RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 CSRP3P50461 194 aa9.19□□□□□ -0.94
CACNA1C-217ENST00000399641 RNASE2P10153 161 aaKnown RBP9.19□□□□□ -0.94
CACNA1C-217ENST00000399641 KLRD1Q13241 179 aa9.19□□□□□ -0.94
CACNA1C-217ENST00000399641 NHLRC3Q5JS37 347 aa9.19□□□□□ -0.94
CACNA1C-217ENST00000399641 ADAMTS7Q9UKP4 1686 aa9.19□□□□□ -0.94
CACNA1C-217ENST00000399641 ZNF708P17019 499 aa9.19□□□□□ -0.94
CACNA1C-217ENST00000399641 APOC4P55056 127 aa9.19□□□□□ -0.94
CACNA1C-217ENST00000399641 PAX8Q06710 450 aa9.19□□□□□ -0.94
CACNA1C-217ENST00000399641 IRF3Q14653 427 aa9.19□□□□□ -0.94
CACNA1C-217ENST00000399641 LCN12Q6JVE5 192 aa9.19□□□□□ -0.94
CACNA1C-217ENST00000399641 LINC00587B1AMM8 73 aa9.19□□□□□ -0.94
CACNA1C-217ENST00000399641 EIF4EBP2Q13542 120 aaPredicted RBP9.19□□□□□ -0.94
CACNA1C-217ENST00000399641 DTX1Q86Y01 620 aa9.19□□□□□ -0.94
CACNA1C-217ENST00000399641 C17orf98A8MV24 154 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 ZNF138P52744 262 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 Q8TAT8 98 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 PSG8Q9UQ74 426 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 TPRP12270 2363 aaKnown RBP9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 PLA2G5P39877 138 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 ACP7Q6ZNF0 438 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 KLK9Q9UKQ9 250 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 IQCF6A8MYZ5 107 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 H0Y9J4 135 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 PROP1O75360 226 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 Q6ZQT7 251 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 EXOC3-AS1Q8N2X6 119 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 DLEC1Q9Y238 1755 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 ASXL3Q9C0F0 2248 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 A0A0J9YY99 117 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 SAA2P0DJI9 122 aaPredicted RBP9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 KIAA0040Q15053 153 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 ZNF329Q86UD4 541 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 TSSC4Q9Y5U2 329 aaPredicted RBP9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 DKK1O94907 266 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 IL18BPO95998 194 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 SLC25A47Q6Q0C1 308 aa9.18□□□□□ -0.94
CACNA1C-217ENST00000399641 ICE1Q9Y2F5 2266 aa9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 CCL3L1P16619 93 aa9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 MAP1BP46821 2468 aaKnown RBP9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 A0A0G2JNJ9 132 aa9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 IGKV1-5P01602 117 aa9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 NANOS3P60323 173 aaKnown RBP9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 Q9UFV3 132 aa9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 SCN8AQ9UQD0 1980 aa9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 CD160O95971 181 aa9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 ZNF660Q6AZW8 331 aaPredicted RBP9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 BPESC1Q9GZL8 116 aa9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 VCYO14598 125 aa9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 SLC25A38Q96DW6 304 aa9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 A0A1W2PRE2 83 aa9.17□□□□□ -0.94
CACNA1C-217ENST00000399641 ZNFX1Q9P2E3 1918 aaKnown RBP9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 IGKV1-39P01597 117 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 IGKV1D-39P04432 117 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 MSMBP08118 114 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 WIPF2Q8TF74 440 aaPredicted RBP9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 XCL2Q9UBD3 114 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 IGHV1OR15-1A0A075B7D0 117 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 TIMP3P35625 211 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 SPRR3Q9UBC9 169 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 A0A1B0GWJ7 208 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 C15orf61A6NNL5 157 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 IGF2BP2-AS1Q96M15 143 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 TMEM187Q14656 261 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 LYZL1Q6UWQ5 148 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 C9orf47Q6ZRZ4 202 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 SMIM8Q96KF7 97 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 COL18A1P39060 1754 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 STRCQ7RTU9 1775 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 CD55P08174 381 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 CELA3BP08861 270 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 MRPL55Q7Z7F7 128 aaKnown RBP9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 LINC00312Q9Y6C7 94 aa9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 DICER1Q9UPY3 1922 aaKnown RBP9.16□□□□□ -0.94
CACNA1C-217ENST00000399641 NEGR1Q7Z3B1 354 aa9.15□□□□□ -0.94
CACNA1C-217ENST00000399641 RNF125Q96EQ8 232 aa9.15□□□□□ -0.94
CACNA1C-217ENST00000399641 PLA2G1BP04054 148 aaKnown RBP9.15□□□□□ -0.94
CACNA1C-217ENST00000399641 RMI2Q96E14 147 aa9.15□□□□□ -0.94
CACNA1C-217ENST00000399641 DANCRP0C864 163 aa9.15□□□□□ -0.94
CACNA1C-217ENST00000399641 TIRAPP58753 221 aa9.15□□□□□ -0.94
CACNA1C-217ENST00000399641 TMEM133Q9H2Q1 129 aa9.15□□□□□ -0.94
CACNA1C-217ENST00000399641 IGHV4-30-2A0A087WSY4 118 aa9.15□□□□□ -0.95
CACNA1C-217ENST00000399641 IGKV3D-7A0A0C4DH55 119 aa9.15□□□□□ -0.95
CACNA1C-217ENST00000399641 GATA3P23771 443 aa9.15□□□□□ -0.95
CACNA1C-217ENST00000399641 PRSS33Q8NF86 280 aa9.15□□□□□ -0.95
CACNA1C-217ENST00000399641 ZNF319Q9P2F9 582 aa9.15□□□□□ -0.95
CACNA1C-217ENST00000399641 TDRD6O60522 2096 aaKnown RBP9.15□□□□□ -0.95
CACNA1C-217ENST00000399641 TNFSF13O75888 250 aa9.14□□□□□ -0.95
CACNA1C-217ENST00000399641 PRR30Q53SZ7 412 aaPredicted RBP9.14□□□□□ -0.95
CACNA1C-217ENST00000399641 MUSTN1Q8IVN3 82 aa9.14□□□□□ -0.95
CACNA1C-217ENST00000399641 PSG7Q13046 419 aa9.14□□□□□ -0.95
CACNA1C-217ENST00000399641 FAM90A1Q86YD7 464 aa9.14□□□□□ -0.95
CACNA1C-217ENST00000399641 CHCHD2Q9Y6H1 151 aaPredicted RBP9.14□□□□□ -0.95
CACNA1C-217ENST00000399641 KNL1Q8NG31 2342 aa9.14□□□□□ -0.95
CACNA1C-217ENST00000399641 ZNF646O15015 1829 aaPredicted RBP9.14□□□□□ -0.95
CACNA1C-217ENST00000399641 VWC2Q2TAL6 325 aa9.14□□□□□ -0.95
CACNA1C-217ENST00000399641 C5orf66Q9H5L9 145 aa9.14□□□□□ -0.95
CACNA1C-217ENST00000399641 TNS1Q9HBL0 1735 aaKnown RBP9.14□□□□□ -0.95
CACNA1C-217ENST00000399641 SH2D1AO60880 128 aa9.14□□□□□ -0.95
CACNA1C-217ENST00000399641 ANGP03950 147 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms