RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 SLC25A31Q9H0C2 315 aa11.72□□□□□ -0.53
CUX2-202ENST00000397643 C21orf62Q9NYP8 219 aa11.72□□□□□ -0.53
CUX2-202ENST00000397643 MBD2Q9UBB5 411 aa11.72□□□□□ -0.53
CUX2-202ENST00000397643 TRAV14DV4A0A0A6YYC5 116 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 IGHV7-4-1A0A0J9YVY3 117 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 FAM24AA6NFZ4 105 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 CCNKO75909 580 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 CA1P00915 261 aaPredicted RBP11.71□□□□□ -0.53
CUX2-202ENST00000397643 METTL15P1P0C7V9 234 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 SLC25A4P12235 298 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 TFPI2P48307 235 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 MFAP4P55083 255 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 FAM90A2PQ658T7 463 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 OR8G2PQ6IF36 304 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 STX12Q86Y82 276 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 OR10P1Q8NGE3 313 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 RHPN1-AS1Q9BWJ2 59 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 HRH4Q9H3N8 390 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 HSPG2P98160 4391 aa11.71□□□□□ -0.53
CUX2-202ENST00000397643 C11orf94C9JXX5 98 aa11.7□□□□□ -0.54
CUX2-202ENST00000397643 CTSGP08311 255 aa11.7□□□□□ -0.54
CUX2-202ENST00000397643 NUP62P37198 522 aaPredicted RBP11.7□□□□□ -0.54
CUX2-202ENST00000397643 NPBWR1P48145 328 aa11.7□□□□□ -0.54
CUX2-202ENST00000397643 Q56UQ5 140 aa11.7□□□□□ -0.54
CUX2-202ENST00000397643 AKAP14Q86UN6 197 aa11.7□□□□□ -0.54
CUX2-202ENST00000397643 TMEM252Q8N6L7 170 aa11.7□□□□□ -0.54
CUX2-202ENST00000397643 TXN2Q99757 166 aa11.7□□□□□ -0.54
CUX2-202ENST00000397643 KRTAP4-5Q9BYR2 181 aa11.7□□□□□ -0.54
CUX2-202ENST00000397643 FNDC4Q9H6D8 234 aaPredicted RBP11.7□□□□□ -0.54
CUX2-202ENST00000397643 IGKV3-7A0A075B6H7 116 aa11.69□□□□□ -0.54
CUX2-202ENST00000397643 IGHV3-49A0A0A0MS15 119 aa11.69□□□□□ -0.54
CUX2-202ENST00000397643 IGSF23A1L1A6 192 aa11.69□□□□□ -0.54
CUX2-202ENST00000397643 RTL8CO15255 209 aa11.69□□□□□ -0.54
CUX2-202ENST00000397643 IGHV3-48P01763 117 aa11.69□□□□□ -0.54
CUX2-202ENST00000397643 RBMY1A1P0DJD3 496 aaKnown RBP11.69□□□□□ -0.54
CUX2-202ENST00000397643 RBMY1CP0DJD4 496 aa11.69□□□□□ -0.54
CUX2-202ENST00000397643 SULT1A1P50225 295 aa11.69□□□□□ -0.54
CUX2-202ENST00000397643 CMC4P56277 68 aaPredicted RBP11.69□□□□□ -0.54
CUX2-202ENST00000397643 RBMY1FQ15415 496 aaKnown RBP11.69□□□□□ -0.54
CUX2-202ENST00000397643 MLANAQ16655 118 aa11.69□□□□□ -0.54
CUX2-202ENST00000397643 Q5BKY6 102 aa11.69□□□□□ -0.54
CUX2-202ENST00000397643 UBAC2Q8NBM4 344 aa11.69□□□□□ -0.54
CUX2-202ENST00000397643 TMEM116Q8NCL8 245 aa11.69□□□□□ -0.54
CUX2-202ENST00000397643 SLC35E1Q96K37 410 aa11.69□□□□□ -0.54
CUX2-202ENST00000397643 PMS2P5A8MQ11 134 aa11.68□□□□□ -0.54
CUX2-202ENST00000397643 SCGB2A1O75556 95 aa11.68□□□□□ -0.54
CUX2-202ENST00000397643 CST7O76096 145 aa11.68□□□□□ -0.54
CUX2-202ENST00000397643 GIG44P09565 113 aaPredicted RBP11.68□□□□□ -0.54
CUX2-202ENST00000397643 RPL12P30050 165 aaKnown RBP11.68□□□□□ -0.54
CUX2-202ENST00000397643 HBG1P69891 147 aa11.68□□□□□ -0.54
CUX2-202ENST00000397643 HBG2P69892 147 aa11.68□□□□□ -0.54
CUX2-202ENST00000397643 BAXQ07812 192 aa11.68□□□□□ -0.54
CUX2-202ENST00000397643 Q6ZTC4 211 aa11.68□□□□□ -0.54
CUX2-202ENST00000397643 OR4X1Q8NH49 305 aa11.68□□□□□ -0.54
CUX2-202ENST00000397643 ACY3Q96HD9 319 aa11.68□□□□□ -0.54
CUX2-202ENST00000397643 ST6GAL2Q96JF0 529 aa11.68□□□□□ -0.54
CUX2-202ENST00000397643 GGACTQ9BVM4 153 aa11.68□□□□□ -0.54
CUX2-202ENST00000397643 IGHV4-4A0A075B6R2 117 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 FXYD6-FXYD2A0A087WZ82 144 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 IGHV4-28A0A0C4DH34 117 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 PRSS46E5RG02 174 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 SMLR1H3BR10 107 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 GNG7O60262 68 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 HLA-DMBP28068 263 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 S100A11P31949 105 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 RND2P52198 227 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 DLK1P80370 383 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 SLC38A11Q08AI6 406 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 ACOT7LQ6ZUV0 252 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 ZNF546Q86UE3 836 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 TCTE3Q8IZS6 198 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 GBGT1Q8N5D6 347 aa11.67□□□□□ -0.54
CUX2-202ENST00000397643 INO80EQ8NBZ0 244 aaPredicted RBP11.67□□□□□ -0.54
CUX2-202ENST00000397643 IGHV3OR16-13A0A075B7E8 117 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 TRAV30A0A087WSZ9 112 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 IGHV3-74A0A0B4J1X5 117 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 SMCO3A2RU48 225 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 PRSS29PA6NIE9 313 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 FNDC10F2Z333 226 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 NUPL2O15504 423 aaKnown RBP11.66□□□□□ -0.54
CUX2-202ENST00000397643 CLN5O75503 358 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 ARL16Q0P5N6 197 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 GAMTQ14353 236 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 ATP6V1FQ16864 119 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 LEMD1Q68G75 181 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 LILRB2Q8N423 598 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 FAM24BQ8N5W8 94 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 OR1S2Q8NGQ3 325 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 NPIPB3Q92617 1050 aa11.66□□□□□ -0.54
CUX2-202ENST00000397643 AGRNO00468 2067 aa11.65□□□□□ -0.54
CUX2-202ENST00000397643 G3V3Q6 166 aa11.65□□□□□ -0.54
CUX2-202ENST00000397643 NHLH2Q02577 135 aa11.65□□□□□ -0.54
CUX2-202ENST00000397643 AKR1C1Q04828 323 aa11.65□□□□□ -0.54
CUX2-202ENST00000397643 RELQ04864 619 aaPredicted RBP11.65□□□□□ -0.54
CUX2-202ENST00000397643 MRPL36Q9P0J6 103 aaKnown RBP11.65□□□□□ -0.54
CUX2-202ENST00000397643 HSPB11Q9Y547 144 aa11.65□□□□□ -0.54
CUX2-202ENST00000397643 TRAV10A0A0B4J240 114 aa11.64□□□□□ -0.55
CUX2-202ENST00000397643 ZNF705EA8MWA4 302 aaPredicted RBP11.64□□□□□ -0.55
CUX2-202ENST00000397643 AMBPP02760 352 aa11.64□□□□□ -0.55
CUX2-202ENST00000397643 OR10J1P30954 320 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms