RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 IGLC1P0CG04 106 aa12.98□□□□□ -0.33
SCAMP4-204ENST00000414057 CDC34P49427 236 aaPredicted RBP12.98□□□□□ -0.33
SCAMP4-204ENST00000414057 PFDN5Q99471 154 aa12.98□□□□□ -0.33
SCAMP4-204ENST00000414057 IGHV3-21A0A0B4J1V1 117 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 A0A1W2PPV4 95 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 MFSD2BA6NFX1 497 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 NDUFB8O95169 186 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 IGHV3-48P01763 117 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 RHOBP62745 196 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 RHOGP84095 191 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 UQCC3Q6UW78 93 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 OR1L4Q8NGR5 311 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 GATAD1Q8WUU5 269 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 SFT2D1Q8WV19 159 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 TRBV7-1A0A0A6YYK4 115 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 MAP1LC3B2A6NCE7 125 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 GNG7O60262 68 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 TPPP2P59282 170 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 ZNF726P1Q15940 193 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 C15orf32Q32M92 178 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 USMG5Q96IX5 58 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 PRR25Q96S07 402 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 MAP1LC3BQ9GZQ8 125 aa12.97□□□□□ -0.33
SCAMP4-204ENST00000414057 ELOA3CA0A087WX78 387 aaPredicted RBP12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 SAP30O75446 220 aa12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 HSPB1P04792 205 aaKnown RBP12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 S100A1P23297 94 aa12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 PLP1P60201 277 aa12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 YPEL3P61236 119 aaPredicted RBP12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 ZNF90Q03938 601 aa12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 PMS2P11Q13670 270 aa12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 FAM122CQ6P4D5 195 aa12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 SPSB3Q6PJ21 355 aa12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 RAB24Q969Q5 203 aa12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 EEF1AKMT3Q96AZ1 226 aa12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 PBDC1Q9BVG4 233 aa12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 MRPL32Q9BYC8 188 aaKnown RBP12.96□□□□□ -0.34
SCAMP4-204ENST00000414057 A0A0G2JLM5 398 aa12.95□□□□□ -0.34
SCAMP4-204ENST00000414057 TRGV3P03979 118 aa12.95□□□□□ -0.34
SCAMP4-204ENST00000414057 ATP5G2Q06055 141 aa12.95□□□□□ -0.34
SCAMP4-204ENST00000414057 Q56UQ5 140 aa12.95□□□□□ -0.34
SCAMP4-204ENST00000414057 ZNF502Q8TBZ5 544 aa12.95□□□□□ -0.34
SCAMP4-204ENST00000414057 DLX4Q92988 240 aaPredicted RBP12.95□□□□□ -0.34
SCAMP4-204ENST00000414057 WWC2-AS2Q96NR7 200 aa12.95□□□□□ -0.34
SCAMP4-204ENST00000414057 MS4A10Q96PG2 267 aa12.95□□□□□ -0.34
SCAMP4-204ENST00000414057 SLC25A22Q9H936 323 aa12.95□□□□□ -0.34
SCAMP4-204ENST00000414057 TOMM40O96008 361 aa12.94□□□□□ -0.34
SCAMP4-204ENST00000414057 IGKV1-17P01599 117 aa12.94□□□□□ -0.34
SCAMP4-204ENST00000414057 OR5G3P0C626 314 aa12.94□□□□□ -0.34
SCAMP4-204ENST00000414057 GCSAMLQ5JQS6 135 aa12.94□□□□□ -0.34
SCAMP4-204ENST00000414057 FAM209BQ5JX69 171 aa12.94□□□□□ -0.34
SCAMP4-204ENST00000414057 FAM210AQ96ND0 272 aa12.94□□□□□ -0.34
SCAMP4-204ENST00000414057 CITED4Q96RK1 184 aa12.94□□□□□ -0.34
SCAMP4-204ENST00000414057 SMDT1Q9H4I9 107 aa12.94□□□□□ -0.34
SCAMP4-204ENST00000414057 DNAJC4Q9NNZ3 241 aa12.94□□□□□ -0.34
SCAMP4-204ENST00000414057 FUT9Q9Y231 359 aa12.94□□□□□ -0.34
SCAMP4-204ENST00000414057 SMAD5-AS1Q9Y6J3 95 aa12.94□□□□□ -0.34
SCAMP4-204ENST00000414057 IGHV4OR15-8A0A075B7B6 117 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 A0A087WW49 117 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 F8W735 103 aaPredicted RBP12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 COX7A2P2O60397 106 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 IGHV3-11P01762 117 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 STAG3L2P0CL84 134 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 STAG3L3P0CL85 134 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 RD3LP0DJH9 198 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 GATA2P23769 480 aaPredicted RBP12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 TAGLN2P37802 199 aaKnown RBP12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 PPT1P50897 306 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 SLURP1P55000 103 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 TAS2R45P59539 299 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 TIGITQ495A1 244 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 LCN15Q6UWW0 184 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 SSX7Q7RTT5 188 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 S100A7AQ86SG5 101 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 OR51G1Q8NGK1 321 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 ELOVL1Q9BW60 279 aa12.93□□□□□ -0.34
SCAMP4-204ENST00000414057 NUPL2O15504 423 aaKnown RBP12.92□□□□□ -0.34
SCAMP4-204ENST00000414057 IFNA1P01562 189 aa12.92□□□□□ -0.34
SCAMP4-204ENST00000414057 PSG1P11464 419 aa12.92□□□□□ -0.34
SCAMP4-204ENST00000414057 ZP3P21754 424 aa12.92□□□□□ -0.34
SCAMP4-204ENST00000414057 FAM78BQ5VT40 261 aa12.92□□□□□ -0.34
SCAMP4-204ENST00000414057 C10orf113Q5VZT2 155 aa12.92□□□□□ -0.34
SCAMP4-204ENST00000414057 DNAH9Q9NYC9 4486 aa12.92□□□□□ -0.34
SCAMP4-204ENST00000414057 HYPMO75409 117 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 CXorf1O96002 111 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 PSMB3P49720 205 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 Q8WTZ3 238 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 TMEM37Q8WXS4 190 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 SEPSECSQ9HD40 501 aaKnown RBP12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 TECRQ9NZ01 308 aaKnown RBP12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 U3KQK5 164 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 OR2C1O95371 312 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 CTSGP08311 255 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 S100A7P31151 101 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 PEA15Q15121 130 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 GUK1Q16774 197 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 KHDC3LQ587J8 217 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 PQLC2Q6ZP29 291 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 MANBALQ9NQG1 85 aa12.91□□□□□ -0.34
SCAMP4-204ENST00000414057 OR2T8A6NH00 312 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms