RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 HELZP42694 1942 aaKnown RBP11.47□□□□□ -0.57
ITGA6-202ENST00000409080 ZNF833PQ6ZTB9 187 aa11.47□□□□□ -0.57
ITGA6-202ENST00000409080 GGTLC1Q9BX51 225 aa11.47□□□□□ -0.57
ITGA6-202ENST00000409080 NDUFB8O95169 186 aa11.47□□□□□ -0.57
ITGA6-202ENST00000409080 TRGC2P03986 189 aa11.47□□□□□ -0.57
ITGA6-202ENST00000409080 VPREB3Q9UKI3 123 aa11.47□□□□□ -0.57
ITGA6-202ENST00000409080 HOXA3O43365 443 aaPredicted RBP11.46□□□□□ -0.57
ITGA6-202ENST00000409080 IGKV1-5P01602 117 aa11.46□□□□□ -0.57
ITGA6-202ENST00000409080 MDKP21741 143 aaPredicted RBP11.46□□□□□ -0.57
ITGA6-202ENST00000409080 RPL36AP83881 106 aaKnown RBP11.46□□□□□ -0.57
ITGA6-202ENST00000409080 RPL36ALQ969Q0 106 aaKnown RBP11.46□□□□□ -0.57
ITGA6-202ENST00000409080 TRAV3A0A0B4J244 114 aa11.46□□□□□ -0.57
ITGA6-202ENST00000409080 C7orf71A4D174 169 aa11.46□□□□□ -0.57
ITGA6-202ENST00000409080 OR11H1Q8NG94 326 aa11.46□□□□□ -0.57
ITGA6-202ENST00000409080 OR11H2Q8NH07 326 aa11.46□□□□□ -0.57
ITGA6-202ENST00000409080 FCN3O75636 299 aa11.46□□□□□ -0.57
ITGA6-202ENST00000409080 ADORA2A-AS1P86434 159 aa11.46□□□□□ -0.57
ITGA6-202ENST00000409080 FOXL1Q12952 345 aa11.46□□□□□ -0.57
ITGA6-202ENST00000409080 SCRT1Q9BWW7 348 aa11.46□□□□□ -0.57
ITGA6-202ENST00000409080 SPRY4Q9C004 299 aa11.46□□□□□ -0.57
ITGA6-202ENST00000409080 TRGV1A0A0A0MS02 117 aa11.46□□□□□ -0.58
ITGA6-202ENST00000409080 RNF222A6NCQ9 220 aa11.46□□□□□ -0.58
ITGA6-202ENST00000409080 NDPQ00604 133 aa11.46□□□□□ -0.58
ITGA6-202ENST00000409080 PUSL1Q8N0Z8 303 aaKnown RBP11.45□□□□□ -0.58
ITGA6-202ENST00000409080 OR13C6PQ8NH95 151 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 SRRM4A7MD48 611 aaKnown RBP11.45□□□□□ -0.58
ITGA6-202ENST00000409080 SRP19P09132 144 aaKnown RBP11.45□□□□□ -0.58
ITGA6-202ENST00000409080 GRNP28799 593 aaKnown RBP11.45□□□□□ -0.58
ITGA6-202ENST00000409080 RNF126Q9BV68 326 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 TOMM7Q9P0U1 55 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 H3BUA1 57 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 TMEM249Q2WGJ8 235 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 KIAA1644Q3SXP7 199 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 ZNF414Q96IQ9 312 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 OSTCQ9NRP0 149 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 IGHV2-70P01814 119 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 HOXA5P20719 270 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 VCX2Q9H322 139 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 NRN1Q9NPD7 142 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 CNTFRP26992 372 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 TMEM14EPQ6UXP3 125 aa11.45□□□□□ -0.58
ITGA6-202ENST00000409080 ROS1P08922 2347 aa11.44□□□□□ -0.58
ITGA6-202ENST00000409080 ZNF407Q9C0G0 2248 aa11.44□□□□□ -0.58
ITGA6-202ENST00000409080 TGIF2-C20orf24A0A0A6YYL0 155 aa11.44□□□□□ -0.58
ITGA6-202ENST00000409080 HIGD1CA8MV81 97 aa11.44□□□□□ -0.58
ITGA6-202ENST00000409080 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.44□□□□□ -0.58
ITGA6-202ENST00000409080 PSCAO43653 123 aa11.44□□□□□ -0.58
ITGA6-202ENST00000409080 HIST1H4GQ99525 98 aa11.44□□□□□ -0.58
ITGA6-202ENST00000409080 POLEQ07864 2286 aa11.44□□□□□ -0.58
ITGA6-202ENST00000409080 USF3Q68DE3 2245 aa11.44□□□□□ -0.58
ITGA6-202ENST00000409080 RNASE2P10153 161 aaKnown RBP11.44□□□□□ -0.58
ITGA6-202ENST00000409080 ZMAT4Q9H898 229 aa11.44□□□□□ -0.58
ITGA6-202ENST00000409080 MUC21A0A0G2JKD1 596 aa11.44□□□□□ -0.58
ITGA6-202ENST00000409080 MUC21A0A140T8X8 626 aa11.44□□□□□ -0.58
ITGA6-202ENST00000409080 TSSC4Q9Y5U2 329 aaPredicted RBP11.44□□□□□ -0.58
ITGA6-202ENST00000409080 APOHP02749 345 aaPredicted RBP11.44□□□□□ -0.58
ITGA6-202ENST00000409080 IGKV1-16P04430 117 aa11.44□□□□□ -0.58
ITGA6-202ENST00000409080 STAG3L3P0CL85 134 aa11.44□□□□□ -0.58
ITGA6-202ENST00000409080 CDX1P47902 265 aaPredicted RBP11.44□□□□□ -0.58
ITGA6-202ENST00000409080 SPTAN1Q13813 2472 aaKnown RBP11.44□□□□□ -0.58
ITGA6-202ENST00000409080 ADARB2-AS1A8MUL3 147 aa11.43□□□□□ -0.58
ITGA6-202ENST00000409080 GHRHP01286 108 aa11.43□□□□□ -0.58
ITGA6-202ENST00000409080 DEFB131AP59861 70 aa11.43□□□□□ -0.58
ITGA6-202ENST00000409080 YPEL3P61236 119 aaPredicted RBP11.43□□□□□ -0.58
ITGA6-202ENST00000409080 LBHQ53QV2 105 aaPredicted RBP11.43□□□□□ -0.58
ITGA6-202ENST00000409080 PRO1933Q9H354 126 aa11.43□□□□□ -0.58
ITGA6-202ENST00000409080 SLC17A3O00476 420 aa11.43□□□□□ -0.58
ITGA6-202ENST00000409080 BTCP35070 178 aa11.43□□□□□ -0.58
ITGA6-202ENST00000409080 MST1LQ2TV78 715 aa11.43□□□□□ -0.58
ITGA6-202ENST00000409080 ORMDL2Q53FV1 153 aa11.43□□□□□ -0.58
ITGA6-202ENST00000409080 WFDC12Q8WWY7 111 aa11.43□□□□□ -0.58
ITGA6-202ENST00000409080 PAM16Q9Y3D7 125 aa11.43□□□□□ -0.58
ITGA6-202ENST00000409080 ZNF503-AS2A6NEH8 195 aa11.43□□□□□ -0.58
ITGA6-202ENST00000409080 FOXA3P55318 350 aaPredicted RBP11.43□□□□□ -0.58
ITGA6-202ENST00000409080 IL17RELQ6ZVW7 336 aa11.43□□□□□ -0.58
ITGA6-202ENST00000409080 CIDEAO60543 219 aa11.43□□□□□ -0.58
ITGA6-202ENST00000409080 TDGF1P3P51864 188 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 TCF23Q7RTU1 214 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 MBD3L1Q8WWY6 194 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 PMCHL2Q9BQD1 86 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 CYSLTR1Q9Y271 337 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 IGKV2-40A0A087WW87 121 aaPredicted RBP11.42□□□□□ -0.58
ITGA6-202ENST00000409080 A0A1W2PPI3 338 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 NPIPB5A8MRT5 1133 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 NDUFA4O00483 81 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 IGKV2D-40P01614 121 aaPredicted RBP11.42□□□□□ -0.58
ITGA6-202ENST00000409080 SMIM6P0DI80 62 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 SRSF1Q07955 248 aaKnown RBP eCLIP11.42□□□□□ -0.58
ITGA6-202ENST00000409080 PDE6HQ13956 83 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 PSG3Q16557 428 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 CBLN1P23435 193 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 CFPP27918 469 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 C17orf58Q2M2W7 97 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 NXT2Q9NPJ8 142 aaKnown RBP11.42□□□□□ -0.58
ITGA6-202ENST00000409080 TRAV5A0A0B4J249 113 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 LY6G6FQ5SQ64 297 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 DNLZQ5SXM8 178 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 C8orf31Q8N9H6 132 aa11.42□□□□□ -0.58
ITGA6-202ENST00000409080 TRAV12-3A0A0B4J271 114 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 H3BVH4 76 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms