RNA–Protein interactions for RNA: ENST00000409189.7

CCL20-202, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCL20, Length 839 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-202ENST00000409189 RBFOX3A6NFN3 312 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 B4DSR2 109 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 G3V4G9 280 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 NPFFO15130 113 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 MT-CO2P00403 227 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 HLA-DRB1P01911 266 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 APOC3P02656 99 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 OPN1MWP04001 364 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 FAM106CPP0CH98 169 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 OPN1MW2P0DN77 364 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 OPN1MW3P0DN78 364 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 OR13C7P0DN81 318 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 TMEM11P17152 192 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 PSMB3P49720 205 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 BPIFB3P59826 476 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 SELENOTP62341 195 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 PRB3Q04118 309 aaPredicted RBP5.12□□□□□ -1.59
CCL20-202ENST00000409189 SSX2Q16385 188 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 RPP25LQ8N5L8 163 aaKnown RBP5.12□□□□□ -1.59
CCL20-202ENST00000409189 THAP8Q8NA92 274 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 OR10W1Q8NGF6 305 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 RNF2Q99496 336 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 SCRT1Q9BWW7 348 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 MRPL32Q9BYC8 188 aaKnown RBP5.12□□□□□ -1.59
CCL20-202ENST00000409189 KRTAP4-4Q9BYR3 166 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 EIF5A2Q9GZV4 153 aaKnown RBP5.12□□□□□ -1.59
CCL20-202ENST00000409189 SLC35B3Q9H1N7 401 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 FBXL15Q9H469 300 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 TMEM231Q9H6L2 316 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 VSIRQ9H7M9 311 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 SLC39A9Q9NUM3 307 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 FAM96BQ9Y3D0 163 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 HILPDAQ9Y5L2 63 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 CSMD3Q7Z407 3707 aa5.12□□□□□ -1.59
CCL20-202ENST00000409189 ARHGAP32A7KAX9 2087 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 PLXNB1O43157 2135 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 TRAV40A0A0B4J280 105 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 IGHV1-69DA0A0B4J2H0 117 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 NPIPB5A8MRT5 1133 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 J3QLI3 93 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 SCGB2A1O75556 95 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 YIF1AO95070 293 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 IGHV1-69P01742 117 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 CRYGCP07315 174 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 FBP1P09467 338 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 STAG3L2P0CL84 134 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 STAG3L3P0CL85 134 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 CNTFRP26992 372 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 KRTAP10-3P60369 221 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 RHOBP62745 196 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 GNB1P62873 340 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 DEFA5Q01523 94 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 CFHR3Q02985 330 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 GAMTQ14353 236 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 HES1Q14469 280 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 HNF4GQ14541 408 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 FAM122CQ6P4D5 195 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 LCN15Q6UWW0 184 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 RBMS3Q6XE24 437 aaKnown RBP5.11□□□□□ -1.59
CCL20-202ENST00000409189 SSX7Q7RTT5 188 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 NANPQ8TBE9 248 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 SUN5Q8TC36 379 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 TMEM190Q8WZ59 177 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 ARPC1AQ92747 370 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 PFDN5Q99471 154 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 TXNDC17Q9BRA2 123 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 NKX6-2Q9C056 277 aaPredicted RBP5.11□□□□□ -1.59
CCL20-202ENST00000409189 VAX2Q9UIW0 290 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 RFNGQ9Y644 331 aa5.11□□□□□ -1.59
CCL20-202ENST00000409189 CENPVL3A0A0U1RRI6 287 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 A0A1B0GV50 99 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 A0A1W2PPV4 95 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 TCRBV4S1A1TA0A5B7 111 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 ZFP92A6NM28 416 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 E7EUB6 86 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 TMEM250H0YL14 139 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 CXorf1O96002 111 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 TOMM40O96008 361 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 FABP1P07148 127 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 OR5G3P0C626 314 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 AREGP15514 252 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 CTRB1P17538 263 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 PAX6P26367 422 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 TAS2R45P59539 299 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 MEF2BQ02080 365 aaPredicted RBP5.1□□□□□ -1.59
CCL20-202ENST00000409189 PNRC1Q12796 327 aaPredicted RBP5.1□□□□□ -1.59
CCL20-202ENST00000409189 RHEBQ15382 184 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 MIC13Q5XKP0 118 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 CTRB2Q6GPI1 263 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 ZNF562Q6V9R5 426 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 C9orf47Q6ZRZ4 202 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 CYP2G1PQ6ZSU1 146 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 DYNAPQ8N1N2 210 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 TMEM116Q8NCL8 245 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 OR1L4Q8NGR5 311 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 MRAPQ8TCY5 172 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 SSMEM1Q8WWF3 244 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 TMEM68Q96MH6 324 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 TRGV9Q99603 122 aa5.1□□□□□ -1.59
CCL20-202ENST00000409189 FNDC4Q9H6D8 234 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms