RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 NBASA2RRP1 2371 aa9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 LAMA5O15230 3695 aa9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 TCRAP04437 139 aa9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 C3orf79P0CE67 100 aa9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 ZNF25P17030 456 aaPredicted RBP9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 SPACA3Q8IXA5 215 aa9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 PRSS33Q8NF86 280 aa9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 PGLYRP4Q96LB8 373 aa9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 RBM14Q96PK6 669 aaKnown RBP9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 VKORC1Q9BQB6 163 aa9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 CRYGCP07315 174 aa9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 S100A7AQ86SG5 101 aa9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 TLN1Q9Y490 2541 aaKnown RBP9.36□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 HNRNPA3P51991 378 aaKnown RBP9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 Q6ZN92 141 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 PRNTQ86SH4 94 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 TOMM40O96008 361 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 IGLV1-47P01700 117 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 LIPFP07098 398 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 GOLT1AQ6ZVE7 132 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 SCNM1Q9BWG6 230 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 UQCR10Q9UDW1 63 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 RNF24Q9Y225 148 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 HILPDAQ9Y5L2 63 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 MUC6Q6W4X9 2439 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 ANKHD1Q8IWZ3 2542 aaKnown RBP9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 CEP295Q9C0D2 2601 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 HTR1DP28221 377 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 PMCHL1Q16048 86 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 Q56UQ5 140 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 BPIFA4PQ86YQ2 179 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 MBD6Q96DN6 1003 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 ADGRG4Q8IZF6 3080 aa9.35□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 CEACAM3P40198 252 aa9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 MRPL52Q86TS9 123 aaKnown RBP9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 ATOH7Q8N100 152 aa9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 SLC25A39Q9BZJ4 359 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 OTORQ9NRC9 128 aa9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 SOX21Q9Y651 276 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 FOXA3P55318 350 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 C11orf42Q8N5U0 333 aa9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 SPENQ96T58 3664 aaKnown RBP9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 TIMM23O14925 209 aa9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 GP9P14770 177 aa9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 ARF6P62330 175 aa9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 RBPMS2Q6ZRY4 209 aaKnown RBP9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 RAB1BQ9H0U4 201 aa9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 KLF12Q9Y4X4 402 aa9.34□□□□□ -0.91
CSPG4P3Y-201ENST00000418188 MYCNOSP40205 109 aa9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 RNF5Q99942 180 aa9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 TIMM8BQ9Y5J9 83 aaPredicted RBP9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 AKAP13Q12802 2813 aa9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 TRAV8-1A0A0A6YYK1 113 aa9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 IGLC1P0CG04 106 aa9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 ZNF672Q499Z4 452 aaPredicted RBP9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 ALKBH7Q9BT30 221 aaPredicted RBP9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 TPPP3Q9BW30 176 aa9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 C20orf202A1L168 122 aa9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 BTF3P20290 206 aaKnown RBP9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 COL5A1-AS1Q5SY13 56 aa9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 RUSC1-AS1Q66K80 236 aa9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 EXOC3-AS1Q8N2X6 119 aa9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 DPM3Q9P2X0 92 aa9.33□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 A0A1W2PRD5 423 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 A0A1W2PRF3 423 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 A0A1W2PRM7 423 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 GNG7O60262 68 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 FSTL3O95633 263 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 CT45A10P0DMU9 189 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 PLP1P60201 277 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 CT83Q5H943 113 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 PRR31Q5SQ13 230 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 NIT1Q86X76 327 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 RNF114Q9Y508 228 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 CCL21O00585 134 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 LTAP01374 205 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 IL4P05112 153 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 FAM181BA6NEQ2 426 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 TEX22C9J3V5 150 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 LCN12Q6JVE5 192 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 ZNF492Q9P255 531 aa9.32□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 SCGB2A1O75556 95 aa9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 OR2J3O76001 311 aa9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 CRYGBP07316 175 aa9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 GDF5OSQ5U4N7 250 aa9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 CIARTQ8N365 385 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 AAMDCQ9H7C9 122 aa9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 NCBP2LA6PVI3 153 aaKnown RBP9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 NBR2O15453 112 aa9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 CSN1S1P47710 185 aa9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 MRGPRG-AS1Q2M3A8 158 aa9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 ZNF841Q6ZN19 808 aa9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 MLST8Q9BVC4 326 aa9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 FCGR2BP31994 310 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 Q86TA4 180 aa9.31□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 HSBP1L1C9JCN9 74 aa9.3□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 K7ENP7 123 aa9.3□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 CD24P25063 80 aa9.3□□□□□ -0.92
CSPG4P3Y-201ENST00000418188 KLF5Q13887 457 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms