RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 TMEM50AO95807 157 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 SLC25A4P12235 298 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 F2RP25116 425 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 H2BFSP57053 126 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 HERV-K104P61576 105 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 CYCSP99999 105 aaKnown RBP6.61□□□□□ -1.35
LINC01238-201ENST00000416204 MSMO1Q15800 293 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 MLANAQ16655 118 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 TEX261Q6UWH6 196 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 COQ8AQ8NI60 647 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 MRGPRFQ96AM1 343 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 METTL26Q96S19 204 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 U3KQ87 197 aa6.61□□□□□ -1.35
LINC01238-201ENST00000416204 H3BMM0 161 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 TSC22D2O75157 780 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 SFT2D2O95562 160 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 PRM2P04554 102 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 FGF2P09038 288 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 NPBWR1P48145 328 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 PPP1R1AQ13522 171 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 OPCMLQ14982 345 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 TIGITQ495A1 244 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 PHLDA2Q53GA4 152 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 GDF5OSQ5U4N7 250 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 ZNF705AQ6ZN79 300 aaPredicted RBP6.6□□□□□ -1.35
LINC01238-201ENST00000416204 ZNF680Q8NEM1 530 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 OR4A16Q8NH70 328 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 MARCH1Q8TCQ1 289 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 TMEM230Q96A57 120 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 ZNF2Q9BSG1 426 aaPredicted RBP6.6□□□□□ -1.35
LINC01238-201ENST00000416204 EHFQ9NZC4 300 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 C14orf166Q9Y224 244 aaKnown RBP6.6□□□□□ -1.35
LINC01238-201ENST00000416204 RFNGQ9Y644 331 aa6.6□□□□□ -1.35
LINC01238-201ENST00000416204 A0A0D9SG52 128 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 RPS10-NUDT3A0A1W2PQS6 291 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 A0A1W2PS18 150 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 ZNF705FA8MVS1 300 aaPredicted RBP6.59□□□□□ -1.35
LINC01238-201ENST00000416204 FAM90A26D6RGX4 464 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 NUDT3O95989 172 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 ZNF705DP0CH99 300 aaPredicted RBP6.59□□□□□ -1.35
LINC01238-201ENST00000416204 ZNF705BP0CI00 300 aaPredicted RBP6.59□□□□□ -1.35
LINC01238-201ENST00000416204 CRYBB3P26998 211 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 S100A11P31949 105 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 HTR2BP41595 481 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 UCP3P55916 312 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 NUTF2P61970 127 aaKnown RBP6.59□□□□□ -1.35
LINC01238-201ENST00000416204 PRCDQ00LT1 54 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 ZNF345Q14585 488 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 DHRS11Q6UWP2 260 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 SLC7A5P1Q8MH63 180 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 ZNRF2Q8NHG8 242 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 FAM210BQ96KR6 192 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 RTBDNQ9BSG5 229 aaPredicted RBP6.59□□□□□ -1.35
LINC01238-201ENST00000416204 PDCD10Q9BUL8 212 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 C1QTNF4Q9BXJ3 329 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 NMES1Q9C002 83 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 FXYD6Q9H0Q3 95 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 FKBP11Q9NYL4 201 aa6.59□□□□□ -1.35
LINC01238-201ENST00000416204 YTHDF2Q9Y5A9 579 aaKnown RBP6.59□□□□□ -1.35
LINC01238-201ENST00000416204 HMCN2Q8NDA2 5059 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 LOC102723971A0A1B0GUV8 181 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 LINC00862A6NCI5 91 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 SIX6O95475 246 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 IGKV1-39P01597 117 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 IGKV1D-39P04432 117 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 PGAM2P15259 253 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 AKR1C4P17516 323 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 CXCL2P19875 107 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 VAMP1P23763 118 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 RAB14P61106 215 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 DAD1P61803 113 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 OR2F1Q13607 317 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 TMUB2Q71RG4 321 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 H2BFWTQ7Z2G1 175 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 ZNF114Q8NC26 417 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 NARS2Q96I59 477 aaKnown RBP6.58□□□□□ -1.36
LINC01238-201ENST00000416204 SLC35B3Q9H1N7 401 aa6.58□□□□□ -1.36
LINC01238-201ENST00000416204 FNDC4Q9H6D8 234 aaPredicted RBP6.58□□□□□ -1.36
LINC01238-201ENST00000416204 FXYD6-FXYD2A0A087WZ82 144 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 PIGBOS1A0A0B4J2F0 54 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 TMEM189A5PLL7 270 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 ARPC5O15511 151 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 MPC2O95563 127 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 IGKV1-17P01599 117 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 HLA-DRB4P13762 266 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 SNCAP37840 140 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 OPRK1P41145 380 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 HSPE1P61604 102 aaKnown RBP6.57□□□□□ -1.36
LINC01238-201ENST00000416204 SNRPD3P62318 126 aaKnown RBP6.57□□□□□ -1.36
LINC01238-201ENST00000416204 ERHP84090 104 aaKnown RBP6.57□□□□□ -1.36
LINC01238-201ENST00000416204 CLLU1Q5K131 121 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 C16orf54Q6UWD8 224 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 ZNF546Q86UE3 836 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 SLC51BQ86UW2 128 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 OR4B1Q8NGF8 309 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 THAP6Q8TBB0 222 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 GLMPQ8WWB7 406 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 SEC22AQ96IW7 307 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 LINC00052Q96N35 136 aa6.57□□□□□ -1.36
LINC01238-201ENST00000416204 NEU1Q99519 415 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms