RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 OR10P1Q8NGE3 313 aa12.25□□□□□ -0.45
APTR-201ENST00000398043 C17orf77Q96MU5 243 aa12.25□□□□□ -0.45
APTR-201ENST00000398043 MARVELD1Q9BSK0 173 aa12.25□□□□□ -0.45
APTR-201ENST00000398043 SOCS3O14543 225 aa12.24□□□□□ -0.45
APTR-201ENST00000398043 GIG44P09565 113 aaPredicted RBP12.24□□□□□ -0.45
APTR-201ENST00000398043 PLP1P60201 277 aa12.24□□□□□ -0.45
APTR-201ENST00000398043 GSG1LQ6UXU4 331 aa12.24□□□□□ -0.45
APTR-201ENST00000398043 CYP2G1PQ6ZSU1 146 aa12.24□□□□□ -0.45
APTR-201ENST00000398043 NPVFQ9HCQ7 196 aa12.24□□□□□ -0.45
APTR-201ENST00000398043 LSM5Q9Y4Y9 91 aaKnown RBP12.24□□□□□ -0.45
APTR-201ENST00000398043 STARD9Q9P2P6 4700 aa12.23□□□□□ -0.45
APTR-201ENST00000398043 DEDDO75618 318 aa12.23□□□□□ -0.45
APTR-201ENST00000398043 RRAS2P62070 204 aaPredicted RBP12.23□□□□□ -0.45
APTR-201ENST00000398043 BPIFCQ8NFQ6 507 aa12.23□□□□□ -0.45
APTR-201ENST00000398043 GGACTQ9BVM4 153 aa12.23□□□□□ -0.45
APTR-201ENST00000398043 FBXL17Q9UF56 701 aa12.23□□□□□ -0.45
APTR-201ENST00000398043 PFDN2Q9UHV9 154 aa12.23□□□□□ -0.45
APTR-201ENST00000398043 SMCO3A2RU48 225 aa12.22□□□□□ -0.45
APTR-201ENST00000398043 KNCNA6PVL3 124 aa12.22□□□□□ -0.45
APTR-201ENST00000398043 INMT-MINDY4F8WBC2 141 aa12.22□□□□□ -0.45
APTR-201ENST00000398043 PRAF2O60831 178 aa12.22□□□□□ -0.45
APTR-201ENST00000398043 RAB32Q13637 225 aa12.22□□□□□ -0.45
APTR-201ENST00000398043 GPN1Q9HCN4 374 aaPredicted RBP12.22□□□□□ -0.45
APTR-201ENST00000398043 FAM24AA6NFZ4 105 aa12.21□□□□□ -0.45
APTR-201ENST00000398043 ZNF98A6NK75 572 aa12.21□□□□□ -0.45
APTR-201ENST00000398043 L7N2F9 121 aa12.21□□□□□ -0.45
APTR-201ENST00000398043 SELENOTP62341 195 aa12.21□□□□□ -0.45
APTR-201ENST00000398043 VAMP2P63027 116 aa12.21□□□□□ -0.45
APTR-201ENST00000398043 PSMG4Q5JS54 123 aa12.21□□□□□ -0.45
APTR-201ENST00000398043 STHQ8IWL8 128 aa12.21□□□□□ -0.45
APTR-201ENST00000398043 GATAD1Q8WUU5 269 aa12.21□□□□□ -0.45
APTR-201ENST00000398043 SLC25A32Q9H2D1 315 aa12.21□□□□□ -0.45
APTR-201ENST00000398043 LYRM2Q9NU23 88 aaPredicted RBP12.21□□□□□ -0.45
APTR-201ENST00000398043 H3BRN7 92 aa12.2□□□□□ -0.46
APTR-201ENST00000398043 ORM2P19652 201 aa12.2□□□□□ -0.46
APTR-201ENST00000398043 DEFA1P59665 94 aa12.2□□□□□ -0.46
APTR-201ENST00000398043 DEFA3P59666 94 aa12.2□□□□□ -0.46
APTR-201ENST00000398043 EWSR1Q01844 656 aaKnown RBP eCLIP12.2□□□□□ -0.46
APTR-201ENST00000398043 ZFAND6Q6FIF0 208 aa12.2□□□□□ -0.46
APTR-201ENST00000398043 TEPPQ6URK8 271 aa12.2□□□□□ -0.46
APTR-201ENST00000398043 OR8I2Q8N0Y5 310 aa12.2□□□□□ -0.46
APTR-201ENST00000398043 OR1B1Q8NGR6 318 aa12.2□□□□□ -0.46
APTR-201ENST00000398043 MGAT4CQ9UBM8 478 aa12.2□□□□□ -0.46
APTR-201ENST00000398043 A0A0J9YWU9 116 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 IGSF23A1L1A6 192 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 CST7O76096 145 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 SIX6O95475 246 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 LINC00869P0C866 280 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 C4BPBP20851 252 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 SNRPD3P62318 126 aaKnown RBP12.19□□□□□ -0.46
APTR-201ENST00000398043 SLC38A11Q08AI6 406 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 VWC2Q2TAL6 325 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 ACTL10Q5JWF8 245 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 PATE2Q6UY27 113 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 TMEM252Q8N6L7 170 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 PPP1R14BQ96C90 147 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 MGST2Q99735 147 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 SHANK2-AS3Q9BTD1 123 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 TMEM147Q9BVK8 224 aa12.19□□□□□ -0.46
APTR-201ENST00000398043 SLC25A39Q9BZJ4 359 aaPredicted RBP12.19□□□□□ -0.46
APTR-201ENST00000398043 H3BMM0 161 aa12.18□□□□□ -0.46
APTR-201ENST00000398043 GOSR2O14653 212 aa12.18□□□□□ -0.46
APTR-201ENST00000398043 AGPAT2O15120 278 aa12.18□□□□□ -0.46
APTR-201ENST00000398043 CA1P00915 261 aaPredicted RBP12.18□□□□□ -0.46
APTR-201ENST00000398043 SPP1P10451 314 aa12.18□□□□□ -0.46
APTR-201ENST00000398043 ATF4P18848 351 aaPredicted RBP12.18□□□□□ -0.46
APTR-201ENST00000398043 PSMB3P49720 205 aa12.18□□□□□ -0.46
APTR-201ENST00000398043 CAV2P51636 162 aa12.18□□□□□ -0.46
APTR-201ENST00000398043 S100A10P60903 97 aa12.18□□□□□ -0.46
APTR-201ENST00000398043 MORN3Q6PF18 240 aaPredicted RBP12.18□□□□□ -0.46
APTR-201ENST00000398043 CSNK1G2-AS1Q8NCQ2 148 aa12.18□□□□□ -0.46
APTR-201ENST00000398043 SCRT1Q9BWW7 348 aa12.18□□□□□ -0.46
APTR-201ENST00000398043 NMES1Q9C002 83 aa12.18□□□□□ -0.46
APTR-201ENST00000398043 DOK5Q9P104 306 aa12.18□□□□□ -0.46
APTR-201ENST00000398043 ISLRO14498 428 aa12.17□□□□□ -0.46
APTR-201ENST00000398043 HYPMO75409 117 aa12.17□□□□□ -0.46
APTR-201ENST00000398043 PVALBP20472 110 aaPredicted RBP12.17□□□□□ -0.46
APTR-201ENST00000398043 SULT1A1P50225 295 aa12.17□□□□□ -0.46
APTR-201ENST00000398043 BCAP31P51572 246 aa12.17□□□□□ -0.46
APTR-201ENST00000398043 H2BFSP57053 126 aa12.17□□□□□ -0.46
APTR-201ENST00000398043 DEFB1P60022 68 aa12.17□□□□□ -0.46
APTR-201ENST00000398043 GDF5OSQ5U4N7 250 aa12.17□□□□□ -0.46
APTR-201ENST00000398043 IL17DQ8TAD2 202 aa12.17□□□□□ -0.46
APTR-201ENST00000398043 GPR82Q96P67 336 aa12.17□□□□□ -0.46
APTR-201ENST00000398043 UHRF2Q96PU4 802 aa12.17□□□□□ -0.46
APTR-201ENST00000398043 SLC25A22Q9H936 323 aa12.17□□□□□ -0.46
APTR-201ENST00000398043 HIGD1AQ9Y241 93 aa12.17□□□□□ -0.46
APTR-201ENST00000398043 WDR83OSQ9Y284 106 aa12.17□□□□□ -0.46
APTR-201ENST00000398043 H0YIZ8 118 aa12.16□□□□□ -0.46
APTR-201ENST00000398043 HLA-DRB4P13762 266 aa12.16□□□□□ -0.46
APTR-201ENST00000398043 GALR1P47211 349 aa12.16□□□□□ -0.46
APTR-201ENST00000398043 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.16□□□□□ -0.46
APTR-201ENST00000398043 ZNF546Q86UE3 836 aa12.16□□□□□ -0.46
APTR-201ENST00000398043 TMEM217Q8N7C4 229 aa12.16□□□□□ -0.46
APTR-201ENST00000398043 C20orf173Q96LM9 149 aa12.16□□□□□ -0.46
APTR-201ENST00000398043 RARRES2Q99969 163 aa12.16□□□□□ -0.46
APTR-201ENST00000398043 SAV1Q9H4B6 383 aaPredicted RBP12.16□□□□□ -0.46
APTR-201ENST00000398043 HLA-DRB4X5D2U9 266 aa12.16□□□□□ -0.46
APTR-201ENST00000398043 MRPS12O15235 138 aaKnown RBP12.15□□□□□ -0.46
APTR-201ENST00000398043 S100A11P31949 105 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms