RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 SYNGR2O43760 224 aa11.86□□□□□ -0.51
CHRD-204ENST00000420973 LSM10Q969L4 123 aaKnown RBP11.86□□□□□ -0.51
CHRD-204ENST00000420973 PTPRBP23467 1997 aa11.86□□□□□ -0.51
CHRD-204ENST00000420973 APELAP0DMC3 54 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 GNG4P50150 75 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 CATR1Q13166 79 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 PPP1R35Q8TAP8 253 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 CYSLTR1Q9Y271 337 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 KMT2EQ8IZD2 1858 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 IGKV1D-17A0A075B6S4 117 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 OOEPA6NGQ2 149 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 NPIPB5A8MRT5 1133 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 CGAP01215 116 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 GRNP28799 593 aaKnown RBP11.85□□□□□ -0.51
CHRD-204ENST00000420973 C18orf32Q8TCD1 76 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 TNFRSF18Q9Y5U5 241 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 TLN2Q9Y4G6 2542 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 DSCAMO60469 2012 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 H0Y980 276 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 HLA-DQA1P01909 254 aa11.85□□□□□ -0.51
CHRD-204ENST00000420973 F11RQ9Y624 299 aaKnown RBP11.85□□□□□ -0.51
CHRD-204ENST00000420973 IGKV1-5P01602 117 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 ZNF146Q15072 292 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 C11orf1Q9H5F2 150 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 IGKV1-39P01597 117 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 IGKV1D-39P04432 117 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 GLRXP35754 106 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 ERVK11-1P61568 191 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 LINC00173Q6ZV60 143 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 C20orf78Q9BR46 151 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 C1QTNF4Q9BXJ3 329 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 RNASE7Q9H1E1 156 aaKnown RBP11.84□□□□□ -0.51
CHRD-204ENST00000420973 SAP30LQ9HAJ7 183 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 HEYLQ9NQ87 328 aaPredicted RBP11.84□□□□□ -0.51
CHRD-204ENST00000420973 SAA2-SAA4A0A096LPE2 208 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 ZG16O60844 167 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 SYT8Q8NBV8 401 aa11.84□□□□□ -0.51
CHRD-204ENST00000420973 A0A1W2PRD5 423 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 A0A1W2PRF3 423 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 A0A1W2PRM7 423 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 CCL21O00585 134 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 REG1AP05451 166 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 ZNF562Q6V9R5 426 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 TMEM136Q6ZRR5 245 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 C8orf86Q6ZUL3 223 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 LINC00473A8K010 186 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 GCSHP23434 173 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 FOXA3P55318 350 aaPredicted RBP11.83□□□□□ -0.52
CHRD-204ENST00000420973 FAM90A1Q86YD7 464 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 GCM1Q9NP62 436 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 RNF7Q9UBF6 113 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 ERG28Q9UKR5 140 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 SYS1-DBNDD2H3BUS1 97 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 M0QXV9 152 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 MT-ATP8P03928 68 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 CCL3L1P16619 93 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 FCGR2BP31994 310 aaPredicted RBP11.83□□□□□ -0.52
CHRD-204ENST00000420973 INSL3P51460 131 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 FOXE3Q13461 319 aa11.83□□□□□ -0.52
CHRD-204ENST00000420973 A0A1B0GWB2 263 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 CEACAM4O75871 244 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 PLAUP00749 431 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 IGHV1-46P01743 117 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 AMY1AP04745 511 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 MYOD1P15172 320 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 RPL31P62899 125 aaKnown RBP11.82□□□□□ -0.52
CHRD-204ENST00000420973 GCSAMLQ5JQS6 135 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 LINC00596Q86U02 117 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 C1orf162Q8NEQ5 155 aaPredicted RBP11.82□□□□□ -0.52
CHRD-204ENST00000420973 SPATA25Q9BR10 227 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 MAP1LC3CQ9BXW4 147 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 IGHV3-72A0A0B4J1Y9 119 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 PPIFP30405 207 aaKnown RBP11.82□□□□□ -0.52
CHRD-204ENST00000420973 MFAP2P55001 183 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 VWC2Q2TAL6 325 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 ZNF585BQ52M93 769 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 Q8NA96 180 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 SPXQ9BT56 116 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 NAV3Q8IVL0 2385 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 SVEP1Q4LDE5 3571 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 PTPN13Q12923 2485 aa11.82□□□□□ -0.52
CHRD-204ENST00000420973 C2orf70A6NJV1 201 aa11.81□□□□□ -0.52
CHRD-204ENST00000420973 NMSQ5H8A3 153 aa11.81□□□□□ -0.52
CHRD-204ENST00000420973 PRR7Q8TB68 274 aa11.81□□□□□ -0.52
CHRD-204ENST00000420973 HLA-DRB1P01911 266 aa11.81□□□□□ -0.52
CHRD-204ENST00000420973 OR4A16Q8NH70 328 aa11.81□□□□□ -0.52
CHRD-204ENST00000420973 SSBP3Q9BWW4 388 aaPredicted RBP11.81□□□□□ -0.52
CHRD-204ENST00000420973 SCRT2Q9NQ03 307 aa11.81□□□□□ -0.52
CHRD-204ENST00000420973 LSM4Q9Y4Z0 139 aaKnown RBP11.81□□□□□ -0.52
CHRD-204ENST00000420973 NOTCH2Q04721 2471 aa11.81□□□□□ -0.52
CHRD-204ENST00000420973 ENSAO43768 121 aaKnown RBP11.81□□□□□ -0.52
CHRD-204ENST00000420973 IGHV3-48P01763 117 aa11.81□□□□□ -0.52
CHRD-204ENST00000420973 GUSBP1Q15486 140 aa11.81□□□□□ -0.52
CHRD-204ENST00000420973 CREBBPQ92793 2442 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 TRAV9-1A0A075B6T8 112 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 IGFL3Q6UXB1 125 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 KCNIP2Q9NS61 270 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 TNFRSF19Q9NS68 423 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 RABAC1Q9UI14 185 aa11.8□□□□□ -0.52
CHRD-204ENST00000420973 TANC2Q9HCD6 1990 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms