RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PMCHL1Q16048 86 aa9.24□□□□□ -0.93
RFFL-205ENST00000415395 COL5A1-AS1Q5SY13 56 aa9.24□□□□□ -0.93
RFFL-205ENST00000415395 TMEM190Q8WZ59 177 aa9.24□□□□□ -0.93
RFFL-205ENST00000415395 NRGNQ92686 78 aa9.24□□□□□ -0.93
RFFL-205ENST00000415395 IGF2BP2-AS1Q96M15 143 aa9.24□□□□□ -0.93
RFFL-205ENST00000415395 PSMG3-AS1Q96PY0 264 aa9.24□□□□□ -0.93
RFFL-205ENST00000415395 DNAJC4Q9NNZ3 241 aa9.24□□□□□ -0.93
RFFL-205ENST00000415395 UQCR10Q9UDW1 63 aa9.24□□□□□ -0.93
RFFL-205ENST00000415395 PAM16Q9Y3D7 125 aa9.24□□□□□ -0.93
RFFL-205ENST00000415395 C20orf202A1L168 122 aa9.23□□□□□ -0.93
RFFL-205ENST00000415395 ZNF324O75467 553 aaPredicted RBP9.23□□□□□ -0.93
RFFL-205ENST00000415395 COL8A1P27658 744 aa9.23□□□□□ -0.93
RFFL-205ENST00000415395 LINC00310P59036 64 aa9.23□□□□□ -0.93
RFFL-205ENST00000415395 RPL8P62917 257 aaKnown RBP9.23□□□□□ -0.93
RFFL-205ENST00000415395 ETFRF1Q6IPR1 90 aa9.23□□□□□ -0.93
RFFL-205ENST00000415395 MBD6Q96DN6 1003 aa9.23□□□□□ -0.93
RFFL-205ENST00000415395 GRAMD2BQ96HH9 432 aa9.23□□□□□ -0.93
RFFL-205ENST00000415395 TMEM68Q96MH6 324 aa9.23□□□□□ -0.93
RFFL-205ENST00000415395 ZNF430Q9H8G1 570 aaPredicted RBP9.23□□□□□ -0.93
RFFL-205ENST00000415395 NRN1Q9NPD7 142 aa9.23□□□□□ -0.93
RFFL-205ENST00000415395 GGTLC3B5MD39 225 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 LINC00614P0C842 121 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 HIST1H1EP10412 219 aaKnown RBP9.22□□□□□ -0.93
RFFL-205ENST00000415395 GATA3P23771 443 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 PRB3Q04118 309 aaPredicted RBP9.22□□□□□ -0.93
RFFL-205ENST00000415395 DEFB113Q30KQ7 82 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 LDLRAD2Q5SZI1 272 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 C10orf113Q5VZT2 155 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 CRYBG3Q68DQ2 2970 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 CYB5R2Q6BCY4 276 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 ATP5L2Q7Z4Y8 100 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 C22orf15Q8WYQ4 148 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 CFHR4Q92496 578 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 ATG101Q9BSB4 218 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 RNASE7Q9H1E1 156 aaKnown RBP9.22□□□□□ -0.93
RFFL-205ENST00000415395 TACC2O95359 2948 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 WNK2Q9Y3S1 2297 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 SPG11Q96JI7 2443 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 ABCA2Q9BZC7 2435 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 B4DSR2 109 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 TIMM23O14925 209 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 DLEU1O43261 78 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 CRYGBP07316 175 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 MSMBP08118 114 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 G0S2P27469 103 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 SRIP30626 198 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 FAM103A1Q9BTL3 118 aaKnown RBP9.22□□□□□ -0.93
RFFL-205ENST00000415395 PAXXQ9BUH6 204 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 NDUFA4L2Q9NRX3 87 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 FBXL7Q9UJT9 491 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 GOLT1BQ9Y3E0 138 aa9.22□□□□□ -0.93
RFFL-205ENST00000415395 ANKRD17O75179 2603 aaKnown RBP9.22□□□□□ -0.93
RFFL-205ENST00000415395 IGHV3-72A0A0B4J1Y9 119 aa9.21□□□□□ -0.94
RFFL-205ENST00000415395 A0A1W2PS18 150 aa9.21□□□□□ -0.94
RFFL-205ENST00000415395 SLC25A17O43808 307 aa9.21□□□□□ -0.94
RFFL-205ENST00000415395 PMCHP20382 165 aa9.21□□□□□ -0.94
RFFL-205ENST00000415395 KRTAP10-9P60411 292 aa9.21□□□□□ -0.94
RFFL-205ENST00000415395 FXYD3Q14802 87 aa9.21□□□□□ -0.94
RFFL-205ENST00000415395 SPATA45Q537H7 98 aa9.21□□□□□ -0.94
RFFL-205ENST00000415395 PRSS57Q6UWY2 283 aa9.21□□□□□ -0.94
RFFL-205ENST00000415395 LHFPL4Q7Z7J7 247 aa9.21□□□□□ -0.94
RFFL-205ENST00000415395 ZNF503Q96F45 646 aa9.21□□□□□ -0.94
RFFL-205ENST00000415395 RBM14Q96PK6 669 aaKnown RBP9.21□□□□□ -0.94
RFFL-205ENST00000415395 SOX21Q9Y651 276 aaPredicted RBP9.21□□□□□ -0.94
RFFL-205ENST00000415395 TNCP24821 2201 aa9.2□□□□□ -0.94
RFFL-205ENST00000415395 TENM4Q6N022 2769 aa9.2□□□□□ -0.94
RFFL-205ENST00000415395 A0A096LNT2 108 aa9.2□□□□□ -0.94
RFFL-205ENST00000415395 TCRBV4S1A1TA0A5B7 111 aa9.2□□□□□ -0.94
RFFL-205ENST00000415395 BMPR1BO00238 502 aa9.2□□□□□ -0.94
RFFL-205ENST00000415395 PEX7O00628 323 aa9.2□□□□□ -0.94
RFFL-205ENST00000415395 MOSP00540 346 aa9.2□□□□□ -0.94
RFFL-205ENST00000415395 IGLV2-8P01709 118 aa9.2□□□□□ -0.94
RFFL-205ENST00000415395 UBE2G1P62253 170 aa9.2□□□□□ -0.94
RFFL-205ENST00000415395 LOXL1Q08397 574 aaPredicted RBP9.2□□□□□ -0.94
RFFL-205ENST00000415395 EBI3Q14213 229 aa9.2□□□□□ -0.94
RFFL-205ENST00000415395 MRPL54Q6P161 138 aaKnown RBP9.2□□□□□ -0.94
RFFL-205ENST00000415395 SLC25A2Q9BXI2 301 aa9.2□□□□□ -0.94
RFFL-205ENST00000415395 SIGLEC9Q9Y336 463 aa9.2□□□□□ -0.94
RFFL-205ENST00000415395 HILPDAQ9Y5L2 63 aa9.2□□□□□ -0.94
RFFL-205ENST00000415395 IGKV1OR2-108A0A075B7D4 117 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 COMPP49747 757 aaPredicted RBP9.19□□□□□ -0.94
RFFL-205ENST00000415395 HNRNPA3P51991 378 aaKnown RBP9.19□□□□□ -0.94
RFFL-205ENST00000415395 TCL1AP56279 114 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 KLF5Q13887 457 aaPredicted RBP9.19□□□□□ -0.94
RFFL-205ENST00000415395 THAP8Q8NA92 274 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 NPBQ8NG41 125 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 TXN2Q99757 166 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 TMEM208Q9BTX3 173 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 FBN2P35556 2912 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 DOPEY2Q9Y3R5 2298 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 NPFFO15130 113 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 HSBP1O75506 76 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 NDUFA3O95167 84 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 MRGPRG-AS1Q2M3A8 158 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 ZNF329Q86UD4 541 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 PPP1R27Q86WC6 154 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 LINC01356Q8N9X3 169 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 RITA1Q96K30 269 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 FAM167A-AS1Q96KT0 104 aa9.19□□□□□ -0.94
RFFL-205ENST00000415395 ZNF355PQ9NSJ1 428 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms