RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 Q96M66 194 aa16.57■□□□□ 0.24
AP1S3-205ENST00000415298 DEFA4P12838 97 aa16.57■□□□□ 0.24
AP1S3-205ENST00000415298 B4GALT1P15291 398 aa16.57■□□□□ 0.24
AP1S3-205ENST00000415298 GLRXP35754 106 aa16.57■□□□□ 0.24
AP1S3-205ENST00000415298 OPRK1P41145 380 aa16.57■□□□□ 0.24
AP1S3-205ENST00000415298 PRR14LQ5THK1 2151 aa16.57■□□□□ 0.24
AP1S3-205ENST00000415298 FAM159AQ6UWV7 190 aa16.57■□□□□ 0.24
AP1S3-205ENST00000415298 ZDHHC23Q8IYP9 409 aa16.57■□□□□ 0.24
AP1S3-205ENST00000415298 NABP1Q96AH0 204 aa16.57■□□□□ 0.24
AP1S3-205ENST00000415298 TMEM147Q9BVK8 224 aa16.57■□□□□ 0.24
AP1S3-205ENST00000415298 A0A0G2JNJ9 132 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 PATE4P0C8F1 98 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 TCTAP57738 103 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 GAGE2BQ13066 116 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 GAGE2EQ4V326 116 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 C11orf52Q96A22 123 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 GAGE2DQ9UEU5 116 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 Q9UFV3 132 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 DUSP13Q9UII6 198 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 SIGLEC9Q9Y336 463 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 DIDO1Q9BTC0 2240 aaKnown RBP16.56■□□□□ 0.24
AP1S3-205ENST00000415298 A0A096LPE4 126 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 A0A1W2PPZ6 126 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 FXYD3Q14802 87 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 ATP23Q9Y6H3 246 aa16.56■□□□□ 0.24
AP1S3-205ENST00000415298 TRAV5A0A0B4J249 113 aa16.55■□□□□ 0.24
AP1S3-205ENST00000415298 PPIFP30405 207 aaKnown RBP16.55■□□□□ 0.24
AP1S3-205ENST00000415298 RTL8BQ17RB0 113 aa16.55■□□□□ 0.24
AP1S3-205ENST00000415298 CRIP3Q6Q6R5 217 aa16.55■□□□□ 0.24
AP1S3-205ENST00000415298 C8orf46Q8TAG6 207 aa16.55■□□□□ 0.24
AP1S3-205ENST00000415298 IL1F10Q8WWZ1 152 aa16.55■□□□□ 0.24
AP1S3-205ENST00000415298 FOXB1Q99853 325 aa16.55■□□□□ 0.24
AP1S3-205ENST00000415298 NPCDR1Q9BY65 106 aa16.55■□□□□ 0.24
AP1S3-205ENST00000415298 RNASE7Q9H1E1 156 aaKnown RBP16.55■□□□□ 0.24
AP1S3-205ENST00000415298 ZNF818PQ6ZRF7 136 aa16.55■□□□□ 0.24
AP1S3-205ENST00000415298 GAPTQ8N292 157 aa16.55■□□□□ 0.24
AP1S3-205ENST00000415298 OR5AN1Q8NGI8 311 aa16.55■□□□□ 0.24
AP1S3-205ENST00000415298 FGFBP3Q8TAT2 258 aa16.55■□□□□ 0.24
AP1S3-205ENST00000415298 PIMREGQ9BSJ6 248 aa16.55■□□□□ 0.24
AP1S3-205ENST00000415298 IGLL5B9A064 214 aa16.54■□□□□ 0.24
AP1S3-205ENST00000415298 EVI2AP22794 236 aa16.54■□□□□ 0.24
AP1S3-205ENST00000415298 DUX5Q96PT3 197 aa16.54■□□□□ 0.24
AP1S3-205ENST00000415298 TEX50A0A1B0GTY4 177 aa16.54■□□□□ 0.24
AP1S3-205ENST00000415298 TMEM14EPQ6UXP3 125 aa16.54■□□□□ 0.24
AP1S3-205ENST00000415298 KMT2BQ9UMN6 2715 aaPredicted RBP16.54■□□□□ 0.24
AP1S3-205ENST00000415298 IBA57Q5T440 356 aaKnown RBP16.53■□□□□ 0.24
AP1S3-205ENST00000415298 NFE4Q86UQ8 179 aa16.53■□□□□ 0.24
AP1S3-205ENST00000415298 OSR2Q8N2R0 312 aa16.53■□□□□ 0.24
AP1S3-205ENST00000415298 GPHA2Q96T91 129 aa16.53■□□□□ 0.24
AP1S3-205ENST00000415298 HIVEP3Q5T1R4 2406 aa16.53■□□□□ 0.24
AP1S3-205ENST00000415298 LYZL6O75951 148 aa16.53■□□□□ 0.24
AP1S3-205ENST00000415298 CLDN14O95500 239 aa16.53■□□□□ 0.24
AP1S3-205ENST00000415298 IGHV1-2P23083 117 aa16.53■□□□□ 0.24
AP1S3-205ENST00000415298 GCSHP23434 173 aa16.53■□□□□ 0.24
AP1S3-205ENST00000415298 FXYD2P54710 66 aa16.53■□□□□ 0.24
AP1S3-205ENST00000415298 K7ERJ3 54 aa16.52■□□□□ 0.24
AP1S3-205ENST00000415298 MOSP00540 346 aa16.52■□□□□ 0.24
AP1S3-205ENST00000415298 GDF5OSQ5U4N7 250 aa16.52■□□□□ 0.24
AP1S3-205ENST00000415298 Q6ZRM9 215 aa16.52■□□□□ 0.24
AP1S3-205ENST00000415298 FOXL2NBQ6ZUU3 175 aa16.52■□□□□ 0.24
AP1S3-205ENST00000415298 CACNG5Q9UF02 275 aa16.52■□□□□ 0.24
AP1S3-205ENST00000415298 PROCRQ9UNN8 238 aa16.52■□□□□ 0.24
AP1S3-205ENST00000415298 ZNF503-AS2A6NEH8 195 aa16.52■□□□□ 0.23
AP1S3-205ENST00000415298 CCL21O00585 134 aa16.52■□□□□ 0.23
AP1S3-205ENST00000415298 ZNF718Q3SXZ3 478 aa16.52■□□□□ 0.23
AP1S3-205ENST00000415298 ZNF474Q6S9Z5 364 aaPredicted RBP16.52■□□□□ 0.23
AP1S3-205ENST00000415298 KIR2DL4Q99706 377 aa16.52■□□□□ 0.23
AP1S3-205ENST00000415298 CHD6Q8TD26 2715 aa16.51■□□□□ 0.23
AP1S3-205ENST00000415298 TFF3Q07654 80 aa16.51■□□□□ 0.23
AP1S3-205ENST00000415298 AMTNQ6UX39 209 aa16.51■□□□□ 0.23
AP1S3-205ENST00000415298 PRR7Q8TB68 274 aa16.51■□□□□ 0.23
AP1S3-205ENST00000415298 VKORC1Q9BQB6 163 aa16.51■□□□□ 0.23
AP1S3-205ENST00000415298 TMEM262E9PQX1 116 aa16.51■□□□□ 0.23
AP1S3-205ENST00000415298 FAM27BQ5VT28 67 aa16.51■□□□□ 0.23
AP1S3-205ENST00000415298 Q6ZT83 130 aa16.51■□□□□ 0.23
AP1S3-205ENST00000415298 BCL6BQ8N143 479 aaPredicted RBP16.51■□□□□ 0.23
AP1S3-205ENST00000415298 TMEM116Q8NCL8 245 aa16.51■□□□□ 0.23
AP1S3-205ENST00000415298 RBP4P02753 201 aa16.5■□□□□ 0.23
AP1S3-205ENST00000415298 GNLYP22749 145 aa16.5■□□□□ 0.23
AP1S3-205ENST00000415298 IZUMO4Q1ZYL8 232 aa16.5■□□□□ 0.23
AP1S3-205ENST00000415298 TM4SF20Q53R12 229 aa16.5■□□□□ 0.23
AP1S3-205ENST00000415298 MFAP2P55001 183 aa16.5■□□□□ 0.23
AP1S3-205ENST00000415298 CENPWQ5EE01 88 aa16.5■□□□□ 0.23
AP1S3-205ENST00000415298 RPEQ96AT9 228 aa16.5■□□□□ 0.23
AP1S3-205ENST00000415298 YTHDF2Q9Y5A9 579 aaKnown RBP16.5■□□□□ 0.23
AP1S3-205ENST00000415298 COL12A1Q99715 3063 aa16.49■□□□□ 0.23
AP1S3-205ENST00000415298 ARL14EPLP0DKL9 152 aa16.49■□□□□ 0.23
AP1S3-205ENST00000415298 RND1Q92730 232 aa16.49■□□□□ 0.23
AP1S3-205ENST00000415298 ENY2Q9NPA8 101 aa16.49■□□□□ 0.23
AP1S3-205ENST00000415298 CXorf67Q86X51 503 aaPredicted RBP16.49■□□□□ 0.23
AP1S3-205ENST00000415298 PPDPFLQ8WWR9 84 aa16.49■□□□□ 0.23
AP1S3-205ENST00000415298 KIR2DS1A0A191URI9 304 aa16.48■□□□□ 0.23
AP1S3-205ENST00000415298 ZNF32P17041 273 aa16.48■□□□□ 0.23
AP1S3-205ENST00000415298 CCL1P22362 96 aa16.48■□□□□ 0.23
AP1S3-205ENST00000415298 KIR2DS1Q14954 304 aa16.48■□□□□ 0.23
AP1S3-205ENST00000415298 ZNF843Q8N446 348 aa16.48■□□□□ 0.23
AP1S3-205ENST00000415298 ZNF462Q96JM2 2506 aa16.48■□□□□ 0.23
AP1S3-205ENST00000415298 FAM90A18PA6NE21 464 aa16.48■□□□□ 0.23
AP1S3-205ENST00000415298 FAM90A16PA6NEW6 464 aa16.48■□□□□ 0.23
AP1S3-205ENST00000415298 FAM90A8PA6NJQ4 464 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms