RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 LGALS1P09382 135 aaKnown RBP6.67□□□□□ -1.34
SH3D19-202ENST00000409252 UTF1Q5T230 341 aa6.67□□□□□ -1.34
SH3D19-202ENST00000409252 CTDSP1Q9GZU7 261 aa6.67□□□□□ -1.34
SH3D19-202ENST00000409252 MEGF9Q9H1U4 602 aa6.67□□□□□ -1.34
SH3D19-202ENST00000409252 DUSP14O95147 198 aaKnown RBP6.67□□□□□ -1.34
SH3D19-202ENST00000409252 ZNF688P0C7X2 276 aa6.67□□□□□ -1.34
SH3D19-202ENST00000409252 BSXQ3C1V8 233 aa6.67□□□□□ -1.34
SH3D19-202ENST00000409252 COL27A1Q8IZC6 1860 aaPredicted RBP6.67□□□□□ -1.34
SH3D19-202ENST00000409252 WFDC1Q9HC57 220 aa6.67□□□□□ -1.34
SH3D19-202ENST00000409252 CCL24O00175 119 aa6.67□□□□□ -1.34
SH3D19-202ENST00000409252 LCN12Q6JVE5 192 aa6.67□□□□□ -1.34
SH3D19-202ENST00000409252 NHLRC2Q8NBF2 726 aa6.67□□□□□ -1.34
SH3D19-202ENST00000409252 OR2D3Q8NGH3 330 aa6.67□□□□□ -1.34
SH3D19-202ENST00000409252 C5orf30Q96GV9 206 aa6.67□□□□□ -1.34
SH3D19-202ENST00000409252 IGLC7A0M8Q6 106 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 TMEM189A5PLL7 270 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 ZNF98A6NK75 572 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 OR11H12B2RN74 326 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 TCL1AP56279 114 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 TRAV5A0A0B4J249 113 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 SPANXN1Q5VSR9 72 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 FAM159AQ6UWV7 190 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 OR10G8Q8NGN5 311 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 ST6GALNAC6Q969X2 333 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 IGHG2P01859 326 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 MGPP08493 103 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 FAM74A3Q4VXF1 159 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 SMUG1Q53HV7 270 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 C1QL4Q86Z23 238 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 CYB561D1Q8N8Q1 229 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 HIST1H2BAQ96A08 127 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 OTORQ9NRC9 128 aa6.66□□□□□ -1.34
SH3D19-202ENST00000409252 TRIOO75962 3097 aa6.65□□□□□ -1.34
SH3D19-202ENST00000409252 NDUFA4O00483 81 aa6.65□□□□□ -1.34
SH3D19-202ENST00000409252 NDUFA3O95167 84 aa6.65□□□□□ -1.34
SH3D19-202ENST00000409252 SYT8Q8NBV8 401 aa6.65□□□□□ -1.34
SH3D19-202ENST00000409252 LINC01587Q99440 93 aa6.65□□□□□ -1.34
SH3D19-202ENST00000409252 COL6A3P12111 3177 aa6.65□□□□□ -1.34
SH3D19-202ENST00000409252 PMS2P5A8MQ11 134 aa6.65□□□□□ -1.34
SH3D19-202ENST00000409252 FNDC10F2Z333 226 aa6.65□□□□□ -1.34
SH3D19-202ENST00000409252 IGLV2-23P01705 113 aa6.65□□□□□ -1.34
SH3D19-202ENST00000409252 RPL35AP18077 110 aaKnown RBP6.65□□□□□ -1.34
SH3D19-202ENST00000409252 EMP1P54849 157 aa6.65□□□□□ -1.34
SH3D19-202ENST00000409252 YPEL3P61236 119 aaPredicted RBP6.65□□□□□ -1.34
SH3D19-202ENST00000409252 SRSF2Q01130 221 aaKnown RBP6.65□□□□□ -1.34
SH3D19-202ENST00000409252 TCTEX1D4Q5JR98 221 aa6.65□□□□□ -1.34
SH3D19-202ENST00000409252 SAPCD1Q5SSQ6 148 aa6.65□□□□□ -1.34
SH3D19-202ENST00000409252 TOMM20LQ6UXN7 152 aa6.65□□□□□ -1.34
SH3D19-202ENST00000409252 HOXD3P31249 432 aaPredicted RBP6.65□□□□□ -1.35
SH3D19-202ENST00000409252 PNRC1Q12796 327 aaPredicted RBP6.65□□□□□ -1.35
SH3D19-202ENST00000409252 BTN1A1Q13410 526 aa6.65□□□□□ -1.35
SH3D19-202ENST00000409252 ARFGEF3Q5TH69 2177 aa6.65□□□□□ -1.35
SH3D19-202ENST00000409252 TRAV34A0A0B4J273 112 aa6.65□□□□□ -1.35
SH3D19-202ENST00000409252 SRSF1Q07955 248 aaKnown RBP eCLIP6.65□□□□□ -1.35
SH3D19-202ENST00000409252 Q6ZPA2 131 aa6.65□□□□□ -1.35
SH3D19-202ENST00000409252 C9orf139Q6ZV77 190 aa6.65□□□□□ -1.35
SH3D19-202ENST00000409252 SAMD10Q9BYL1 202 aa6.65□□□□□ -1.35
SH3D19-202ENST00000409252 PEX7O00628 323 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 LEPP41159 167 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 SPATA31B1PQ5VZV4 182 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 NAV3Q8IVL0 2385 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 AVPP01185 164 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 RNASE4P34096 147 aaKnown RBP6.64□□□□□ -1.35
SH3D19-202ENST00000409252 CAMPP49913 170 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 ACTL10Q5JWF8 245 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 WFDC12Q8WWY7 111 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 G3V3Q6 166 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 BAGE3Q86Y29 109 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 XIRP2A4UGR9 3374 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 SNURFLB1AK76 121 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 IGLV2-14P01704 120 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 PRB4P10163 310 aaPredicted RBP6.64□□□□□ -1.35
SH3D19-202ENST00000409252 SLURP1P55000 103 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 GNG5P63218 68 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 CITED2Q99967 270 aaPredicted RBP6.64□□□□□ -1.35
SH3D19-202ENST00000409252 VSIRQ9H7M9 311 aa6.64□□□□□ -1.35
SH3D19-202ENST00000409252 CBY3A6NI87 242 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 HSBP1L1C9JCN9 74 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 MDKP21741 143 aaPredicted RBP6.63□□□□□ -1.35
SH3D19-202ENST00000409252 FABP9Q0Z7S8 132 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 RIGQ13278 110 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 RARRES2Q99969 163 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 GOLT1BQ9Y3E0 138 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 HILS1P60008 231 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 CFHR4Q92496 578 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 POLR3KQ9Y2Y1 108 aaPredicted RBP6.63□□□□□ -1.35
SH3D19-202ENST00000409252 PHLDA3Q9Y5J5 127 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 RAI1Q7Z5J4 1906 aaPredicted RBP6.63□□□□□ -1.35
SH3D19-202ENST00000409252 CLDN34H7C241 214 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 FCN3O75636 299 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 NMBP08949 121 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 ATP5G3P48201 142 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 UBE2E2Q96LR5 201 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 SHANK2-AS3Q9BTD1 123 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 NRN1Q9NPD7 142 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 DOCK11Q5JSL3 2073 aa6.63□□□□□ -1.35
SH3D19-202ENST00000409252 DEFB131AP59861 70 aa6.62□□□□□ -1.35
SH3D19-202ENST00000409252 IBA57Q5T440 356 aaKnown RBP6.62□□□□□ -1.35
SH3D19-202ENST00000409252 SEPSECSQ9HD40 501 aaKnown RBP6.62□□□□□ -1.35
SH3D19-202ENST00000409252 MRPL27Q9P0M9 148 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms