RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 HNF1AP20823 631 aa15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 CNN1P51911 297 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 NDPQ00604 133 aa15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 OR10G8Q8NGN5 311 aa15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 CACNG8Q8WXS5 425 aa15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 TMEM18Q96B42 140 aa15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 YTHDF2Q9Y5A9 579 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 SCO2A0A1W2PP80 73 aa15.23■□□□□ 0.03
PDLIM2-204ENST00000397760 AMY1AP04745 511 aa15.23■□□□□ 0.03
PDLIM2-204ENST00000397760 SUB1P53999 127 aaKnown RBP eCLIP15.23■□□□□ 0.03
PDLIM2-204ENST00000397760 YPEL3P61236 119 aaPredicted RBP15.23■□□□□ 0.03
PDLIM2-204ENST00000397760 TEX38Q6PEX7 206 aa15.23■□□□□ 0.03
PDLIM2-204ENST00000397760 PQLC2Q6ZP29 291 aa15.23■□□□□ 0.03
PDLIM2-204ENST00000397760 SGMS2Q8NHU3 365 aa15.23■□□□□ 0.03
PDLIM2-204ENST00000397760 PLXNB1O43157 2135 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 ZNF320A2RRD8 509 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 DEFA6Q01524 100 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 CDPF1Q6NVV7 123 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 OR5T1Q8NG75 326 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 TNFRSF19Q9NS68 423 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 TECRQ9NZ01 308 aaKnown RBP15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 ZMAT5Q9UDW3 170 aaKnown RBP15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 M0QZK8 103 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 LY6G6DO95868 133 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 TAS2R45P59539 299 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 GAMTQ14353 236 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 ZNF114Q8NC26 417 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 OCC1Q8TAD7 63 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 TMEM37Q8WXS4 190 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 RNF2Q99496 336 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 TRAPPC1Q9Y5R8 145 aa15.22■□□□□ 0.03
PDLIM2-204ENST00000397760 EGR2P11161 476 aaPredicted RBP15.21■□□□□ 0.03
PDLIM2-204ENST00000397760 GPX4P36969 197 aaPredicted RBP15.21■□□□□ 0.03
PDLIM2-204ENST00000397760 SIGLECL1Q8N7X8 197 aa15.21■□□□□ 0.03
PDLIM2-204ENST00000397760 TMEM160Q9NX00 188 aa15.21■□□□□ 0.03
PDLIM2-204ENST00000397760 HOXA3O43365 443 aaPredicted RBP15.2■□□□□ 0.02
PDLIM2-204ENST00000397760 OR5G3P0C626 314 aa15.2■□□□□ 0.02
PDLIM2-204ENST00000397760 GZMBP10144 247 aa15.2■□□□□ 0.02
PDLIM2-204ENST00000397760 C19orf35Q6ZS72 473 aa15.2■□□□□ 0.02
PDLIM2-204ENST00000397760 TMUB1Q9BVT8 246 aa15.2■□□□□ 0.02
PDLIM2-204ENST00000397760 IL36BQ9NZH7 164 aa15.2■□□□□ 0.02
PDLIM2-204ENST00000397760 OTOGQ6ZRI0 2925 aa15.2■□□□□ 0.02
PDLIM2-204ENST00000397760 ACANP16112 2415 aa15.2■□□□□ 0.02
PDLIM2-204ENST00000397760 MRPL32Q9BYC8 188 aaKnown RBP15.2■□□□□ 0.02
PDLIM2-204ENST00000397760 VPREB3Q9UKI3 123 aa15.2■□□□□ 0.02
PDLIM2-204ENST00000397760 ZFHX3Q15911 3703 aa15.19■□□□□ 0.02
PDLIM2-204ENST00000397760 LINC01548A6NM66 108 aa15.19■□□□□ 0.02
PDLIM2-204ENST00000397760 ATP6V0E1O15342 81 aa15.19■□□□□ 0.02
PDLIM2-204ENST00000397760 OR10J4P0C629 311 aa15.19■□□□□ 0.02
PDLIM2-204ENST00000397760 CD69Q07108 199 aa15.19■□□□□ 0.02
PDLIM2-204ENST00000397760 C9orf152Q5JTZ5 239 aa15.19■□□□□ 0.02
PDLIM2-204ENST00000397760 ASPHD1Q5U4P2 390 aa15.19■□□□□ 0.02
PDLIM2-204ENST00000397760 SPATA31B1PQ5VZV4 182 aa15.19■□□□□ 0.02
PDLIM2-204ENST00000397760 GBGT1Q8N5D6 347 aa15.19■□□□□ 0.02
PDLIM2-204ENST00000397760 F11RQ9Y624 299 aaKnown RBP15.19■□□□□ 0.02
PDLIM2-204ENST00000397760 FLNBO75369 2602 aaKnown RBP15.18■□□□□ 0.02
PDLIM2-204ENST00000397760 RPL19P84098 196 aaKnown RBP15.18■□□□□ 0.02
PDLIM2-204ENST00000397760 NOL4LQ96MY1 436 aaPredicted RBP15.18■□□□□ 0.02
PDLIM2-204ENST00000397760 WNT10AQ9GZT5 417 aa15.18■□□□□ 0.02
PDLIM2-204ENST00000397760 A0A1W2PRE2 83 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 FOSL1P15407 271 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 MFAP2P55001 183 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 SELENOTP62341 195 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 BLCAPP62952 87 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 PVRIGQ6DKI7 326 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 MIR17HGQ75NE6 70 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 TTC9CQ8N5M4 171 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 TLN2Q9Y4G6 2542 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 TRBV9A0A0B4J1U6 114 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 PGPEP1LA6NFU8 196 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 NPIPB5A8MRT5 1133 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 CRYGCP07315 174 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 DDTP30046 118 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 MISP3Q96FF7 219 aa15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 AURKAIP1Q9NWT8 199 aaPredicted RBP15.17■□□□□ 0.02
PDLIM2-204ENST00000397760 MLANAQ16655 118 aa15.16■□□□□ 0.02
PDLIM2-204ENST00000397760 COX19Q49B96 90 aa15.16■□□□□ 0.02
PDLIM2-204ENST00000397760 UNQ5815/PRO19632Q6UWF5 114 aa15.16■□□□□ 0.02
PDLIM2-204ENST00000397760 REC114Q7Z4M0 266 aa15.16■□□□□ 0.02
PDLIM2-204ENST00000397760 ANK3Q12955 4377 aaKnown RBP15.16■□□□□ 0.02
PDLIM2-204ENST00000397760 IGKV1OR2-108A0A075B7D4 117 aa15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 HELTA6NFD8 242 aa15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 K7EN84 100 aa15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 IGHG2P01859 326 aa15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 C8orf88P0DMB2 117 aa15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 OR10J1P30954 320 aa15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 ZNF90Q03938 601 aa15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 ECSCRQ19T08 205 aa15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 NAV3Q8IVL0 2385 aa15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 BAHCC1Q9P281 2608 aa15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 RD3LP0DJH9 198 aa15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 OR1L6Q8NGR2 347 aa15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 TMEM68Q96MH6 324 aa15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 FNDC4Q9H6D8 234 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-204ENST00000397760 CORTO00230 105 aa15.14■□□□□ 0.01
PDLIM2-204ENST00000397760 GNG4P50150 75 aa15.14■□□□□ 0.01
PDLIM2-204ENST00000397760 SCGB2A2Q13296 93 aa15.14■□□□□ 0.01
PDLIM2-204ENST00000397760 IQCJQ1A5X6 159 aa15.14■□□□□ 0.01
PDLIM2-204ENST00000397760 RPEL1Q2QD12 228 aa15.14■□□□□ 0.01
PDLIM2-204ENST00000397760 Q6ZS46 218 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms