RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 BPIFCQ8NFQ6 507 aa9.68□□□□□ -0.86
SDF4-203ENST00000403997 LINC00476Q8WZB0 136 aa9.68□□□□□ -0.86
SDF4-203ENST00000403997 SMIM8Q96KF7 97 aa9.68□□□□□ -0.86
SDF4-203ENST00000403997 WDR12Q9GZL7 423 aaKnown RBP9.68□□□□□ -0.86
SDF4-203ENST00000403997 GSKIPQ9P0R6 139 aa9.68□□□□□ -0.86
SDF4-203ENST00000403997 LYRM1O43325 122 aa9.67□□□□□ -0.86
SDF4-203ENST00000403997 ORM2P19652 201 aa9.67□□□□□ -0.86
SDF4-203ENST00000403997 GATA2P23769 480 aaPredicted RBP9.67□□□□□ -0.86
SDF4-203ENST00000403997 GSG1LQ6UXU4 331 aa9.67□□□□□ -0.86
SDF4-203ENST00000403997 TMEM182Q6ZP80 229 aaPredicted RBP9.67□□□□□ -0.86
SDF4-203ENST00000403997 Q8NAQ8 132 aa9.67□□□□□ -0.86
SDF4-203ENST00000403997 MITD1Q8WV92 249 aa9.67□□□□□ -0.86
SDF4-203ENST00000403997 C20orf85Q9H1P6 137 aa9.67□□□□□ -0.86
SDF4-203ENST00000403997 XCL2Q9UBD3 114 aa9.67□□□□□ -0.86
SDF4-203ENST00000403997 TBC1D24Q9ULP9 559 aa9.67□□□□□ -0.86
SDF4-203ENST00000403997 IGHV4-28A0A0C4DH34 117 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 TCRBP04435 133 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 RBMY1A1P0DJD3 496 aaKnown RBP9.66□□□□□ -0.86
SDF4-203ENST00000403997 RBMY1CP0DJD4 496 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 HLA-DRB4P13762 266 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 MIFP14174 115 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 S100A7P31151 101 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 GALR1P47211 349 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 PSMB3P49720 205 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 DEFB1P60022 68 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 RBMY1FQ15415 496 aaKnown RBP9.66□□□□□ -0.86
SDF4-203ENST00000403997 ZBTB8BQ8NAP8 495 aaPredicted RBP9.66□□□□□ -0.86
SDF4-203ENST00000403997 CSNK1G2-AS1Q8NCQ2 148 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 OR1B1Q8NGR6 318 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 TMEM147Q9BVK8 224 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 C1QTNF4Q9BXJ3 329 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 SLC25A22Q9H936 323 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 HLA-DRB4X5D2U9 266 aa9.66□□□□□ -0.86
SDF4-203ENST00000403997 DNAH1Q9P2D7 4330 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 TRAV6A0A075B6T7 132 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 ZNF98A6NK75 572 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 PMS2P5A8MQ11 134 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 ZNF705EA8MWA4 302 aaPredicted RBP9.65□□□□□ -0.86
SDF4-203ENST00000403997 CCNKO75909 580 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 IGKV3-20P01619 116 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 IL5P05113 134 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 METTL15P1P0C7V9 234 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 PAX9P55771 341 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 RRAS2P62070 204 aaPredicted RBP9.65□□□□□ -0.86
SDF4-203ENST00000403997 GDF5OSQ5U4N7 250 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 CYP2G1PQ6ZSU1 146 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 OR10P1Q8NGE3 313 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 C16orf92Q96LL3 132 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 RSG1Q9BU20 258 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 SAV1Q9H4B6 383 aaPredicted RBP9.65□□□□□ -0.86
SDF4-203ENST00000403997 SLC45A2Q9UMX9 530 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 X6R8D5 127 aa9.65□□□□□ -0.86
SDF4-203ENST00000403997 ISLRO14498 428 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 SOCS3O14543 225 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 CCSO14618 274 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 MEOX2P50222 304 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 FXYD7P58549 80 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 TAS2R30P59541 319 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 DLK1P80370 383 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 ZNF846Q147U1 533 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 SAMD13Q5VXD3 122 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 TMEM14EPQ6UXP3 125 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 FOXI2Q6ZQN5 318 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 OR4B1Q8NGF8 309 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 SLC25A32Q9H2D1 315 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 DOK5Q9P104 306 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 MGAT4CQ9UBM8 478 aa9.64□□□□□ -0.87
SDF4-203ENST00000403997 ALMS1Q8TCU4 4167 aa9.63□□□□□ -0.87
SDF4-203ENST00000403997 FAM25EA8MYX2 175 aa9.63□□□□□ -0.87
SDF4-203ENST00000403997 TSC22D2O75157 780 aa9.63□□□□□ -0.87
SDF4-203ENST00000403997 HYPMO75409 117 aa9.63□□□□□ -0.87
SDF4-203ENST00000403997 MBPP02686 304 aaPredicted RBP9.63□□□□□ -0.87
SDF4-203ENST00000403997 EBLN2Q6P2I7 272 aa9.63□□□□□ -0.87
SDF4-203ENST00000403997 SEC22CQ9BRL7 303 aa9.63□□□□□ -0.87
SDF4-203ENST00000403997 CCDC32Q9BV29 185 aa9.63□□□□□ -0.87
SDF4-203ENST00000403997 HRH4Q9H3N8 390 aa9.63□□□□□ -0.87
SDF4-203ENST00000403997 NPVFQ9HCQ7 196 aa9.63□□□□□ -0.87
SDF4-203ENST00000403997 NUDT15Q9NV35 164 aa9.63□□□□□ -0.87
SDF4-203ENST00000403997 ELOA3CA0A087WX78 387 aaPredicted RBP9.62□□□□□ -0.87
SDF4-203ENST00000403997 C5orf51A6NDU8 294 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 FNDC10F2Z333 226 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 F6UB75 175 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 L7N2F9 121 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 H2AFB2P0C5Z0 115 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 OR5G3P0C626 314 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 LINC00869P0C866 280 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 HLA-DMBP28068 263 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 RAP2BP61225 183 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 SELENOTP62341 195 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 VAMP2P63027 116 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 SPATA31B1PQ5VZV4 182 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 ZNF431Q8TF32 576 aaPredicted RBP9.62□□□□□ -0.87
SDF4-203ENST00000403997 C2CD4CQ8TF44 421 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 C20orf173Q96LM9 149 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 GPR82Q96P67 336 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 SCRT1Q9BWW7 348 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 SLC25A39Q9BZJ4 359 aaPredicted RBP9.62□□□□□ -0.87
SDF4-203ENST00000403997 RPRMQ9NS64 109 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 HIGD1AQ9Y241 93 aa9.62□□□□□ -0.87
SDF4-203ENST00000403997 RCL1Q9Y2P8 373 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms