RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 PGPA6NDG6 321 aa11.9□□□□□ -0.5
NCKIPSD-204ENST00000416649 PIP4P1Q86T03 277 aa11.9□□□□□ -0.5
NCKIPSD-204ENST00000416649 OR10W1Q8NGF6 305 aa11.9□□□□□ -0.5
NCKIPSD-204ENST00000416649 ATP6V0BQ99437 205 aa11.9□□□□□ -0.5
NCKIPSD-204ENST00000416649 MOSP00540 346 aa11.9□□□□□ -0.5
NCKIPSD-204ENST00000416649 RAB9AP51151 201 aa11.9□□□□□ -0.5
NCKIPSD-204ENST00000416649 SSBP2P81877 361 aaPredicted RBP11.9□□□□□ -0.5
NCKIPSD-204ENST00000416649 NAV3Q8IVL0 2385 aa11.9□□□□□ -0.5
NCKIPSD-204ENST00000416649 C15orf65H3BRN8 121 aa11.9□□□□□ -0.51
NCKIPSD-204ENST00000416649 NDUFS8O00217 210 aa11.9□□□□□ -0.51
NCKIPSD-204ENST00000416649 GCSHP23434 173 aa11.9□□□□□ -0.51
NCKIPSD-204ENST00000416649 MPV17P39210 176 aa11.9□□□□□ -0.51
NCKIPSD-204ENST00000416649 SAMD5Q5TGI4 173 aa11.9□□□□□ -0.51
NCKIPSD-204ENST00000416649 ZNF747Q9BV97 191 aa11.9□□□□□ -0.51
NCKIPSD-204ENST00000416649 PTPRBP23467 1997 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 IGKV3D-15A0A087WSY6 115 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 TMEM238LA0A1B0GVL6 79 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 FAM87AP0C7U9 286 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 C10orf113Q5VZT2 155 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 NEU4Q8WWR8 484 aaPredicted RBP11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 TMEM14BQ9NUH8 114 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 PPIAL4EA0A075B759 164 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 TEX50A0A1B0GTY4 177 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 LYZL6O75951 148 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 AGFG2O95081 481 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 PPIAL4FP0DN26 164 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 CEACAM3P40198 252 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 CSN1S1P47710 185 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 SCGB2A2Q13296 93 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 PSG3Q16557 428 aa11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 ASH1LQ9NR48 2969 aaKnown RBP11.89□□□□□ -0.51
NCKIPSD-204ENST00000416649 PSMB11A5LHX3 300 aa11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 MGST3O14880 152 aa11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 FGF6P10767 208 aa11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 FCGR2BP31994 310 aaPredicted RBP11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 ADAMTSL5Q6ZMM2 481 aa11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 RBPMS2Q6ZRY4 209 aaKnown RBP11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 PDPNQ86YL7 162 aa11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 PCP2Q8IVA1 136 aa11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 IFI27L2Q9H2X8 130 aa11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 INTS1Q8N201 2190 aaKnown RBP11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 GAGE12HA6NDE8 117 aa11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 FAM106CPP0CH98 169 aa11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 CACNG7P62955 275 aa11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 FAM106AQ4KMX7 169 aa11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 GPR82Q96P67 336 aa11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 FOXA2Q9Y261 457 aaPredicted RBP11.88□□□□□ -0.51
NCKIPSD-204ENST00000416649 K7EMI3 77 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 SMIM17P0DL12 118 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 ORM2P19652 201 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 COL8A1P27658 744 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 CKS1BP61024 79 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 WFDC3Q8IUB2 231 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 MTURNQ8N3F0 131 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 C19orf24Q9BVV8 132 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 EPDR1Q9UM22 224 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 IGHV3OR15-7A0A075B7D8 119 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 FNDC10F2Z333 226 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 KLRC4-KLRK1H3BQV0 150 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 K7ERJ3 54 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 CD177Q8N6Q3 437 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 FLYWCH2Q96CP2 140 aaKnown RBP11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 MRPL32Q9BYC8 188 aaKnown RBP11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 C7orf69Q9H7B7 122 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 TRAV26-1A0A087WT03 109 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 TRAV8-1A0A0A6YYK1 113 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 SMAD7O15105 426 aaKnown RBP11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 C11orf53Q8IXP5 236 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 RBMXL3Q8N7X1 1067 aaKnown RBP11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 ASCL2Q99929 193 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 NDFIP1Q9BT67 221 aa11.87□□□□□ -0.51
NCKIPSD-204ENST00000416649 LOXL1Q08397 574 aaPredicted RBP11.86□□□□□ -0.51
NCKIPSD-204ENST00000416649 ZNRF1Q8ND25 227 aa11.86□□□□□ -0.51
NCKIPSD-204ENST00000416649 KLF14Q8TD94 323 aaPredicted RBP11.86□□□□□ -0.51
NCKIPSD-204ENST00000416649 SPRR3Q9UBC9 169 aa11.86□□□□□ -0.51
NCKIPSD-204ENST00000416649 C22orf46C9J442 243 aa11.86□□□□□ -0.51
NCKIPSD-204ENST00000416649 SAA2P0DJI9 122 aaPredicted RBP11.86□□□□□ -0.51
NCKIPSD-204ENST00000416649 PRDX2P32119 198 aa11.86□□□□□ -0.51
NCKIPSD-204ENST00000416649 TIMM23BQ5SRD1 257 aa11.86□□□□□ -0.51
NCKIPSD-204ENST00000416649 ZADH2Q8N4Q0 377 aa11.86□□□□□ -0.51
NCKIPSD-204ENST00000416649 TIMM8AO60220 97 aaPredicted RBP11.85□□□□□ -0.51
NCKIPSD-204ENST00000416649 SMIM13P0DJ93 91 aa11.85□□□□□ -0.51
NCKIPSD-204ENST00000416649 LINC00305Q7Z4B0 112 aa11.85□□□□□ -0.51
NCKIPSD-204ENST00000416649 NPIPB3Q92617 1050 aa11.85□□□□□ -0.51
NCKIPSD-204ENST00000416649 JPT1Q9UK76 154 aa11.85□□□□□ -0.51
NCKIPSD-204ENST00000416649 ZGRF1Q86YA3 2104 aa11.85□□□□□ -0.51
NCKIPSD-204ENST00000416649 IFI27P40305 119 aaPredicted RBP11.85□□□□□ -0.51
NCKIPSD-204ENST00000416649 CD69Q07108 199 aa11.85□□□□□ -0.51
NCKIPSD-204ENST00000416649 CD300EQ496F6 205 aaPredicted RBP11.85□□□□□ -0.51
NCKIPSD-204ENST00000416649 CIARTQ8N365 385 aaPredicted RBP11.85□□□□□ -0.51
NCKIPSD-204ENST00000416649 MDS2Q8NDY4 140 aa11.85□□□□□ -0.51
NCKIPSD-204ENST00000416649 INSIG2Q9Y5U4 225 aa11.85□□□□□ -0.51
NCKIPSD-204ENST00000416649 TM4SF5O14894 197 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 IGKV1-16P04430 117 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 WFDC2Q14508 124 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 PATE2Q6UY27 113 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 SH2D6Q7Z4S9 175 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 BOD1L2Q8IYS8 172 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 RND1Q92730 232 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms