RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 VN1R4Q7Z5H5 301 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 NFE4Q86UQ8 179 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 TCF19Q9Y242 345 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 IGKV2D-24A0A075B6R9 120 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 CCL24O00175 119 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 HLA-DQB1P01920 261 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 SUPT4H1P63272 117 aaKnown RBP4.17□□□□□ -1.74
TTC3-204ENST00000399017 FCN3O75636 299 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 HSPB1P04792 205 aaKnown RBP4.17□□□□□ -1.74
TTC3-204ENST00000399017 IGHV1-2P23083 117 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 KLF5Q13887 457 aaPredicted RBP4.17□□□□□ -1.74
TTC3-204ENST00000399017 LINC00303Q3SY05 128 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 IGHV3-35A0A0C4DH35 117 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 HMX2A2RU54 273 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 DGCR2P98153 550 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 RPP21Q9H633 154 aaKnown RBP4.17□□□□□ -1.74
TTC3-204ENST00000399017 UMODP07911 640 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 SAA4P35542 130 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 PLA2G5P39877 138 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 ZNF562Q6V9R5 426 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 IGHV3-49A0A0A0MS15 119 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 DPM2O94777 84 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 CRYBB2P43320 205 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 MBD3L4A6NDZ8 208 aaPredicted RBP4.17□□□□□ -1.74
TTC3-204ENST00000399017 MBD3L3A6NE82 208 aaPredicted RBP4.17□□□□□ -1.74
TTC3-204ENST00000399017 MBD3L5A6NJ08 208 aaPredicted RBP4.17□□□□□ -1.74
TTC3-204ENST00000399017 C9JQL5 133 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 TMEM178BH3BS89 294 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 BUB3O43684 328 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 NTN1O95631 604 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 FUSP35637 526 aaKnown RBP eCLIP4.17□□□□□ -1.742e-6■■■■□ 19.4
TTC3-204ENST00000399017 PSG3Q16557 428 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 TMEM95Q3KNT9 176 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 MBD3L2Q8NHZ7 208 aaPredicted RBP4.17□□□□□ -1.74
TTC3-204ENST00000399017 A0A1B0GV72 72 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 UBE2D1P51668 147 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 UBE2E1P51965 193 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 TPTE2P1Q5T6R2 138 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 SLC25A47Q6Q0C1 308 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 RIMKLAQ8IXN7 391 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 LINC00518Q8N0U6 118 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 SMIM8Q96KF7 97 aa4.17□□□□□ -1.74
TTC3-204ENST00000399017 TRAF4Q9BUZ4 470 aaPredicted RBP4.17□□□□□ -1.74
TTC3-204ENST00000399017 F6UB75 175 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 ZNF138P52744 262 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 SMIM14Q96QK8 99 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 TMEM14BQ9NUH8 114 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 LRCOL1A6NCL2 159 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 FOXS1O43638 330 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 NDUFB4O95168 129 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 ANGP03950 147 aaKnown RBP4.16□□□□□ -1.74
TTC3-204ENST00000399017 TEX37Q96LM6 180 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 FANCD2OSQ96PS1 177 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 OTORQ9NRC9 128 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 RPUSD1Q9UJJ7 312 aaKnown RBP4.16□□□□□ -1.74
TTC3-204ENST00000399017 PEX11BO96011 259 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 TLN2Q9Y4G6 2542 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 NBL1P41271 181 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 A0A0G2JNJ9 132 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 SOCS3O14543 225 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 WFIKKN1Q96NZ8 548 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 Q9UFV3 132 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 IGHV2-26A0A0B4J1V2 119 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 SRRM4A7MD48 611 aaKnown RBP4.16□□□□□ -1.74
TTC3-204ENST00000399017 IGHV3-23P01764 117 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 RFPL3SP0C7P2 107 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 GAS1P54826 345 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 MRPL23Q16540 153 aaKnown RBP4.16□□□□□ -1.74
TTC3-204ENST00000399017 LIMS2Q7Z4I7 341 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 LINC00479Q96M42 142 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 C1QL1O75973 258 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 PLSCR4Q9NRQ2 329 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 IGKV1D-42A0A075B6H8 117 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 FAM236DA0A1B0GTK5 79 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 MYMXA0A1B0GTQ4 84 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 FAM236CP0DP71 79 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 TMEM249Q2WGJ8 235 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 LYPD1Q8N2G4 141 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 GLMPQ8WWB7 406 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 ANAPC13Q9BS18 74 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 FUT9Q9Y231 359 aa4.16□□□□□ -1.74
TTC3-204ENST00000399017 BCL2P10415 239 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 RCC1P18754 421 aaPredicted RBP4.15□□□□□ -1.74
TTC3-204ENST00000399017 PLEKHB2Q96CS7 222 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 Q9H3A6 140 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 A0A1W2PPV9 198 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 AZU1P20160 251 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 P2RY4P51582 365 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 IMMP2LQ96T52 175 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 ZNF506Q5JVG8 444 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 LAIR2Q6ISS4 152 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 SHISA4Q96DD7 197 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 ANKHD1Q8IWZ3 2542 aaKnown RBP4.15□□□□□ -1.74
TTC3-204ENST00000399017 LAGE3Q14657 143 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 C5orf24Q7Z6I8 188 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 LINC01551Q86U37 167 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 FGFBP3Q8TAT2 258 aa4.15□□□□□ -1.74
TTC3-204ENST00000399017 KIR2DL5BA0A0G2JN68 375 aa4.15□□□□□ -1.75
TTC3-204ENST00000399017 KIR2DL5BA0A0G2JPC4 375 aa4.15□□□□□ -1.75
TTC3-204ENST00000399017 A0A1W2PP11 408 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms