RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 TNCP24821 2201 aa6.28□□□□□ -1.4
VRK2-203ENST00000417641 A6NDN8 102 aa6.27□□□□□ -1.41
VRK2-203ENST00000417641 SMAD7O15105 426 aaKnown RBP6.27□□□□□ -1.41
VRK2-203ENST00000417641 IGHG3P01860 377 aa6.27□□□□□ -1.41
VRK2-203ENST00000417641 APOA2P02652 100 aa6.27□□□□□ -1.41
VRK2-203ENST00000417641 ARMS2P0C7Q2 107 aa6.27□□□□□ -1.41
VRK2-203ENST00000417641 SMIM17P0DL12 118 aa6.27□□□□□ -1.41
VRK2-203ENST00000417641 GATA4P43694 442 aa6.27□□□□□ -1.41
VRK2-203ENST00000417641 ZNF788Q6ZQV5 615 aa6.27□□□□□ -1.41
VRK2-203ENST00000417641 ZNF493Q6ZR52 646 aa6.27□□□□□ -1.41
VRK2-203ENST00000417641 RBMXL3Q8N7X1 1067 aaKnown RBP6.27□□□□□ -1.41
VRK2-203ENST00000417641 C9orf106Q8NAJ2 232 aa6.27□□□□□ -1.41
VRK2-203ENST00000417641 OR9G4Q8NGQ1 327 aa6.27□□□□□ -1.41
VRK2-203ENST00000417641 VSTM2AQ8TAG5 236 aa6.27□□□□□ -1.41
VRK2-203ENST00000417641 DAZAP1Q96EP5 407 aaKnown RBP6.27□□□□□ -1.41
VRK2-203ENST00000417641 U3KQK5 164 aa6.27□□□□□ -1.41
VRK2-203ENST00000417641 TRAV8-1A0A0A6YYK1 113 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 A0A1B0GUT8 65 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 A0A1W2PPM0 123 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 PPIAL4GP0DN37 164 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 ORM2P19652 201 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 COL8A1P27658 744 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 HOXC12P31275 282 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 CSN1S1P47710 185 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 BHLHA15Q7RTS1 189 aaPredicted RBP6.26□□□□□ -1.41
VRK2-203ENST00000417641 OR4X2Q8NGF9 303 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 OR5A1Q8NGJ0 315 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 OTORQ9NRC9 128 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 SLC25A15Q9Y619 301 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 DSCAML1Q8TD84 2053 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 A0A1W2PPI3 338 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 A1L4Q6 167 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 TMEM189A5PLL7 270 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 RIGQ13278 110 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 C8orf46Q8TAG6 207 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 TMEM186Q96B77 213 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 NAA38Q9BRA0 125 aaKnown RBP6.26□□□□□ -1.41
VRK2-203ENST00000417641 ZNF71Q9NQZ8 489 aaPredicted RBP6.26□□□□□ -1.41
VRK2-203ENST00000417641 PLSCR4Q9NRQ2 329 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 JKAMPQ9P055 326 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 TMEM14CQ9P0S9 112 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 HILPDAQ9Y5L2 63 aa6.26□□□□□ -1.41
VRK2-203ENST00000417641 IGLV3-9A0A075B6K5 115 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 A0A1B0GW15 77 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 H3BTX0 84 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 CRIP1P50238 77 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 SUB1P53999 127 aaKnown RBP eCLIP6.25□□□□□ -1.41
VRK2-203ENST00000417641 FA2HQ7L5A8 372 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 FAM216BQ8N7L0 139 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 TMEM116Q8NCL8 245 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 OR10X1Q8NGY0 326 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 PIFOQ8TCI5 191 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 FLYWCH2Q96CP2 140 aaKnown RBP6.25□□□□□ -1.41
VRK2-203ENST00000417641 CCL13Q99616 98 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 RNF7Q9UBF6 113 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 FREM2Q5SZK8 3169 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 DSCAMO60469 2012 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 DYSFO75923 2080 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 IFI27P40305 119 aaPredicted RBP6.25□□□□□ -1.41
VRK2-203ENST00000417641 ZADH2Q8N4Q0 377 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 CNEP1R1Q8N9A8 125 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 SIGLEC8Q9NYZ4 499 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 LINC00312Q9Y6C7 94 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 SELENOKQ9Y6D0 94 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 FRYLO94915 3013 aa6.25□□□□□ -1.41
VRK2-203ENST00000417641 hADV38S2A0JD32 116 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 SPRY3O43610 288 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 FCN3O75636 299 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 DIAPH2-AS1Q14236 149 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 HES3Q5TGS1 186 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 TEX36Q5VZQ5 186 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 PRNTQ86SH4 94 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 PRSS3P2Q8NHM4 247 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 SRSF12Q8WXF0 261 aaKnown RBP6.24□□□□□ -1.41
VRK2-203ENST00000417641 AP1S3Q96PC3 154 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 SPCS1Q9Y6A9 102 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 PRUNE2Q8WUY3 3088 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 PRR14LQ5THK1 2151 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 SCGB1A1P11684 91 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 GLRXP35754 106 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 GOLT1AQ6ZVE7 132 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 PCP2Q8IVA1 136 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 OR4C13Q8NGP0 309 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 PHLDA1Q8WV24 401 aaPredicted RBP6.24□□□□□ -1.41
VRK2-203ENST00000417641 RITA1Q96K30 269 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 C18orf15Q96N68 181 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 TPSG1Q9NRR2 321 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 THYN1Q9P016 225 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 SMPXQ9UHP9 88 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 TIMM8BQ9Y5J9 83 aaPredicted RBP6.24□□□□□ -1.41
VRK2-203ENST00000417641 MED13Q9UHV7 2174 aa6.24□□□□□ -1.41
VRK2-203ENST00000417641 THBDP07204 575 aa6.23□□□□□ -1.41
VRK2-203ENST00000417641 CACNG7P62955 275 aa6.23□□□□□ -1.41
VRK2-203ENST00000417641 C1orf185Q5T7R7 199 aa6.23□□□□□ -1.41
VRK2-203ENST00000417641 PRSS57Q6UWY2 283 aa6.23□□□□□ -1.41
VRK2-203ENST00000417641 EXOC3-AS1Q8N2X6 119 aa6.23□□□□□ -1.41
VRK2-203ENST00000417641 LINC00311Q8N616 119 aa6.23□□□□□ -1.41
VRK2-203ENST00000417641 TMEM75Q8N9X5 138 aa6.23□□□□□ -1.41
VRK2-203ENST00000417641 TMEM178AQ8NBL3 297 aa6.23□□□□□ -1.41
VRK2-203ENST00000417641 DEFB108BQ8NET1 73 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms