RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 HERV-K104P61576 105 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 ZNF816Q0VGE8 651 aaPredicted RBP4.19□□□□□ -1.74
HERC4-205ENST00000412272 PLPP4Q5VZY2 271 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 FAM57AQ8TBR7 257 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 DSCR8Q96T75 97 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 C16orf95Q9H693 158 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 NPIPB6E9PJ23 425 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 FAM231DQ6ZW35 169 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 PSENENQ9NZ42 101 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 ARID1BQ8NFD5 2236 aaPredicted RBP4.18□□□□□ -1.74
HERC4-205ENST00000412272 ARHGEF17Q96PE2 2063 aaPredicted RBP4.18□□□□□ -1.74
HERC4-205ENST00000412272 NPIPB11E5RHQ5 1161 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 LMO7DNF2Z398 122 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 HLA-DRB4P13762 266 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 ZNF823P16415 610 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 FKBP2P26885 142 aaKnown RBP4.18□□□□□ -1.74
HERC4-205ENST00000412272 TMEM52BQ4KMG9 183 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 CEMP1Q6PRD7 247 aaPredicted RBP4.18□□□□□ -1.74
HERC4-205ENST00000412272 LINC00311Q8N616 119 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 CHAC1Q9BUX1 264 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 HLA-DRB4X5D2U9 266 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 TRBV6-6A0A0A6YYG2 114 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 A0A1W2PQD3 144 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 C2CD4DB7Z1M9 353 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 FOXL2NBQ6ZUU3 175 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 C6orf201Q7Z4U5 140 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 BEX4Q9NWD9 120 aaPredicted RBP4.18□□□□□ -1.74
HERC4-205ENST00000412272 PILRAQ9UKJ1 303 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 SPTBN5Q9NRC6 3674 aaKnown RBP4.18□□□□□ -1.74
HERC4-205ENST00000412272 TRAV8-1A0A0A6YYK1 113 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 C15orf62A8K5M9 175 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 EPM2AB3EWF7 344 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 EFNA4P52798 201 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 Q6ZPA2 131 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 PRIMA1Q86XR5 153 aa4.18□□□□□ -1.74
HERC4-205ENST00000412272 PDCD6O75340 191 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 CLDN14O95500 239 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 P0C879 139 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 Q6P435 159 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 NPCDR1Q9BY65 106 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 FSCN3Q9NQT6 498 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 MYO9BQ13459 2157 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 MUC3AQ02505 3323 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 TRAV8-2A0A0B4J237 113 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 TEX50A0A1B0GTY4 177 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 A0A1B0GXF2 115 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 C5orf49A4QMS7 147 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 C5orf63A6NC05 138 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 C17orf51A8MQB3 221 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 LTAP01374 205 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 LGALS1P09382 135 aaKnown RBP4.17□□□□□ -1.74
HERC4-205ENST00000412272 COX7CP15954 63 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 MOB3BQ86TA1 216 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 MYOZ3Q8TDC0 251 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 TMEM158Q8WZ71 300 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 ZNF747Q9BV97 191 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 GON4LQ3T8J9 2241 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 SCO2A0A1W2PP80 73 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 CLPSP04118 112 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 GLI4P10075 376 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 TNFRSF4P43489 277 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 PLGLB1Q02325 96 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 CST6Q15828 149 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 ZNF818PQ6ZRF7 136 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 WFDC3Q8IUB2 231 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 FLVCR1-AS1Q8TAF5 88 aa4.17□□□□□ -1.74
HERC4-205ENST00000412272 ZFHX3Q15911 3703 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 A0A0G2JRQ6 117 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 A0A0U1RQV1 116 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 MYCNOSP40205 109 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 NXPH1P58417 271 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 Q6ZR03 302 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 RNF44Q7L0R7 432 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 HDHD3Q9BSH5 251 aaPredicted RBP4.16□□□□□ -1.74
HERC4-205ENST00000412272 ZNF331Q9NQX6 463 aaPredicted RBP4.16□□□□□ -1.74
HERC4-205ENST00000412272 ALKBH4Q9NXW9 302 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 DLL1O00548 723 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 HLA-DMBP28068 263 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 UBE2D3P61077 147 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 UBE2D2P62837 147 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 TRGV11A0A075B6L2 103 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 C15orf61A6NNL5 157 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 A8MWV9 139 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 SPINT2O43291 252 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 PRSS12P56730 875 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 CLLU1OSQ5K130 101 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 LYZL4Q96KX0 146 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 IGF2BP2-AS1Q96M15 143 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 HEYLQ9NQ87 328 aaPredicted RBP4.16□□□□□ -1.74
HERC4-205ENST00000412272 TMSB15BA0A087X1C1 80 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 UBE2L5PA0A1B0GUS4 154 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 HAX1O00165 279 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 CXCL13O43927 109 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 TCL1BO95988 128 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 CD164Q04900 197 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 DAZAP2Q15038 168 aaPredicted RBP4.16□□□□□ -1.74
HERC4-205ENST00000412272 PQLC2Q6ZP29 291 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 AAED1Q7RTV5 226 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 SLC25A45Q8N413 288 aa4.16□□□□□ -1.74
HERC4-205ENST00000412272 SHANK2-AS3Q9BTD1 123 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms