RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 USE1Q9NZ43 259 aa-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 PKIGQ9Y2B9 76 aa-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 PLXNA4Q9HCM2 1894 aa-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 WRNQ14191 1432 aaPredicted RBP eCLIP-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 CELSR2Q9HCU4 2923 aa-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 TRAV10A0A0B4J240 114 aa-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 PIRO00625 290 aa-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 RBP1P09455 135 aa-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 MAGEA2P43356 314 aa-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 SPCS3P61009 180 aa-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 DYNLT1P63172 113 aa-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 ACOT6Q3I5F7 207 aaPredicted RBP-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 PLAC4Q8WY50 150 aa-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 WFDC10AQ9H1F0 79 aa-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 MRPL27Q9P0M9 148 aaKnown RBP-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 TENM2Q9NT68 2774 aa-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 SIP14410 1827 aa-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 FAT1Q14517 4588 aa-0.62□□□□□ -2.51
RNU4-55P-201ENST00000410731 PTPRQQ9UMZ3 2332 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 KMT2CQ8NEZ4 4911 aaKnown RBP-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 MAP1BP46821 2468 aaKnown RBP-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 TRAV26-2A0A0B4J265 109 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 OR4C46A6NHA9 309 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 C10orf142B7Z368 130 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 CD2P06729 351 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 FREM3P0C091 2139 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 COX7CP15954 63 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 DEFA1P59665 94 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 C4orf22Q6V702 233 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 SLC30A7Q8NEW0 376 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 OR52L1Q8NGH7 329 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 CANT1Q8WVQ1 401 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 C2orf50Q96LR7 162 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 PRADC1Q9BSG0 188 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 PCTPQ9UKL6 214 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 RNF11Q9Y3C5 154 aa-0.63□□□□□ -2.51
RNU4-55P-201ENST00000410731 BCL9O00512 1426 aa-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 HECW1Q76N89 1606 aa-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 LOC285556D6RIA3 1793 aa-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 E7EUB6 86 aa-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 DSCR4P56555 118 aaPredicted RBP-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 OR2F1Q13607 317 aa-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 KRT222Q8N1A0 295 aa-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 C12orf45Q8N5I9 185 aaPredicted RBP-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 LINC00467Q9BRT7 94 aa-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 CCDC90BQ9GZT6 254 aa-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 CSMD3Q7Z407 3707 aa-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 CREBBPQ92793 2442 aa-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 FANCMQ8IYD8 2048 aa-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.64□□□□□ -2.51
RNU4-55P-201ENST00000410731 PDZD2O15018 2839 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 MYH10P35580 1976 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 BSNQ9UPA5 3926 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 ZNF727A8MUV8 499 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 FAM25EA8MYX2 175 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 C1orf196B1AJZ1 125 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 JMJD7-PLA2G4BH0Y9G9 81 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 TGOLN2O43493 480 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 TIMM17BO60830 172 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 AP3S2P59780 193 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 ROMO1P60602 79 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 RHOBP62745 196 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 PRR15Q8IV56 129 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 PXT1Q8NFP0 134 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 ZNF431Q8TF32 576 aaPredicted RBP-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 PTH2Q96A98 100 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 RIMBP3CA6NJZ7 1639 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 RIMBP3BA6NNM3 1639 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 RIMBP3Q9UFD9 1639 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 ZGRF1Q86YA3 2104 aa-0.65□□□□□ -2.51
RNU4-55P-201ENST00000410731 LRP1BQ9NZR2 4599 aa-0.66□□□□□ -2.51
RNU4-55P-201ENST00000410731 ROBO3Q96MS0 1386 aa-0.66□□□□□ -2.51
RNU4-55P-201ENST00000410731 MYO7AQ13402 2215 aa-0.66□□□□□ -2.51
RNU4-55P-201ENST00000410731 KDM6BO15054 1643 aa-0.66□□□□□ -2.51
RNU4-55P-201ENST00000410731 TNNC2P02585 160 aa-0.66□□□□□ -2.52
RNU4-55P-201ENST00000410731 TMEM133Q9H2Q1 129 aa-0.66□□□□□ -2.52
RNU4-55P-201ENST00000410731 RNF122Q9H9V4 155 aa-0.66□□□□□ -2.52
RNU4-55P-201ENST00000410731 PLXND1Q9Y4D7 1925 aa-0.66□□□□□ -2.52
RNU4-55P-201ENST00000410731 ACANP16112 2415 aa-0.66□□□□□ -2.52
RNU4-55P-201ENST00000410731 STAB2Q8WWQ8 2551 aa-0.66□□□□□ -2.52
RNU4-55P-201ENST00000410731 AKAP6Q13023 2319 aa-0.66□□□□□ -2.52
RNU4-55P-201ENST00000410731 HECW2Q9P2P5 1572 aa-0.66□□□□□ -2.52
RNU4-55P-201ENST00000410731 DOPEY2Q9Y3R5 2298 aa-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 SETXQ7Z333 2677 aaKnown RBP-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 TRAV23DV6A0A075B6W5 121 aa-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 ERC2-IT1O76042 136 aa-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 PPYP01298 95 aa-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 CALB1P05937 261 aa-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 HIST1H1EP10412 219 aaKnown RBP-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 RNASE4P34096 147 aaKnown RBP-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 LYG2Q86SG7 212 aa-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 OR5D14Q8NGL3 314 aa-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 Q8TAT8 98 aa-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 DCUN1D1Q96GG9 259 aa-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 FBXO5Q9UKT4 447 aa-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 LY96Q9Y6Y9 160 aa-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 JMJD1CQ15652 2540 aa-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 FAT2Q9NYQ8 4349 aa-0.67□□□□□ -2.52
RNU4-55P-201ENST00000410731 COL6A3P12111 3177 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms