RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 M0R143 59 aa13.18□□□□□ -0.3
COL23A1-202ENST00000407622 BTF3P20290 206 aaKnown RBP13.18□□□□□ -0.3
COL23A1-202ENST00000407622 SSX8Q7RTT4 187 aa13.18□□□□□ -0.3
COL23A1-202ENST00000407622 WIPF2Q8TF74 440 aaPredicted RBP13.18□□□□□ -0.3
COL23A1-202ENST00000407622 CLEC7AQ9BXN2 247 aa13.18□□□□□ -0.3
COL23A1-202ENST00000407622 HRNRQ86YZ3 2850 aaPredicted RBP13.17□□□□□ -0.3
COL23A1-202ENST00000407622 LY6HO94772 140 aa13.17□□□□□ -0.3
COL23A1-202ENST00000407622 CAMPP49913 170 aa13.17□□□□□ -0.3
COL23A1-202ENST00000407622 PRRX1P54821 245 aa13.17□□□□□ -0.3
COL23A1-202ENST00000407622 TCF24Q7RTU0 167 aa13.17□□□□□ -0.3
COL23A1-202ENST00000407622 KLF12Q9Y4X4 402 aa13.17□□□□□ -0.3
COL23A1-202ENST00000407622 PPIAL4CA0A0B4J2A2 164 aa13.17□□□□□ -0.3
COL23A1-202ENST00000407622 PPIAL4GP0DN37 164 aa13.17□□□□□ -0.3
COL23A1-202ENST00000407622 PRB4P10163 310 aaPredicted RBP13.17□□□□□ -0.3
COL23A1-202ENST00000407622 NTF3P20783 257 aa13.17□□□□□ -0.3
COL23A1-202ENST00000407622 STXBP6Q8NFX7 210 aa13.17□□□□□ -0.3
COL23A1-202ENST00000407622 C22orf15Q8WYQ4 148 aa13.17□□□□□ -0.3
COL23A1-202ENST00000407622 TNFRSF14Q92956 283 aa13.17□□□□□ -0.3
COL23A1-202ENST00000407622 MLST8Q9BVC4 326 aa13.17□□□□□ -0.3
COL23A1-202ENST00000407622 Q9H3A6 140 aa13.17□□□□□ -0.3
COL23A1-202ENST00000407622 SVEP1Q4LDE5 3571 aa13.16□□□□□ -0.3
COL23A1-202ENST00000407622 FAM90A27PA6NNH2 459 aa13.16□□□□□ -0.3
COL23A1-202ENST00000407622 PSG1P11464 419 aa13.16□□□□□ -0.3
COL23A1-202ENST00000407622 LYZP61626 148 aa13.16□□□□□ -0.3
COL23A1-202ENST00000407622 SRSF12Q8WXF0 261 aaKnown RBP13.16□□□□□ -0.3
COL23A1-202ENST00000407622 MIEN1Q9BRT3 115 aa13.16□□□□□ -0.3
COL23A1-202ENST00000407622 A6NNC1 897 aa13.16□□□□□ -0.3
COL23A1-202ENST00000407622 TCAPO15273 167 aa13.16□□□□□ -0.3
COL23A1-202ENST00000407622 C3orf79P0CE67 100 aa13.16□□□□□ -0.3
COL23A1-202ENST00000407622 IGLC1P0CG04 106 aa13.16□□□□□ -0.3
COL23A1-202ENST00000407622 HIST1H1EP10412 219 aaKnown RBP13.16□□□□□ -0.3
COL23A1-202ENST00000407622 MUC15Q8N387 334 aa13.16□□□□□ -0.3
COL23A1-202ENST00000407622 C8orf46Q8TAG6 207 aa13.16□□□□□ -0.3
COL23A1-202ENST00000407622 RPEQ96AT9 228 aa13.16□□□□□ -0.3
COL23A1-202ENST00000407622 GPR82Q96P67 336 aa13.16□□□□□ -0.3
COL23A1-202ENST00000407622 TRAV8-1A0A0A6YYK1 113 aa13.15□□□□□ -0.3
COL23A1-202ENST00000407622 TOX4O94842 621 aa13.15□□□□□ -0.3
COL23A1-202ENST00000407622 CD24P25063 80 aa13.15□□□□□ -0.3
COL23A1-202ENST00000407622 TCRAP04437 139 aa13.14□□□□□ -0.31
COL23A1-202ENST00000407622 LY6DQ14210 128 aa13.14□□□□□ -0.31
COL23A1-202ENST00000407622 ITPR1Q14643 2758 aa13.14□□□□□ -0.31
COL23A1-202ENST00000407622 RASL11AQ6T310 242 aa13.14□□□□□ -0.31
COL23A1-202ENST00000407622 C5orf17Q8NAS9 161 aa13.14□□□□□ -0.31
COL23A1-202ENST00000407622 VKORC1Q9BQB6 163 aa13.14□□□□□ -0.31
COL23A1-202ENST00000407622 A0A1B0GXF2 115 aa13.14□□□□□ -0.31
COL23A1-202ENST00000407622 I3L2K1 104 aa13.14□□□□□ -0.31
COL23A1-202ENST00000407622 PLP1P60201 277 aa13.14□□□□□ -0.31
COL23A1-202ENST00000407622 FBLN7Q53RD9 439 aa13.14□□□□□ -0.31
COL23A1-202ENST00000407622 GTSF1Q8WW33 167 aa13.14□□□□□ -0.31
COL23A1-202ENST00000407622 HIGD1AQ9Y241 93 aa13.14□□□□□ -0.31
COL23A1-202ENST00000407622 LY6LH3BQJ8 138 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 TOMM40O96008 361 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 LTAP01374 205 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 EXOC3-AS1Q8N2X6 119 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 ALKBH7Q9BT30 221 aaPredicted RBP13.13□□□□□ -0.31
COL23A1-202ENST00000407622 ONECUT1Q9UBC0 465 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 ATRXP46100 2492 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 TMEM8BA6NDV4 472 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 SFTPCP11686 197 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 CTRLP40313 264 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 PLGLAQ15195 96 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 CDSNQ15517 529 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 ZNF672Q499Z4 452 aaPredicted RBP13.13□□□□□ -0.31
COL23A1-202ENST00000407622 OR2D3Q8NGH3 330 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 SLC25A39Q9BZJ4 359 aaPredicted RBP13.13□□□□□ -0.31
COL23A1-202ENST00000407622 PRSS22Q9GZN4 317 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 WNT10AQ9GZT5 417 aa13.13□□□□□ -0.31
COL23A1-202ENST00000407622 RPP21Q9H633 154 aaKnown RBP13.13□□□□□ -0.31
COL23A1-202ENST00000407622 ASH1LQ9NR48 2969 aaKnown RBP13.13□□□□□ -0.31
COL23A1-202ENST00000407622 TIMM23O14925 209 aa13.12□□□□□ -0.31
COL23A1-202ENST00000407622 IGKV1-17P01599 117 aa13.12□□□□□ -0.31
COL23A1-202ENST00000407622 RBP4P02753 201 aa13.12□□□□□ -0.31
COL23A1-202ENST00000407622 PAX2Q02962 417 aa13.12□□□□□ -0.31
COL23A1-202ENST00000407622 LCN12Q6JVE5 192 aa13.12□□□□□ -0.31
COL23A1-202ENST00000407622 ASCL2Q99929 193 aa13.12□□□□□ -0.31
COL23A1-202ENST00000407622 MRPL27Q9P0M9 148 aaKnown RBP13.12□□□□□ -0.31
COL23A1-202ENST00000407622 C19orf71A6NCJ1 209 aa13.12□□□□□ -0.31
COL23A1-202ENST00000407622 ATOH7Q8N100 152 aa13.12□□□□□ -0.31
COL23A1-202ENST00000407622 FMC1Q96HJ9 113 aa13.12□□□□□ -0.31
COL23A1-202ENST00000407622 G0S2P27469 103 aa13.11□□□□□ -0.31
COL23A1-202ENST00000407622 CA7P43166 264 aa13.11□□□□□ -0.31
COL23A1-202ENST00000407622 SPATA45Q537H7 98 aa13.11□□□□□ -0.31
COL23A1-202ENST00000407622 CIARTQ8N365 385 aaPredicted RBP13.11□□□□□ -0.31
COL23A1-202ENST00000407622 OR4B1Q8NGF8 309 aa13.11□□□□□ -0.31
COL23A1-202ENST00000407622 PGLYRP4Q96LB8 373 aa13.11□□□□□ -0.31
COL23A1-202ENST00000407622 CHRDL1Q9BU40 450 aa13.11□□□□□ -0.31
COL23A1-202ENST00000407622 S4R3C0 116 aa13.11□□□□□ -0.31
COL23A1-202ENST00000407622 OR2J3O76001 311 aa13.11□□□□□ -0.31
COL23A1-202ENST00000407622 KLF5Q13887 457 aaPredicted RBP13.11□□□□□ -0.31
COL23A1-202ENST00000407622 MMDQ15546 238 aa13.11□□□□□ -0.31
COL23A1-202ENST00000407622 MAJINQ3KP22 176 aa13.11□□□□□ -0.31
COL23A1-202ENST00000407622 URB1-AS1Q96HZ7 61 aa13.11□□□□□ -0.31
COL23A1-202ENST00000407622 C17orf77Q96MU5 243 aa13.11□□□□□ -0.31
COL23A1-202ENST00000407622 HILPDAQ9Y5L2 63 aa13.11□□□□□ -0.31
COL23A1-202ENST00000407622 K7EIM0 57 aa13.1□□□□□ -0.31
COL23A1-202ENST00000407622 M0QZ24 198 aa13.1□□□□□ -0.31
COL23A1-202ENST00000407622 CNIH1O95406 144 aa13.1□□□□□ -0.31
COL23A1-202ENST00000407622 IGLV2-11P01706 119 aa13.1□□□□□ -0.31
COL23A1-202ENST00000407622 P01737 135 aa13.1□□□□□ -0.31
COL23A1-202ENST00000407622 KLRD1Q13241 179 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms