RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 WI2-2373I1.2A0A1W2PRP0 233 aa13.05□□□□□ -0.32
IRF1-202ENST00000405885 RPLP1P05386 114 aaKnown RBP13.05□□□□□ -0.32
IRF1-202ENST00000405885 CD81P60033 236 aa13.05□□□□□ -0.32
IRF1-202ENST00000405885 SRSF2Q01130 221 aaKnown RBP13.05□□□□□ -0.32
IRF1-202ENST00000405885 Q6ZSV7 163 aa13.05□□□□□ -0.32
IRF1-202ENST00000405885 Q8WTZ3 238 aa13.05□□□□□ -0.32
IRF1-202ENST00000405885 MRPL32Q9BYC8 188 aaKnown RBP13.05□□□□□ -0.32
IRF1-202ENST00000405885 SLC25A39Q9BZJ4 359 aaPredicted RBP13.05□□□□□ -0.32
IRF1-202ENST00000405885 ZNF580Q9UK33 172 aa13.05□□□□□ -0.32
IRF1-202ENST00000405885 HIGD1AQ9Y241 93 aa13.05□□□□□ -0.32
IRF1-202ENST00000405885 YTHDF2Q9Y5A9 579 aaKnown RBP13.05□□□□□ -0.32
IRF1-202ENST00000405885 KRBOX1C9JBD0 128 aa13.04□□□□□ -0.32
IRF1-202ENST00000405885 F8W036 122 aa13.04□□□□□ -0.32
IRF1-202ENST00000405885 H3BUA1 57 aa13.04□□□□□ -0.32
IRF1-202ENST00000405885 TGOLN2O43493 480 aa13.04□□□□□ -0.32
IRF1-202ENST00000405885 OR2C1O95371 312 aa13.04□□□□□ -0.32
IRF1-202ENST00000405885 APOC3P02656 99 aa13.04□□□□□ -0.32
IRF1-202ENST00000405885 ATP5G3P48201 142 aa13.04□□□□□ -0.32
IRF1-202ENST00000405885 Q8N2B8 174 aa13.04□□□□□ -0.32
IRF1-202ENST00000405885 CYB561D1Q8N8Q1 229 aa13.04□□□□□ -0.32
IRF1-202ENST00000405885 SRP19P09132 144 aaKnown RBP13.04□□□□□ -0.32
IRF1-202ENST00000405885 KHDC3LQ587J8 217 aa13.04□□□□□ -0.32
IRF1-202ENST00000405885 TOMM20LQ6UXN7 152 aa13.04□□□□□ -0.32
IRF1-202ENST00000405885 VAX2Q9UIW0 290 aa13.04□□□□□ -0.32
IRF1-202ENST00000405885 TEP1Q99973 2627 aaKnown RBP13.04□□□□□ -0.32
IRF1-202ENST00000405885 H3BTX0 84 aa13.03□□□□□ -0.32
IRF1-202ENST00000405885 BRI3O95415 125 aa13.03□□□□□ -0.32
IRF1-202ENST00000405885 FABP1P07148 127 aa13.03□□□□□ -0.32
IRF1-202ENST00000405885 PSMB3P49720 205 aa13.03□□□□□ -0.32
IRF1-202ENST00000405885 GUCA2BQ16661 112 aa13.03□□□□□ -0.32
IRF1-202ENST00000405885 CST9LP1Q5W188 147 aa13.03□□□□□ -0.32
IRF1-202ENST00000405885 OR4X2Q8NGF9 303 aa13.03□□□□□ -0.32
IRF1-202ENST00000405885 SLC35B3Q9H1N7 401 aa13.03□□□□□ -0.32
IRF1-202ENST00000405885 TAS2R45P59539 299 aa13.03□□□□□ -0.32
IRF1-202ENST00000405885 MEF2BQ02080 365 aaPredicted RBP13.03□□□□□ -0.32
IRF1-202ENST00000405885 USMG5Q96IX5 58 aa13.03□□□□□ -0.32
IRF1-202ENST00000405885 LOC105371267A0A1B0GV96 52 aa13.02□□□□□ -0.33
IRF1-202ENST00000405885 SCO1O75880 301 aa13.02□□□□□ -0.33
IRF1-202ENST00000405885 IFNA1P01562 189 aa13.02□□□□□ -0.33
IRF1-202ENST00000405885 ARL3P36405 182 aa13.02□□□□□ -0.33
IRF1-202ENST00000405885 UBE2L3P68036 154 aaKnown RBP13.02□□□□□ -0.33
IRF1-202ENST00000405885 TEX38Q6PEX7 206 aa13.02□□□□□ -0.33
IRF1-202ENST00000405885 PQLC2Q6ZP29 291 aa13.02□□□□□ -0.33
IRF1-202ENST00000405885 OR4F5Q8NH21 305 aa13.02□□□□□ -0.33
IRF1-202ENST00000405885 OR4F4Q96R69 305 aa13.02□□□□□ -0.33
IRF1-202ENST00000405885 ZFAND3Q9H8U3 227 aa13.02□□□□□ -0.33
IRF1-202ENST00000405885 MANBALQ9NQG1 85 aa13.02□□□□□ -0.33
IRF1-202ENST00000405885 C11orf94C9JXX5 98 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 ZNF207O43670 478 aaKnown RBP13.01□□□□□ -0.33
IRF1-202ENST00000405885 HILS1P60008 231 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 PMS2P11Q13670 270 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 FXYD5Q96DB9 178 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 RNF2Q99496 336 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 PAXXQ9BUH6 204 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 OR51M1Q9H341 326 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 IGHV3OR16-13A0A075B7E8 117 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 IGHV3-74A0A0B4J1X5 117 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 FAM74A7A6NL05 159 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 CLDN34H7C241 214 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 UNQ9165/PRO28630Q6UXU0 137 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 ZNF600Q6ZNG1 722 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 SHANK2-AS3Q9BTD1 123 aa13.01□□□□□ -0.33
IRF1-202ENST00000405885 IGHV3-49A0A0A0MS15 119 aa13□□□□□ -0.33
IRF1-202ENST00000405885 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13□□□□□ -0.33
IRF1-202ENST00000405885 CLPSL1A2RUU4 121 aa13□□□□□ -0.33
IRF1-202ENST00000405885 RNASE1P07998 156 aaKnown RBP13□□□□□ -0.33
IRF1-202ENST00000405885 GP9P14770 177 aa13□□□□□ -0.33
IRF1-202ENST00000405885 RPL15P61313 204 aaKnown RBP13□□□□□ -0.33
IRF1-202ENST00000405885 ZNF343Q6P1L6 599 aa13□□□□□ -0.33
IRF1-202ENST00000405885 ATRAIDQ6UW56 229 aa13□□□□□ -0.33
IRF1-202ENST00000405885 ZNF418Q8TF45 676 aaPredicted RBP13□□□□□ -0.33
IRF1-202ENST00000405885 BLNKQ8WV28 456 aa13□□□□□ -0.33
IRF1-202ENST00000405885 SEC11CQ9BY50 192 aa13□□□□□ -0.33
IRF1-202ENST00000405885 JMJD1CQ15652 2540 aa13□□□□□ -0.33
IRF1-202ENST00000405885 IGHV3-66A0A0C4DH42 116 aa13□□□□□ -0.33
IRF1-202ENST00000405885 A0A0G2JLM5 398 aa13□□□□□ -0.33
IRF1-202ENST00000405885 H3BRN7 92 aa13□□□□□ -0.33
IRF1-202ENST00000405885 BMPR1BO00238 502 aa13□□□□□ -0.33
IRF1-202ENST00000405885 SLC35B1P78383 322 aa13□□□□□ -0.33
IRF1-202ENST00000405885 C10orf91Q5T1B1 145 aa13□□□□□ -0.33
IRF1-202ENST00000405885 C18orf65Q6ZTR6 163 aa13□□□□□ -0.33
IRF1-202ENST00000405885 KLHDC1Q8N7A1 406 aa13□□□□□ -0.33
IRF1-202ENST00000405885 C20orf24Q9BUV8 137 aa13□□□□□ -0.33
IRF1-202ENST00000405885 GAR1Q9NY12 217 aaKnown RBP13□□□□□ -0.33
IRF1-202ENST00000405885 ZNF98A6NK75 572 aa12.99□□□□□ -0.33
IRF1-202ENST00000405885 SCGB2A1O75556 95 aa12.99□□□□□ -0.33
IRF1-202ENST00000405885 APOHP02749 345 aaPredicted RBP12.99□□□□□ -0.33
IRF1-202ENST00000405885 FOSL1P15407 271 aa12.99□□□□□ -0.33
IRF1-202ENST00000405885 NPPCP23582 126 aa12.99□□□□□ -0.33
IRF1-202ENST00000405885 SCGB2A2Q13296 93 aa12.99□□□□□ -0.33
IRF1-202ENST00000405885 TCTEX1D4Q5JR98 221 aa12.99□□□□□ -0.33
IRF1-202ENST00000405885 GGTLC3B5MD39 225 aa12.98□□□□□ -0.33
IRF1-202ENST00000405885 H3BQ15 152 aa12.98□□□□□ -0.33
IRF1-202ENST00000405885 SOHLH1Q5JUK2 328 aa12.98□□□□□ -0.33
IRF1-202ENST00000405885 FAM90A2PQ658T7 463 aa12.98□□□□□ -0.33
IRF1-202ENST00000405885 SMDT1Q9H4I9 107 aa12.98□□□□□ -0.33
IRF1-202ENST00000405885 TMEM167BQ9NRX6 74 aa12.98□□□□□ -0.33
IRF1-202ENST00000405885 PRB4P10163 310 aaPredicted RBP12.98□□□□□ -0.33
IRF1-202ENST00000405885 FOXE3Q13461 319 aa12.98□□□□□ -0.33
IRF1-202ENST00000405885 SMUG1Q53HV7 270 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms