RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 ZNF292O60281 2723 aa12.8□□□□□ -0.36
CCDC85A-201ENST00000407595 MUC21A0A0G2JKD1 596 aa12.8□□□□□ -0.36
CCDC85A-201ENST00000407595 MUC21A0A140T8X8 626 aa12.8□□□□□ -0.36
CCDC85A-201ENST00000407595 IGKV1-16P04430 117 aa12.8□□□□□ -0.36
CCDC85A-201ENST00000407595 NMUP48645 174 aa12.8□□□□□ -0.36
CCDC85A-201ENST00000407595 MUC21Q5SSG8 566 aa12.8□□□□□ -0.36
CCDC85A-201ENST00000407595 NUDT10Q8NFP7 164 aa12.8□□□□□ -0.36
CCDC85A-201ENST00000407595 NUDT11Q96G61 164 aa12.8□□□□□ -0.36
CCDC85A-201ENST00000407595 YPEL1O60688 119 aa12.8□□□□□ -0.36
CCDC85A-201ENST00000407595 ZNF138P52744 262 aa12.8□□□□□ -0.36
CCDC85A-201ENST00000407595 SRSF12Q8WXF0 261 aaKnown RBP12.8□□□□□ -0.36
CCDC85A-201ENST00000407595 GRAMD2BQ96HH9 432 aa12.8□□□□□ -0.36
CCDC85A-201ENST00000407595 YPEL2Q96QA6 119 aa12.8□□□□□ -0.36
CCDC85A-201ENST00000407595 KLRD1Q13241 179 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 PPP1R14DQ9NXH3 145 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 V9GYV3 84 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 J3KRW8 73 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 CLEC3BP05452 202 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 NBEAP1P0C6P0 100 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 TMEM200BQ69YZ2 307 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 HIF1ANQ9NWT6 349 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 USP34Q70CQ2 3546 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 COMPP49747 757 aaPredicted RBP12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 IGHV3-49A0A0A0MS15 119 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 HLA-DRB1P01911 266 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 GOLT1AQ6ZVE7 132 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 STXBP6Q8NFX7 210 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 LINC00312Q9Y6C7 94 aa12.79□□□□□ -0.36
CCDC85A-201ENST00000407595 TANC2Q9HCD6 1990 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 A0A1W2PRE2 83 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 FAM181BA6NEQ2 426 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 LIPFP07098 398 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 ERVK11-1P61568 191 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 SLAQ13239 276 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 UBE2V1Q13404 147 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 TMEM136Q6ZRR5 245 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 NAA38Q9BRA0 125 aaKnown RBP12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 NDUFS7O75251 213 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 GTF2H5Q6ZYL4 71 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 OR4F17Q8NGA8 305 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 CORTO00230 105 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 AMMECR1LQ6DCA0 310 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 NUP35Q8NFH5 326 aa12.78□□□□□ -0.36
CCDC85A-201ENST00000407595 PMS2P5A8MQ11 134 aa12.77□□□□□ -0.36
CCDC85A-201ENST00000407595 TMEM178BH3BS89 294 aa12.77□□□□□ -0.36
CCDC85A-201ENST00000407595 C18orf32Q8TCD1 76 aa12.77□□□□□ -0.36
CCDC85A-201ENST00000407595 GAFA1Q96PS6 74 aa12.77□□□□□ -0.36
CCDC85A-201ENST00000407595 C19orf24Q9BVV8 132 aa12.77□□□□□ -0.36
CCDC85A-201ENST00000407595 WNT2P09544 360 aa12.77□□□□□ -0.37
CCDC85A-201ENST00000407595 CEACAM8P31997 349 aaPredicted RBP12.77□□□□□ -0.37
CCDC85A-201ENST00000407595 SELENOTP62341 195 aa12.77□□□□□ -0.37
CCDC85A-201ENST00000407595 RASL11BQ9BPW5 248 aa12.77□□□□□ -0.37
CCDC85A-201ENST00000407595 RPUSD1Q9UJJ7 312 aaKnown RBP12.77□□□□□ -0.37
CCDC85A-201ENST00000407595 RIGQ13278 110 aa12.77□□□□□ -0.37
CCDC85A-201ENST00000407595 C11orf53Q8IXP5 236 aa12.77□□□□□ -0.37
CCDC85A-201ENST00000407595 OR52E5Q8NH55 327 aa12.77□□□□□ -0.37
CCDC85A-201ENST00000407595 F11RQ9Y624 299 aaKnown RBP12.77□□□□□ -0.37
CCDC85A-201ENST00000407595 ZNF785A8K8V0 405 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 UPK2O00526 184 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 PRSS1P07477 247 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 DAZAP2Q15038 168 aaPredicted RBP12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 C5orf17Q8NAS9 161 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 MRPL32Q9BYC8 188 aaKnown RBP12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 AP5S1Q9NUS5 200 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 LINC00527Q9UJ94 153 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 GGTLC3B5MD39 225 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 VDAC2P45880 294 aaPredicted RBP12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 ZNF134P52741 427 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 RELQ04864 619 aaPredicted RBP12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 KRTAP27-1Q3LI81 207 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 TM4SF20Q53R12 229 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 FAM168AQ92567 244 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 SLC25A33Q9BSK2 321 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 MUC3AQ02505 3323 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 FRYQ5TBA9 3013 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 MC5RP33032 325 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 CD69Q07108 199 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 IGFL2Q6UWQ7 119 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 C5orf30Q96GV9 206 aa12.76□□□□□ -0.37
CCDC85A-201ENST00000407595 ACANP16112 2415 aa12.75□□□□□ -0.37
CCDC85A-201ENST00000407595 IGLV1-44P01699 117 aa12.75□□□□□ -0.37
CCDC85A-201ENST00000407595 WFDC3Q8IUB2 231 aa12.75□□□□□ -0.37
CCDC85A-201ENST00000407595 TMEM186Q96B77 213 aa12.75□□□□□ -0.37
CCDC85A-201ENST00000407595 GAGE1Q13065 139 aa12.75□□□□□ -0.37
CCDC85A-201ENST00000407595 COX11Q9Y6N1 276 aa12.75□□□□□ -0.37
CCDC85A-201ENST00000407595 IGLL1P15814 213 aa12.75□□□□□ -0.37
CCDC85A-201ENST00000407595 CLEC2AQ6UVW9 174 aa12.75□□□□□ -0.37
CCDC85A-201ENST00000407595 A0A087X0K7 114 aa12.74□□□□□ -0.37
CCDC85A-201ENST00000407595 APOHP02749 345 aaPredicted RBP12.74□□□□□ -0.37
CCDC85A-201ENST00000407595 TMEM116Q8NCL8 245 aa12.74□□□□□ -0.37
CCDC85A-201ENST00000407595 GPR82Q96P67 336 aa12.74□□□□□ -0.37
CCDC85A-201ENST00000407595 AAMDCQ9H7C9 122 aa12.74□□□□□ -0.37
CCDC85A-201ENST00000407595 PRCDQ00LT1 54 aa12.74□□□□□ -0.37
CCDC85A-201ENST00000407595 KLF17Q5JT82 389 aaPredicted RBP12.74□□□□□ -0.37
CCDC85A-201ENST00000407595 SAPCD1Q5SSQ6 148 aa12.74□□□□□ -0.37
CCDC85A-201ENST00000407595 ZNF788Q6ZQV5 615 aa12.74□□□□□ -0.37
CCDC85A-201ENST00000407595 RPP21Q9H633 154 aaKnown RBP12.74□□□□□ -0.37
CCDC85A-201ENST00000407595 HIGD1AQ9Y241 93 aa12.74□□□□□ -0.37
CCDC85A-201ENST00000407595 A6NDN8 102 aa12.74□□□□□ -0.37
CCDC85A-201ENST00000407595 DIAPH2-AS1Q14236 149 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms