RNA–Protein interactions for RNA: ENST00000400217.6

CSNK2A1-203, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK2A1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-203ENST00000400217 SLC25A39Q9BZJ4 359 aaPredicted RBP13.23□□□□□ -0.29
CSNK2A1-203ENST00000400217 OR51M1Q9H341 326 aa13.23□□□□□ -0.29
CSNK2A1-203ENST00000400217 PUS1Q9Y606 427 aaKnown RBP eCLIP13.23□□□□□ -0.29
CSNK2A1-203ENST00000400217 C11orf94C9JXX5 98 aa13.23□□□□□ -0.29
CSNK2A1-203ENST00000400217 SRD5A1P18405 259 aa13.23□□□□□ -0.29
CSNK2A1-203ENST00000400217 SONP18583 2426 aaKnown RBP13.23□□□□□ -0.29
CSNK2A1-203ENST00000400217 S100A7AQ86SG5 101 aa13.23□□□□□ -0.29
CSNK2A1-203ENST00000400217 TXNDC17Q9BRA2 123 aa13.23□□□□□ -0.29
CSNK2A1-203ENST00000400217 GNB4Q9HAV0 340 aa13.23□□□□□ -0.29
CSNK2A1-203ENST00000400217 ANK3Q12955 4377 aaKnown RBP13.22□□□□□ -0.29
CSNK2A1-203ENST00000400217 FAM74A7A6NL05 159 aa13.22□□□□□ -0.29
CSNK2A1-203ENST00000400217 OR10J4P0C629 311 aa13.22□□□□□ -0.29
CSNK2A1-203ENST00000400217 PSMB8P28062 276 aa13.22□□□□□ -0.29
CSNK2A1-203ENST00000400217 CEBPGP53567 150 aa13.22□□□□□ -0.29
CSNK2A1-203ENST00000400217 SLC35B1P78383 322 aa13.22□□□□□ -0.29
CSNK2A1-203ENST00000400217 USF2Q15853 346 aaPredicted RBP13.22□□□□□ -0.29
CSNK2A1-203ENST00000400217 CCDC28AQ8IWP9 274 aa13.22□□□□□ -0.29
CSNK2A1-203ENST00000400217 OR4F5Q8NH21 305 aa13.22□□□□□ -0.29
CSNK2A1-203ENST00000400217 OR4F4Q96R69 305 aa13.22□□□□□ -0.29
CSNK2A1-203ENST00000400217 SHANK2-AS3Q9BTD1 123 aa13.22□□□□□ -0.29
CSNK2A1-203ENST00000400217 CDC42EP3Q9UKI2 254 aa13.22□□□□□ -0.29
CSNK2A1-203ENST00000400217 ARL2-SNX15V9GYD0 113 aa13.22□□□□□ -0.29
CSNK2A1-203ENST00000400217 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 TMEM250H0YL14 139 aa13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 CLDN34H7C241 214 aa13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 PYYP10082 97 aa13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 CD99P14209 185 aa13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 FOSL1P15407 271 aa13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 ATP5G3P48201 142 aa13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 UBE2L3P68036 154 aaKnown RBP13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 GUCA2BQ16661 112 aa13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 LEMD1Q68G75 181 aa13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 LCNL1Q6ZST4 164 aa13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 SVBPQ8N300 66 aa13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 ZNF414Q96IQ9 312 aa13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 ESM1Q9NQ30 184 aa13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 YTHDF2Q9Y5A9 579 aaKnown RBP13.21□□□□□ -0.3
CSNK2A1-203ENST00000400217 IGHV3-35A0A0C4DH35 117 aa13.2□□□□□ -0.3
CSNK2A1-203ENST00000400217 FAM181BA6NEQ2 426 aa13.2□□□□□ -0.3
CSNK2A1-203ENST00000400217 H3BRN7 92 aa13.2□□□□□ -0.3
CSNK2A1-203ENST00000400217 PDE6DO43924 150 aa13.2□□□□□ -0.3
CSNK2A1-203ENST00000400217 RELQ04864 619 aaPredicted RBP13.2□□□□□ -0.3
CSNK2A1-203ENST00000400217 KIAA0141Q14154 515 aaPredicted RBP13.2□□□□□ -0.3
CSNK2A1-203ENST00000400217 ZNF343Q6P1L6 599 aa13.2□□□□□ -0.3
CSNK2A1-203ENST00000400217 TEX38Q6PEX7 206 aa13.2□□□□□ -0.3
CSNK2A1-203ENST00000400217 TOMM20LQ6UXN7 152 aa13.2□□□□□ -0.3
CSNK2A1-203ENST00000400217 PPP5D1E7EU14 171 aa13.19□□□□□ -0.3
CSNK2A1-203ENST00000400217 BMPR1BO00238 502 aa13.19□□□□□ -0.3
CSNK2A1-203ENST00000400217 IGHV3-11P01762 117 aa13.19□□□□□ -0.3
CSNK2A1-203ENST00000400217 ELANEP08246 267 aa13.19□□□□□ -0.3
CSNK2A1-203ENST00000400217 ARL3P36405 182 aa13.19□□□□□ -0.3
CSNK2A1-203ENST00000400217 FOXE3Q13461 319 aa13.19□□□□□ -0.3
CSNK2A1-203ENST00000400217 FAM90A2PQ658T7 463 aa13.19□□□□□ -0.3
CSNK2A1-203ENST00000400217 C10orf99Q6UWK7 81 aa13.19□□□□□ -0.3
CSNK2A1-203ENST00000400217 OR4X2Q8NGF9 303 aa13.19□□□□□ -0.3
CSNK2A1-203ENST00000400217 ZNF418Q8TF45 676 aaPredicted RBP13.19□□□□□ -0.3
CSNK2A1-203ENST00000400217 FXYD5Q96DB9 178 aa13.19□□□□□ -0.3
CSNK2A1-203ENST00000400217 SERTAD4Q9NUC0 356 aa13.19□□□□□ -0.3
CSNK2A1-203ENST00000400217 RABAC1Q9UI14 185 aa13.19□□□□□ -0.3
CSNK2A1-203ENST00000400217 A0A1W2PRE2 83 aa13.18□□□□□ -0.3
CSNK2A1-203ENST00000400217 ZNF98A6NK75 572 aa13.18□□□□□ -0.3
CSNK2A1-203ENST00000400217 F6UZH7 168 aa13.18□□□□□ -0.3
CSNK2A1-203ENST00000400217 GP9P14770 177 aa13.18□□□□□ -0.3
CSNK2A1-203ENST00000400217 S100A7P31151 101 aa13.18□□□□□ -0.3
CSNK2A1-203ENST00000400217 ZFAND3Q9H8U3 227 aa13.18□□□□□ -0.3
CSNK2A1-203ENST00000400217 TMEM14CQ9P0S9 112 aa13.18□□□□□ -0.3
CSNK2A1-203ENST00000400217 SNAPINO95295 136 aa13.17□□□□□ -0.3
CSNK2A1-203ENST00000400217 FAM209BQ5JX69 171 aa13.17□□□□□ -0.3
CSNK2A1-203ENST00000400217 Q6ZSV7 163 aa13.17□□□□□ -0.3
CSNK2A1-203ENST00000400217 RNF24Q9Y225 148 aa13.17□□□□□ -0.3
CSNK2A1-203ENST00000400217 OTOGQ6ZRI0 2925 aa13.17□□□□□ -0.3
CSNK2A1-203ENST00000400217 TRBV12-3P01733 135 aa13.16□□□□□ -0.3
CSNK2A1-203ENST00000400217 RNASE1P07998 156 aaKnown RBP13.16□□□□□ -0.3
CSNK2A1-203ENST00000400217 NBEAP1P0C6P0 100 aa13.16□□□□□ -0.3
CSNK2A1-203ENST00000400217 RPL15P61313 204 aaKnown RBP13.16□□□□□ -0.3
CSNK2A1-203ENST00000400217 ATRAIDQ6UW56 229 aa13.16□□□□□ -0.3
CSNK2A1-203ENST00000400217 BPIFA4PQ86YQ2 179 aa13.16□□□□□ -0.3
CSNK2A1-203ENST00000400217 NKX6-2Q9C056 277 aaPredicted RBP13.16□□□□□ -0.3
CSNK2A1-203ENST00000400217 IGHV3OR16-8A0A075B7F1 116 aa13.16□□□□□ -0.3
CSNK2A1-203ENST00000400217 RPLP1P05386 114 aaKnown RBP13.16□□□□□ -0.3
CSNK2A1-203ENST00000400217 CRYBA1P05813 215 aa13.16□□□□□ -0.3
CSNK2A1-203ENST00000400217 HIST1H1EP10412 219 aaKnown RBP13.16□□□□□ -0.3
CSNK2A1-203ENST00000400217 RNF152Q8N8N0 203 aa13.16□□□□□ -0.3
CSNK2A1-203ENST00000400217 HIVEP2P31629 2446 aa13.15□□□□□ -0.3
CSNK2A1-203ENST00000400217 H3BQ15 152 aa13.15□□□□□ -0.3
CSNK2A1-203ENST00000400217 SCO1O75880 301 aa13.15□□□□□ -0.3
CSNK2A1-203ENST00000400217 NPPCP23582 126 aa13.15□□□□□ -0.3
CSNK2A1-203ENST00000400217 HILS1P60008 231 aa13.15□□□□□ -0.3
CSNK2A1-203ENST00000400217 SUMO1P63165 101 aaKnown RBP13.15□□□□□ -0.3
CSNK2A1-203ENST00000400217 FAM74A3Q4VXF1 159 aa13.15□□□□□ -0.3
CSNK2A1-203ENST00000400217 CLRN3Q8NCR9 226 aa13.15□□□□□ -0.3
CSNK2A1-203ENST00000400217 MYOZ3Q8TDC0 251 aa13.15□□□□□ -0.3
CSNK2A1-203ENST00000400217 BLNKQ8WV28 456 aa13.15□□□□□ -0.3
CSNK2A1-203ENST00000400217 RPUSD4Q96CM3 377 aaKnown RBP13.15□□□□□ -0.3
CSNK2A1-203ENST00000400217 NIPSNAP3BQ9BS92 247 aa13.15□□□□□ -0.3
CSNK2A1-203ENST00000400217 PEF1Q9UBV8 284 aaKnown RBP13.15□□□□□ -0.3
CSNK2A1-203ENST00000400217 CLPSL1A2RUU4 121 aa13.14□□□□□ -0.31
CSNK2A1-203ENST00000400217 ZNF727A8MUV8 499 aa13.14□□□□□ -0.31
CSNK2A1-203ENST00000400217 GGTLC3B5MD39 225 aa13.14□□□□□ -0.31
CSNK2A1-203ENST00000400217 NDUFA4O00483 81 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms