RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 DOCK11Q5JSL3 2073 aa7.03□□□□□ -1.28
PBRM1-209ENST00000412587 PRSS29PA6NIE9 313 aa7.03□□□□□ -1.28
PBRM1-209ENST00000412587 ZNF726P1Q15940 193 aa7.03□□□□□ -1.28
PBRM1-209ENST00000412587 HCP5Q6MZN7 132 aa7.03□□□□□ -1.28
PBRM1-209ENST00000412587 ETV2O00321 342 aaPredicted RBP7.02□□□□□ -1.29
PBRM1-209ENST00000412587 ASIPP42127 132 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 QRFPP83859 136 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 FAM201AQ5SY85 155 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 SPAG8Q99932 426 aaPredicted RBP7.02□□□□□ -1.29
PBRM1-209ENST00000412587 ANAPC10Q9UM13 185 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 FREM3P0C091 2139 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 C17orf100A8MU93 164 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 RPL32P62910 135 aaKnown RBP7.02□□□□□ -1.29
PBRM1-209ENST00000412587 PCSK4Q6UW60 755 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 FAM110AQ9BQ89 295 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 MCRIP2Q9BUT9 160 aaKnown RBP7.02□□□□□ -1.29
PBRM1-209ENST00000412587 PLXNA3P51805 1871 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 TANC1Q9C0D5 1861 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 WDR81Q562E7 1941 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 IGHV1-24A0A0C4DH33 117 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 IQCF6A8MYZ5 107 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 Q0VFX4 171 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 FAM216BQ8N7L0 139 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 DYNLRB2Q8TF09 96 aa7.02□□□□□ -1.29
PBRM1-209ENST00000412587 IGKV3D-15A0A087WSY6 115 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.01□□□□□ -1.29
PBRM1-209ENST00000412587 LGALS3P17931 250 aaKnown RBP7.01□□□□□ -1.29
PBRM1-209ENST00000412587 CTRLP40313 264 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 LOXL3P58215 753 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 ATP5G2Q06055 141 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 DRAM1Q8N682 238 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 NUP35Q8NFH5 326 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 FCGR2BP31994 310 aaPredicted RBP7.01□□□□□ -1.29
PBRM1-209ENST00000412587 ADIPOQQ15848 244 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 GGNQ86UU5 652 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 C12orf77C9JDV5 145 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 WFDC2Q14508 124 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 C2orf83Q53S99 150 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 COQ2Q96H96 371 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 SCRT2Q9NQ03 307 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 F5H697 171 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 ORM1P02763 201 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 HOXA4Q00056 320 aaPredicted RBP7.01□□□□□ -1.29
PBRM1-209ENST00000412587 PRSS57Q6UWY2 283 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 FOXI2Q6ZQN5 318 aa7.01□□□□□ -1.29
PBRM1-209ENST00000412587 EBLN2Q6P2I7 272 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 TMEM14EPQ6UXP3 125 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 MIR17HGQ75NE6 70 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 WFDC3Q8IUB2 231 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 HIGD1AQ9Y241 93 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 TRACP01848 142 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 FOXF2Q12947 444 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 CLPSP04118 112 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 ZNF415Q09FC8 603 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 FOXI1Q12951 378 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 ZNF56Q15929 161 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 LY6EQ16553 131 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 TAL2Q16559 108 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 AMTNQ6UX39 209 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 TCF19Q9Y242 345 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 PCNX2A6NKB5 2137 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 ATRXP46100 2492 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 AREGP15514 252 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 FOXG1P55316 489 aaPredicted RBP7□□□□□ -1.29
PBRM1-209ENST00000412587 MDS2Q8NDY4 140 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 FMC1Q96HJ9 113 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 SCRT1Q9BWW7 348 aa7□□□□□ -1.29
PBRM1-209ENST00000412587 IGHV3OR16-10A0A075B7F0 116 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 MOSP00540 346 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 GTSCR1Q86UQ5 136 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 CACNG8Q8WXS5 425 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 FAM168AQ92567 244 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 V9GYV3 84 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 USF3Q68DE3 2245 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 ZNF407Q9C0G0 2248 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 FABP5P3A8MUU1 101 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 TM4SF5O14894 197 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 EFNB3Q15768 340 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 SHISA2Q6UWI4 295 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 FAM90A1Q86YD7 464 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 ATP6V0E2Q8NHE4 81 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 PTH2Q96A98 100 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 LEPP41159 167 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 OR13A1Q8NGR1 328 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 ZC2HC1AQ96GY0 325 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 DPM3Q9P2X0 92 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 IGKV1D-13A0A0B4J2D9 117 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 NDUFA3O95167 84 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 IGHV4-39P01824 125 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 IGKV1-13P0DP09 117 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 LGALS9BQ3B8N2 356 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 LGALS9CQ6DKI2 356 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 CEND1Q8N111 149 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 FGFBP3Q8TAT2 258 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 SPATA25Q9BR10 227 aa6.99□□□□□ -1.29
PBRM1-209ENST00000412587 IGHV1-18A0A0C4DH31 117 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 C9JAW5 83 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 PRSS2P07478 247 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 PPIFP30405 207 aaKnown RBP6.98□□□□□ -1.29
PBRM1-209ENST00000412587 KLF5Q13887 457 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms