RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 MGST2Q99735 147 aa14.07□□□□□ -0.16
PHRF1-202ENST00000413872 SCRT1Q9BWW7 348 aa14.07□□□□□ -0.16
PHRF1-202ENST00000413872 VCX2Q9H322 139 aa14.07□□□□□ -0.16
PHRF1-202ENST00000413872 SOD3P08294 240 aa14.06□□□□□ -0.16
PHRF1-202ENST00000413872 TDGF1P13385 188 aa14.06□□□□□ -0.16
PHRF1-202ENST00000413872 CD33P20138 364 aa14.06□□□□□ -0.16
PHRF1-202ENST00000413872 RPL15P61313 204 aaKnown RBP14.06□□□□□ -0.16
PHRF1-202ENST00000413872 SRSF1Q07955 248 aaKnown RBP eCLIP14.06□□□□□ -0.167e-7■■■□□ 15
PHRF1-202ENST00000413872 OR13C6PQ8NH95 151 aa14.06□□□□□ -0.16
PHRF1-202ENST00000413872 GAGE10A6NGK3 116 aa14.06□□□□□ -0.16
PHRF1-202ENST00000413872 OCC1Q8TAD7 63 aa14.06□□□□□ -0.16
PHRF1-202ENST00000413872 CYSLTR1Q9Y271 337 aa14.06□□□□□ -0.16
PHRF1-202ENST00000413872 ANAPC1Q9H1A4 1944 aa14.06□□□□□ -0.16
PHRF1-202ENST00000413872 TRAV5A0A0B4J249 113 aa14.06□□□□□ -0.16
PHRF1-202ENST00000413872 LCNL1Q6ZST4 164 aa14.06□□□□□ -0.16
PHRF1-202ENST00000413872 ZNF407Q9C0G0 2248 aa14.06□□□□□ -0.16
PHRF1-202ENST00000413872 TEX36Q5VZQ5 186 aa14.06□□□□□ -0.16
PHRF1-202ENST00000413872 FRMPD3Q5JV73 1810 aa14.05□□□□□ -0.16
PHRF1-202ENST00000413872 DNAL4O96015 105 aa14.05□□□□□ -0.16
PHRF1-202ENST00000413872 RNASE2P10153 161 aaKnown RBP14.05□□□□□ -0.16
PHRF1-202ENST00000413872 KLF17Q5JT82 389 aaPredicted RBP14.05□□□□□ -0.16
PHRF1-202ENST00000413872 TTC9CQ8N5M4 171 aa14.05□□□□□ -0.16
PHRF1-202ENST00000413872 PARD6GQ9BYG4 376 aaPredicted RBP14.05□□□□□ -0.16
PHRF1-202ENST00000413872 DAZ1Q9NQZ3 744 aaKnown RBP14.05□□□□□ -0.16
PHRF1-202ENST00000413872 LOC102724200A0A096LPH7 203 aaPredicted RBP14.05□□□□□ -0.16
PHRF1-202ENST00000413872 TRAV8-6A0A0B4J262 113 aa14.05□□□□□ -0.16
PHRF1-202ENST00000413872 RFNGQ9Y644 331 aa14.05□□□□□ -0.16
PHRF1-202ENST00000413872 C3orf56Q8N813 242 aa14.05□□□□□ -0.16
PHRF1-202ENST00000413872 FAM110DQ8TAY7 271 aaPredicted RBP14.05□□□□□ -0.16
PHRF1-202ENST00000413872 ERVK11-1P61568 191 aa14.05□□□□□ -0.16
PHRF1-202ENST00000413872 PRADC1Q9BSG0 188 aa14.05□□□□□ -0.16
PHRF1-202ENST00000413872 USF3Q68DE3 2245 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 NUP210Q8TEM1 1887 aaPredicted RBP14.04□□□□□ -0.16
PHRF1-202ENST00000413872 COTL1Q14019 142 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 IGFL2Q6UWQ7 119 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 Q6ZR03 302 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 SLX1AQ9BQ83 275 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 PLXNA2O75051 1894 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 LINC00311Q8N616 119 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 TCRAP04437 139 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 ZNF688P0C7X2 276 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 CNTFRP26992 372 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 Q96MF0 132 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 FANCMQ8IYD8 2048 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 A0A1B0GW64 132 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 ZNF415Q09FC8 603 aa14.04□□□□□ -0.16
PHRF1-202ENST00000413872 K7ERU9 68 aa14.03□□□□□ -0.16
PHRF1-202ENST00000413872 VSIRQ9H7M9 311 aa14.03□□□□□ -0.16
PHRF1-202ENST00000413872 GNB1LQ9BYB4 327 aa14.03□□□□□ -0.16
PHRF1-202ENST00000413872 ZNF329Q86UD4 541 aa14.03□□□□□ -0.16
PHRF1-202ENST00000413872 RHPN1-AS1Q9BWJ2 59 aa14.03□□□□□ -0.16
PHRF1-202ENST00000413872 TOMM7Q9P0U1 55 aa14.03□□□□□ -0.16
PHRF1-202ENST00000413872 NPIPB5A8MRT5 1133 aa14.03□□□□□ -0.16
PHRF1-202ENST00000413872 TMEM170AQ8WVE7 144 aa14.03□□□□□ -0.16
PHRF1-202ENST00000413872 C15orf62A8K5M9 175 aa14.02□□□□□ -0.16
PHRF1-202ENST00000413872 MALP21145 153 aa14.02□□□□□ -0.16
PHRF1-202ENST00000413872 LINC01559Q495D7 138 aa14.02□□□□□ -0.16
PHRF1-202ENST00000413872 KIR3DL3Q8N743 410 aa14.02□□□□□ -0.16
PHRF1-202ENST00000413872 AGMATQ9BSE5 352 aa14.02□□□□□ -0.16
PHRF1-202ENST00000413872 HBDP02042 147 aa14.02□□□□□ -0.16
PHRF1-202ENST00000413872 CRPP02741 224 aa14.02□□□□□ -0.16
PHRF1-202ENST00000413872 PHF3Q92576 2039 aaKnown RBP14.02□□□□□ -0.17
PHRF1-202ENST00000413872 TMEM242Q9NWH2 141 aa14.02□□□□□ -0.17
PHRF1-202ENST00000413872 SRSF4Q08170 494 aaKnown RBP14.02□□□□□ -0.17
PHRF1-202ENST00000413872 RCHY1Q96PM5 261 aa14.02□□□□□ -0.17
PHRF1-202ENST00000413872 LY96Q9Y6Y9 160 aa14.02□□□□□ -0.17
PHRF1-202ENST00000413872 IGKV2-40A0A087WW87 121 aaPredicted RBP14.01□□□□□ -0.17
PHRF1-202ENST00000413872 IGKV2D-40P01614 121 aaPredicted RBP14.01□□□□□ -0.17
PHRF1-202ENST00000413872 IGKV1-16P04430 117 aa14.01□□□□□ -0.17
PHRF1-202ENST00000413872 RPP25LQ8N5L8 163 aaKnown RBP14.01□□□□□ -0.17
PHRF1-202ENST00000413872 LOXP28300 417 aaPredicted RBP14.01□□□□□ -0.17
PHRF1-202ENST00000413872 DDTP30046 118 aa14.01□□□□□ -0.17
PHRF1-202ENST00000413872 PDE6HQ13956 83 aa14.01□□□□□ -0.17
PHRF1-202ENST00000413872 SEPSECSQ9HD40 501 aaKnown RBP14.01□□□□□ -0.17
PHRF1-202ENST00000413872 FER1L5A0AVI2 2057 aa14.01□□□□□ -0.17
PHRF1-202ENST00000413872 ATOH7Q8N100 152 aa14.01□□□□□ -0.17
PHRF1-202ENST00000413872 NDUFB8O95169 186 aa14.01□□□□□ -0.17
PHRF1-202ENST00000413872 INSP01308 110 aa14.01□□□□□ -0.17
PHRF1-202ENST00000413872 NTF4P34130 210 aa14.01□□□□□ -0.17
PHRF1-202ENST00000413872 CR1LQ2VPA4 569 aa14.01□□□□□ -0.17
PHRF1-202ENST00000413872 CYTL1Q9NRR1 136 aa14.01□□□□□ -0.17
PHRF1-202ENST00000413872 SRRM4A7MD48 611 aaKnown RBP14□□□□□ -0.17
PHRF1-202ENST00000413872 ZNF581Q9P0T4 197 aa14□□□□□ -0.17
PHRF1-202ENST00000413872 GHRHP01286 108 aa14□□□□□ -0.17
PHRF1-202ENST00000413872 ZNF833PQ6ZTB9 187 aa14□□□□□ -0.17
PHRF1-202ENST00000413872 EXOC3-AS1Q8N2X6 119 aa14□□□□□ -0.17
PHRF1-202ENST00000413872 SPATA31B1PQ5VZV4 182 aa14□□□□□ -0.17
PHRF1-202ENST00000413872 NUDT10Q8NFP7 164 aa14□□□□□ -0.17
PHRF1-202ENST00000413872 NUDT11Q96G61 164 aa14□□□□□ -0.17
PHRF1-202ENST00000413872 KAAG1Q9UBP8 84 aa14□□□□□ -0.17
PHRF1-202ENST00000413872 ABCA1O95477 2261 aa14□□□□□ -0.17
PHRF1-202ENST00000413872 BEX4Q9NWD9 120 aaPredicted RBP14□□□□□ -0.17
PHRF1-202ENST00000413872 NOTCH4Q99466 2003 aa14□□□□□ -0.17
PHRF1-202ENST00000413872 PRDM13Q9H4Q3 707 aa13.99□□□□□ -0.17
PHRF1-202ENST00000413872 A0A1W2PPI3 338 aa13.99□□□□□ -0.17
PHRF1-202ENST00000413872 RUSC1-AS1Q66K80 236 aa13.99□□□□□ -0.17
PHRF1-202ENST00000413872 CHCHD5Q9BSY4 110 aa13.99□□□□□ -0.17
PHRF1-202ENST00000413872 LCN12Q6JVE5 192 aa13.99□□□□□ -0.17
PHRF1-202ENST00000413872 RASL11AQ6T310 242 aa13.99□□□□□ -0.17
PHRF1-202ENST00000413872 DMRT1Q9Y5R6 373 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms