RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 RNF2Q99496 336 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 MGST2Q99735 147 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 LINC01548A6NM66 108 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 MGPP08493 103 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 SGMS2Q8NHU3 365 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 MANBALQ9NQG1 85 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 WDR83OSQ9Y284 106 aa9.1□□□□□ -0.95
SNX13-202ENST00000409604 GPX1P07203 203 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 HSPB9Q9BQS6 159 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 SLC17A3O00476 420 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 TEX38Q6PEX7 206 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 CIARTQ8N365 385 aaPredicted RBP9.09□□□□□ -0.95
SNX13-202ENST00000409604 CLRN3Q8NCR9 226 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 PARLQ9H300 379 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 TUBA4BQ9H853 241 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 TNRC6BQ9UPQ9 1833 aaKnown RBP9.09□□□□□ -0.95
SNX13-202ENST00000409604 ELOA3CA0A087WX78 387 aaPredicted RBP9.09□□□□□ -0.95
SNX13-202ENST00000409604 INAFM1C9JVW0 142 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 ID1P41134 155 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 RIPPLY3P57055 190 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 SSBP2P81877 361 aaPredicted RBP9.09□□□□□ -0.95
SNX13-202ENST00000409604 KIAA1644Q3SXP7 199 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 FAM74A4Q5TZK3 123 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 Q6ZSR3 168 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 CACNG8Q8WXS5 425 aa9.09□□□□□ -0.95
SNX13-202ENST00000409604 CLDN34H7C241 214 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 TGOLN2O43493 480 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 PAX9P55771 341 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 HAPLN4Q86UW8 402 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 IER3P46695 156 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 EXPH5Q8NEV8 1989 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 XKRY2A2RUG3 117 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 RGS13O14921 159 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 HLA-DRB1P01911 266 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 PAX1P15863 534 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 RNF212Q495C1 297 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 PSMG4Q5JS54 123 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 TMEM14EPQ6UXP3 125 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 LINC00479Q96M42 142 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 CHRDL1Q9BU40 450 aa9.08□□□□□ -0.96
SNX13-202ENST00000409604 HTN3P15516 51 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 DEFB121Q5J5C9 76 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 SPANXN1Q5VSR9 72 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 ZNF841Q6ZN19 808 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 PUSL1Q8N0Z8 303 aaKnown RBP9.07□□□□□ -0.96
SNX13-202ENST00000409604 JMJD8Q96S16 334 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 NAT8Q9UHE5 227 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 HIST1H1EP10412 219 aaKnown RBP9.07□□□□□ -0.96
SNX13-202ENST00000409604 FBLN7Q53RD9 439 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 COMMD1Q8N668 190 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 KLHDC1Q8N7A1 406 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 Q8TAT8 98 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 CYTL1Q9NRR1 136 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 ZNF257Q9Y2Q1 563 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 A0A1B0GWJ7 208 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 CENPWQ5EE01 88 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 ZNF343Q6P1L6 599 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 ZNF600Q6ZNG1 722 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 NEU1Q99519 415 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 OOSP1A8MZH6 123 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 CA1P00915 261 aaPredicted RBP9.07□□□□□ -0.96
SNX13-202ENST00000409604 PMCHP20382 165 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 TCTAP57738 103 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 PGLYRP4Q96LB8 373 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 DERL1Q9BUN8 251 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 SLC25A39Q9BZJ4 359 aaPredicted RBP9.07□□□□□ -0.96
SNX13-202ENST00000409604 ANAPC10Q9UM13 185 aa9.07□□□□□ -0.96
SNX13-202ENST00000409604 LDLRAD2Q5SZI1 272 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 Q9H3A6 140 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 NDUFA4L2Q9NRX3 87 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 TMEM14BQ9NUH8 114 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 DSCAML1Q8TD84 2053 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 RPLP1P05386 114 aaKnown RBP9.06□□□□□ -0.96
SNX13-202ENST00000409604 GATA3P23771 443 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 MAS1LP35410 378 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 SNRPD3P62318 126 aaKnown RBP9.06□□□□□ -0.96
SNX13-202ENST00000409604 C2orf83Q53S99 150 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 OR11H1Q8NG94 326 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 KLK15Q9H2R5 256 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 FNDC4Q9H6D8 234 aaPredicted RBP9.06□□□□□ -0.96
SNX13-202ENST00000409604 TRAPPC1Q9Y5R8 145 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 RELNP78509 3460 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 IGKV2-40A0A087WW87 121 aaPredicted RBP9.06□□□□□ -0.96
SNX13-202ENST00000409604 LOC389332A0A1B0GUA5 103 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 IGKV2D-40P01614 121 aaPredicted RBP9.06□□□□□ -0.96
SNX13-202ENST00000409604 TCF24Q7RTU0 167 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 DDB2Q92466 427 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 BAHCC1Q9P281 2608 aa9.06□□□□□ -0.96
SNX13-202ENST00000409604 HCFC1P51610 2035 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 FAM74A7A6NL05 159 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 RPL35AP18077 110 aaKnown RBP9.05□□□□□ -0.96
SNX13-202ENST00000409604 FAM74A3Q4VXF1 159 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 FAM210BQ96KR6 192 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 RNF24Q9Y225 148 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 M0R381 172 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 PDE6DO43924 150 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 FCN3O75636 299 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 SCGB1D1O95968 90 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 IGLV1-47P01700 117 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 IBA57Q5T440 356 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms