RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 SMG1Q96Q15 3661 aaKnown RBP5.89□□□□□ -1.47
CXCR4-202ENST00000409817 IGHV1-69DA0A0B4J2H0 117 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 IGHV4-61A0A0C4DH41 118 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 A0A1W2PPQ1 181 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 ISLRO14498 428 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 GNG7O60262 68 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 GCGP01275 180 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 IGHV1-69P01742 117 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 TRGC2P03986 189 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 PYYP10082 97 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 HIST1H1EP10412 219 aaKnown RBP5.89□□□□□ -1.47
CXCR4-202ENST00000409817 GP9P14770 177 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 SLC25A16P16260 332 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 LYZP61626 148 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 FABP9Q0Z7S8 132 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 RUSC1-AS1Q66K80 236 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 C19orf35Q6ZS72 473 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 ZNF329Q86UD4 541 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 OR5T1Q8NG75 326 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 FAM110DQ8TAY7 271 aaPredicted RBP5.89□□□□□ -1.47
CXCR4-202ENST00000409817 FAM103A1Q9BTL3 118 aaKnown RBP5.89□□□□□ -1.47
CXCR4-202ENST00000409817 SLC25A39Q9BZJ4 359 aaPredicted RBP5.89□□□□□ -1.47
CXCR4-202ENST00000409817 MEGF9Q9H1U4 602 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 C21orf62Q9NYP8 219 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 IL36BQ9NZH7 164 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 ITPR1Q14643 2758 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 RELNP78509 3460 aa5.89□□□□□ -1.47
CXCR4-202ENST00000409817 CACNA1BQ00975 2339 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 IGHV3-21A0A0B4J1V1 117 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 PEX7O00628 323 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 HIST1H2BKO60814 126 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 HIST1H2BJP06899 126 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 COX6B1P14854 86 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 HOXA5P20719 270 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 HIST1H2BOP23527 126 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 HIST1H2BBP33778 126 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 AKR1D1P51857 326 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 HIST1H2BDP58876 126 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 HIST1H2BCP62807 126 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 NDPQ00604 133 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 HIST2H2BEQ16778 126 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.88□□□□□ -1.47
CXCR4-202ENST00000409817 BPIFA4PQ86YQ2 179 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 LINC00518Q8N0U6 118 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 LYPD1Q8N2G4 141 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 ZNF843Q8N446 348 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 C5orf17Q8NAS9 161 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 NECAP1Q8NC96 275 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 HIST1H2BHQ93079 126 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 RNF125Q96EQ8 232 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 IGF2BP2-AS1Q96M15 143 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 ATP6V0BQ99437 205 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 HIST1H2BNQ99877 126 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 HIST1H2BMQ99879 126 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 SHANK2-AS3Q9BTD1 123 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 CHRDL1Q9BU40 450 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 EPDR1Q9UM22 224 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 KLF12Q9Y4X4 402 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 KALRNO60229 2985 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 HRNRQ86YZ3 2850 aaPredicted RBP5.88□□□□□ -1.47
CXCR4-202ENST00000409817 WI2-2373I1.2A0A1W2PRP0 233 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 PGPEP1LA6NFU8 196 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 B4DSR2 109 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 H3BRN7 92 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 K7EN84 100 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 PHOX2AO14813 284 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 MSMBP08118 114 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 EGR2P11161 476 aaPredicted RBP5.88□□□□□ -1.47
CXCR4-202ENST00000409817 ERVFC1-1P60608 527 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 TMEM183BQ1AE95 376 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 COX19Q49B96 90 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 FAM231DQ6ZW35 169 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 ZNF491Q8N8L2 437 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 ATG101Q9BSB4 218 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 OTORQ9NRC9 128 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 MOB4Q9Y3A3 225 aa5.88□□□□□ -1.47
CXCR4-202ENST00000409817 SLC25A5P05141 298 aaKnown RBP5.87□□□□□ -1.47
CXCR4-202ENST00000409817 TRGC1P0CF51 173 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 SMIM6P0DI80 62 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 CDX1P47902 265 aaPredicted RBP5.87□□□□□ -1.47
CXCR4-202ENST00000409817 CRIP2P52943 208 aaPredicted RBP5.87□□□□□ -1.47
CXCR4-202ENST00000409817 RANP62826 216 aaKnown RBP5.87□□□□□ -1.47
CXCR4-202ENST00000409817 PDE6HQ13956 83 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 RPEL1Q2QD12 228 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 FBLN7Q53RD9 439 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 Q56UQ5 140 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 ACTL10Q5JWF8 245 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 FAM120AOSQ5T036 256 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 ZNF600Q6ZNG1 722 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 C5orf56Q8N8D9 126 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 RNF152Q8N8N0 203 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 OR4F17Q8NGA8 305 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 FRZBQ92765 325 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 FMC1Q96HJ9 113 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 AURKAIP1Q9NWT8 199 aaPredicted RBP5.87□□□□□ -1.47
CXCR4-202ENST00000409817 PITPNC1Q9UKF7 332 aa5.87□□□□□ -1.47
CXCR4-202ENST00000409817 IGHV4-30-2A0A087WSY4 118 aa5.86□□□□□ -1.47
CXCR4-202ENST00000409817 TRBV9A0A0B4J1U6 114 aa5.86□□□□□ -1.47
CXCR4-202ENST00000409817 A0A0U1RQK1 487 aa5.86□□□□□ -1.47
CXCR4-202ENST00000409817 ZNF320A2RRD8 509 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms