ -0.89
ERCC1-204ENST00000423698 Q6ZS92 163 aa9.52□□□□□ -0.89
ERCC1-204ENST00000423698 MUC15Q8N387 334 aa9.52□□□□□ -0.89
ERCC1-204ENST00000423698 TMEM14BQ9NUH8 114 aa9.52□□□□□ -0.89
ERCC1-204ENST00000423698 FAM181BA6NEQ2 426 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 ZNF138P52744 262 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 ZNF788Q6ZQV5 615 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 ASCL5Q7RTU5 278 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 TMEM186Q96B77 213 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 RPUSD1Q9UJJ7 312 aaKnown RBP9.51□□□□□ -0.89
ERCC1-204ENST00000423698 OR4C46A6NHA9 309 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 G3V4G9 280 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 THBDP07204 575 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 CGB3P0DN86 165 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 CGB7P0DN87 165 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 TRAT1Q6PIZ9 186 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 CTSZQ9UBR2 303 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.51□□□□□ -0.891e-6■■□□□ 14.1
ERCC1-204ENST00000423698 hADV38S2A0JD32 116 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 HELTA6NFD8 242 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 GGTLC3B5MD39 225 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 APOA2P02652 100 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 LINC00869P0C866 280 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 MFAP2P55001 183 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 PAX2Q02962 417 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 C18orf32Q8TCD1 76 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 RAB37Q96AX2 223 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 ZNF714Q96N38 554 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 CHRDL1Q9BU40 450 aa9.51□□□□□ -0.89
ERCC1-204ENST00000423698 C17orf100A8MU93 164 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 UBE2L3P68036 154 aaKnown RBP9.5□□□□□ -0.89
ERCC1-204ENST00000423698 WT1-ASQ06250 92 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 SSX8Q7RTT4 187 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 TMEM116Q8NCL8 245 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 OR1N2Q8NGR9 330 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 FLYWCH2Q96CP2 140 aaKnown RBP9.5□□□□□ -0.89
ERCC1-204ENST00000423698 ZNF355PQ9NSJ1 428 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 CELSR2Q9HCU4 2923 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 ITPR1Q14643 2758 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 IGLV3-9A0A075B6K5 115 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 UPK2O00526 184 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 UBE2G1P62253 170 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 BVES-AS1Q5T3Y7 98 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 OR1B1Q8NGR6 318 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 ZNF503Q96F45 646 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 SPXQ9BT56 116 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 GNB1LQ9BYB4 327 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 LSM4Q9Y4Z0 139 aaKnown RBP9.5□□□□□ -0.89
ERCC1-204ENST00000423698 HILPDAQ9Y5L2 63 aa9.5□□□□□ -0.89
ERCC1-204ENST00000423698 Q71RC1 249 aaPredicted RBP9.49□□□□□ -0.89
ERCC1-204ENST00000423698 FAM57AQ8TBR7 257 aa9.49□□□□□ -0.89
ERCC1-204ENST00000423698 HIVEP3Q5T1R4 2406 aa9.49□□□□□ -0.89
ERCC1-204ENST00000423698 IGHV3OR16-8A0A075B7F1 116 aa9.49□□□□□ -0.89
ERCC1-204ENST00000423698 AREGP15514 252 aa9.49□□□□□ -0.89
ERCC1-204ENST00000423698 ZNF331Q9NQX6 463 aaPredicted RBP9.49□□□□□ -0.89
ERCC1-204ENST00000423698 NDUFB3O43676 98 aa9.49□□□□□ -0.89
ERCC1-204ENST00000423698 CX3CL1P78423 397 aa9.49□□□□□ -0.89
ERCC1-204ENST00000423698 LRRC10Q5BKY1 277 aa9.49□□□□□ -0.89
ERCC1-204ENST00000423698 SLC25A48Q6ZT89 311 aaKnown RBP9.49□□□□□ -0.89
ERCC1-204ENST00000423698 OR8B3Q8NGG8 313 aa9.49□□□□□ -0.89
ERCC1-204ENST00000423698 ZFYVE26Q68DK2 2539 aa9.49□□□□□ -0.89
ERCC1-204ENST00000423698 TRAV26-1A0A087WT03 109 aa9.48□□□□□ -0.89
ERCC1-204ENST00000423698 FAM71F2Q6NXP2 309 aa9.48□□□□□ -0.89
ERCC1-204ENST00000423698 SPACA3Q8IXA5 215 aa9.48□□□□□ -0.89
ERCC1-204ENST00000423698 FAM110AQ9BQ89 295 aa9.48□□□□□ -0.89
ERCC1-204ENST00000423698 FOXA2Q9Y261 457 aaPredicted RBP9.48□□□□□ -0.89
ERCC1-204ENST00000423698 GAGE10A6NGK3 116 aa9.48□□□□□ -0.89
ERCC1-204ENST00000423698 COX7A2P2O60397 106 aa9.48□□□□□ -0.89
ERCC1-204ENST00000423698 CSN3P07498 182 aa9.48□□□□□ -0.89
ERCC1-204ENST00000423698 RNASE2P10153 161 aaKnown RBP9.48□□□□□ -0.89
ERCC1-204ENST00000423698 ZNF137PP52743 207 aa9.48□□□□□ -0.89
ERCC1-204ENST00000423698 IBA57Q5T440 356 aaKnown RBP9.48□□□□□ -0.89
ERCC1-204ENST00000423698 GDF5OSQ5U4N7 250 aa9.48□□□□□ -0.89
ERCC1-204ENST00000423698 DPF1Q92782 380 aa9.48□□□□□ -0.89
ERCC1-204ENST00000423698 CHODLQ9H9P2 273 aa9.48□□□□□ -0.89
ERCC1-204ENST00000423698 PRNDQ9UKY0 176 aa9.48□□□□□ -0.89
ERCC1-204ENST00000423698 H0YJW9 148 aa9.47□□□□□ -0.89
ERCC1-204ENST00000423698 TNFRSF1AP19438 455 aa9.47□□□□□ -0.89
ERCC1-204ENST00000423698 PRCDQ00LT1 54 aa9.47□□□□□ -0.89
ERCC1-204ENST00000423698 PLGLAQ15195 96 aa9.47□□□□□ -0.89
ERCC1-204ENST00000423698 PET117Q6UWS5 81 aa9.47□□□□□ -0.89
ERCC1-204ENST00000423698 OR52E5Q8NH55 327 aa9.47□□□□□ -0.89
ERCC1-204ENST00000423698 CACNA1AO00555 2505 aa9.47□□□□□ -0.89
ERCC1-204ENST00000423698 IGHV3-35A0A0C4DH35 117 aa9.47□□□□□ -0.89
ERCC1-204ENST00000423698 FAM231BA6NCW3 169 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms