RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 RAB9AP51151 201 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 LYZP61626 148 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 FOXE3Q13461 319 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 USF2Q15853 346 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-207ENST00000413509 FAM209BQ5JX69 171 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 FAM90A2PQ658T7 463 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 ZNF600Q6ZNG1 722 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 LINC00305Q7Z4B0 112 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 CCDC28AQ8IWP9 274 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 STXBP6Q8NFX7 210 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 OR5AU1Q8NGC0 362 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 OR1B1Q8NGR6 318 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 RXFP4Q8TDU9 374 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 WIPF2Q8TF74 440 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-207ENST00000413509 FXYD5Q96DB9 178 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 NARS2Q96I59 477 aaKnown RBP6.38□□□□□ -1.39
HDAC9-207ENST00000413509 MS4A10Q96PG2 267 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 UHRF2Q96PU4 802 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 SHANK2-AS3Q9BTD1 123 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 SLC25A39Q9BZJ4 359 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-207ENST00000413509 KLK15Q9H2R5 256 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 SERTAD4Q9NUC0 356 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 DOK5Q9P104 306 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 CDC42EP3Q9UKI2 254 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 YTHDF2Q9Y5A9 579 aaKnown RBP6.38□□□□□ -1.39
HDAC9-207ENST00000413509 FN1P02751 2386 aaKnown RBP6.38□□□□□ -1.39
HDAC9-207ENST00000413509 CUBNO60494 3623 aa6.38□□□□□ -1.39
HDAC9-207ENST00000413509 SETD2Q9BYW2 2564 aaPredicted RBP6.37□□□□□ -1.39
HDAC9-207ENST00000413509 TRAV5A0A0B4J249 113 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 A0A0G2JLM5 398 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 A0A1W2PRE2 83 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 CLPSL1A2RUU4 121 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 F8W036 122 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 MRPS12O15235 138 aaKnown RBP6.37□□□□□ -1.39
HDAC9-207ENST00000413509 NUPL2O15504 423 aaKnown RBP6.37□□□□□ -1.39
HDAC9-207ENST00000413509 PAGE4O60829 102 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 IL4P05112 153 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 CLEC3BP05452 202 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 RNASE1P07998 156 aaKnown RBP6.37□□□□□ -1.39
HDAC9-207ENST00000413509 ELANEP08246 267 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 GPR183P32249 361 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 RIPPLY3P57055 190 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 TPPP2P59282 170 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 GUCA2BQ16661 112 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 CYB561D1Q8N8Q1 229 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 Q8WTZ3 238 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 TMEM190Q8WZ59 177 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 C11orf52Q96A22 123 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 SMR3AQ99954 134 aa6.37□□□□□ -1.39
HDAC9-207ENST00000413509 NIPBLQ6KC79 2804 aaeCLIP6.37□□□□□ -1.39
HDAC9-207ENST00000413509 TEP1Q99973 2627 aaKnown RBP6.37□□□□□ -1.39
HDAC9-207ENST00000413509 F8P00451 2351 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 C2CD3Q4AC94 2353 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 C11orf94C9JXX5 98 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 PDE6DO43924 150 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 OR7C2O60412 319 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 PF4V1P10720 104 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 SRD5A1P18405 259 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 NPPCP23582 126 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 MYCNOSP40205 109 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 HILS1P60008 231 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 UBE2L3P68036 154 aaKnown RBP6.36□□□□□ -1.39
HDAC9-207ENST00000413509 RELQ04864 619 aaPredicted RBP6.36□□□□□ -1.39
HDAC9-207ENST00000413509 SOHLH1Q5JUK2 328 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 TOMM20LQ6UXN7 152 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 CLEC19AQ6UXS0 136 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 Q6ZSV7 163 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 S100A7AQ86SG5 101 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 SVBPQ8N300 66 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 PAXXQ9BUH6 204 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 OR51M1Q9H341 326 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 C16orf95Q9H693 158 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 PUS1Q9Y606 427 aaKnown RBP eCLIP6.36□□□□□ -1.39
HDAC9-207ENST00000413509 U3KQE9 123 aa6.36□□□□□ -1.39
HDAC9-207ENST00000413509 FAM181BA6NEQ2 426 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 ZNF98A6NK75 572 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 GGTLC3B5MD39 225 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 F6UZH7 168 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 BMPR1BO00238 502 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 NDUFA4O00483 81 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 TRBV12-3P01733 135 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 APOC3P02656 99 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 IGLC2P0DOY2 106 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 PYYP10082 97 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 ATP5G3P48201 142 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 SLC35B1P78383 322 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 FAM74A3Q4VXF1 159 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 TEX38Q6PEX7 206 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 C10orf99Q6UWK7 81 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 ZNF329Q86UD4 541 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 OR4X2Q8NGF9 303 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 DUX5Q96PT3 197 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 TCEAL7Q9BRU2 100 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 NKX6-2Q9C056 277 aaPredicted RBP6.35□□□□□ -1.39
HDAC9-207ENST00000413509 RNF24Q9Y225 148 aa6.35□□□□□ -1.39
HDAC9-207ENST00000413509 PPP5D1E7EU14 171 aa6.34□□□□□ -1.39
HDAC9-207ENST00000413509 NDUFA7O95182 113 aa6.34□□□□□ -1.39
HDAC9-207ENST00000413509 OR10J4P0C629 311 aa6.34□□□□□ -1.39
HDAC9-207ENST00000413509 HIST1H1EP10412 219 aaKnown RBP6.34□□□□□ -1.39
HDAC9-207ENST00000413509 CD99P14209 185 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms