RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 C20orf24Q9BUV8 137 aa5.18□□□□□ -1.58
LINC00343-201ENST00000414368 RNF126Q9BV68 326 aa5.18□□□□□ -1.58
LINC00343-201ENST00000414368 TM2D2Q9BX73 214 aa5.18□□□□□ -1.58
LINC00343-201ENST00000414368 COX11Q9Y6N1 276 aa5.18□□□□□ -1.58
LINC00343-201ENST00000414368 IGKV1OR2-108A0A075B7D4 117 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 IGHV3-49A0A0A0MS15 119 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 IGSF23A1L1A6 192 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 TMEM213A2RRL7 107 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 C2orf70A6NJV1 201 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 LGALS9O00182 355 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 MPC2O95563 127 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 IGLC1P0CG04 106 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 SLC25A4P12235 298 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 LYL1P12980 280 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 PVALBP20472 110 aaPredicted RBP5.17□□□□□ -1.58
LINC00343-201ENST00000414368 KRTAP10-11P60412 298 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 CYCSP99999 105 aaKnown RBP5.17□□□□□ -1.58
LINC00343-201ENST00000414368 ZNF90Q03938 601 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 Q5BKY6 102 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 C9orf66Q5T8R8 295 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 ETFRF1Q6IPR1 90 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 TOMM20LQ6UXN7 152 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 ACOT7LQ6ZUV0 252 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 TMEM217Q8N7C4 229 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 TMEM190Q8WZ59 177 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 SLC35E1Q96K37 410 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 MCRIP2Q9BUT9 160 aaKnown RBP5.17□□□□□ -1.58
LINC00343-201ENST00000414368 ZNF436Q9C0F3 470 aaPredicted RBP5.17□□□□□ -1.58
LINC00343-201ENST00000414368 LYRM2Q9NU23 88 aaPredicted RBP5.17□□□□□ -1.58
LINC00343-201ENST00000414368 PUS1Q9Y606 427 aaKnown RBP eCLIP5.17□□□□□ -1.58
LINC00343-201ENST00000414368 TGP01266 2768 aa5.17□□□□□ -1.58
LINC00343-201ENST00000414368 DNAH3Q8TD57 4116 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 IGKV1D-37A0A075B6S9 117 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 IGHV3OR16-13A0A075B7E8 117 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 TRAV30A0A087WSZ9 112 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 TRAV14DV4A0A0A6YYC5 116 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 IGHV3-74A0A0B4J1X5 117 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 SMCO3A2RU48 225 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 IZUMO1RA6ND01 250 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 ZFP92A6NM28 416 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 NDUFA4O00483 81 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 APOHP02749 345 aaPredicted RBP5.16□□□□□ -1.58
LINC00343-201ENST00000414368 RLN2P04090 185 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 PSG1P11464 419 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 FOLR2P14207 255 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 CBLN1P23435 193 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 AKR1C1Q04828 323 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 RELQ04864 619 aaPredicted RBP5.16□□□□□ -1.58
LINC00343-201ENST00000414368 OR2F1Q13607 317 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 ZNF600Q6ZNG1 722 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 TMEM182Q6ZP80 229 aaPredicted RBP5.16□□□□□ -1.58
LINC00343-201ENST00000414368 TMEM252Q8N6L7 170 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 OR10P1Q8NGE3 313 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 OR1S2Q8NGQ3 325 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 MBD2Q9UBB5 411 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 PEMTQ9UBM1 199 aa5.16□□□□□ -1.58
LINC00343-201ENST00000414368 IGHV3-66A0A0C4DH42 116 aa5.15□□□□□ -1.59
LINC00343-201ENST00000414368 A8MWP6 167 aa5.15□□□□□ -1.59
LINC00343-201ENST00000414368 E5RGE8 158 aa5.15□□□□□ -1.59
LINC00343-201ENST00000414368 SMLR1H3BR10 107 aa5.15□□□□□ -1.59
LINC00343-201ENST00000414368 IGLV1-51P01701 117 aa5.15□□□□□ -1.59
LINC00343-201ENST00000414368 RD3LP0DJH9 198 aa5.15□□□□□ -1.59
LINC00343-201ENST00000414368 GATA2P23769 480 aaPredicted RBP5.15□□□□□ -1.59
LINC00343-201ENST00000414368 P2RY1P47900 373 aa5.15□□□□□ -1.59
LINC00343-201ENST00000414368 SULT1A1P50225 295 aa5.15□□□□□ -1.59
LINC00343-201ENST00000414368 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
LINC00343-201ENST00000414368 YPEL3P61236 119 aaPredicted RBP5.15□□□□□ -1.59
LINC00343-201ENST00000414368 SLC38A11Q08AI6 406 aa5.15□□□□□ -1.59
LINC00343-201ENST00000414368 KPRPQ5T749 579 aaPredicted RBP5.15□□□□□ -1.59
LINC00343-201ENST00000414368 THAP8Q8NA92 274 aa5.15□□□□□ -1.59
LINC00343-201ENST00000414368 DAZ1Q9NQZ3 744 aaKnown RBP5.15□□□□□ -1.59
LINC00343-201ENST00000414368 MLXQ9UH92 298 aa5.15□□□□□ -1.59
LINC00343-201ENST00000414368 UFC1Q9Y3C8 167 aa5.15□□□□□ -1.59
LINC00343-201ENST00000414368 NBEAL2Q6ZNJ1 2754 aa5.15□□□□□ -1.59
LINC00343-201ENST00000414368 K7EMT4 169 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 TOMM40O96008 361 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 IL4P05112 153 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 GIPP09681 153 aaPredicted RBP5.14□□□□□ -1.59
LINC00343-201ENST00000414368 C8orf88P0DMB2 117 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 INSL3P51460 131 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 DLK1P80370 383 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 DEFA6Q01524 100 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 EWSR1Q01844 656 aaKnown RBP eCLIP5.14□□□□□ -1.59
LINC00343-201ENST00000414368 EGFEM1PQ0D2K5 195 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 CLINT1Q14677 625 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 USF2Q15853 346 aaPredicted RBP5.14□□□□□ -1.59
LINC00343-201ENST00000414368 DEFB114Q30KQ6 69 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 BTNL8Q6UX41 500 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 TMEM144Q7Z5S9 345 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 STX12Q86Y82 276 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 OR51G1Q8NGK1 321 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 DYNLRB2Q8TF09 96 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 Q8WTZ3 238 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 TRGV9Q99603 122 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 RHPN1-AS1Q9BWJ2 59 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 GPR61Q9BZJ8 451 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 SMIM3Q9BZL3 60 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 CTDSP1Q9GZU7 261 aa5.14□□□□□ -1.59
LINC00343-201ENST00000414368 SLC25A31Q9H0C2 315 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms