RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SRSF2Q01130 221 aaKnown RBP11.66□□□□□ -0.54
CAPN3-207ENST00000397200 ZNF90Q03938 601 aa11.66□□□□□ -0.54
CAPN3-207ENST00000397200 PATE2Q6UY27 113 aa11.66□□□□□ -0.54
CAPN3-207ENST00000397200 Q6ZSV7 163 aa11.66□□□□□ -0.54
CAPN3-207ENST00000397200 ZFP82Q8N141 532 aa11.66□□□□□ -0.54
CAPN3-207ENST00000397200 SGMS2Q8NHU3 365 aa11.66□□□□□ -0.54
CAPN3-207ENST00000397200 DERL1Q9BUN8 251 aa11.66□□□□□ -0.54
CAPN3-207ENST00000397200 SLC25A2Q9BXI2 301 aa11.66□□□□□ -0.54
CAPN3-207ENST00000397200 TRBV20OR9-2A0A075B6H5 130 aa11.65□□□□□ -0.54
CAPN3-207ENST00000397200 C9JCJ5 164 aa11.65□□□□□ -0.54
CAPN3-207ENST00000397200 AP4M1O00189 453 aa11.65□□□□□ -0.54
CAPN3-207ENST00000397200 TGOLN2O43493 480 aa11.65□□□□□ -0.54
CAPN3-207ENST00000397200 PFN1P07737 140 aaKnown RBP11.65□□□□□ -0.54
CAPN3-207ENST00000397200 APELAP0DMC3 54 aa11.65□□□□□ -0.54
CAPN3-207ENST00000397200 EGR2P11161 476 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-207ENST00000397200 PLP1P60201 277 aa11.65□□□□□ -0.54
CAPN3-207ENST00000397200 KIAA0141Q14154 515 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-207ENST00000397200 ECSCRQ19T08 205 aa11.65□□□□□ -0.54
CAPN3-207ENST00000397200 C19orf35Q6ZS72 473 aa11.65□□□□□ -0.54
CAPN3-207ENST00000397200 Q8N2B8 174 aa11.65□□□□□ -0.54
CAPN3-207ENST00000397200 C2CD4CQ8TF44 421 aa11.65□□□□□ -0.54
CAPN3-207ENST00000397200 MISP3Q96FF7 219 aa11.65□□□□□ -0.54
CAPN3-207ENST00000397200 LY96Q9Y6Y9 160 aa11.65□□□□□ -0.54
CAPN3-207ENST00000397200 A0A1W2PRE2 83 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 C5orf52A6NGY3 159 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 I3L2K1 104 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 COX7A2P2O60397 106 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 IGF1P05019 195 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 TMEM95Q3KNT9 176 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 MORN5Q5VZ52 161 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 OR1L6Q8NGR2 347 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 UHRF2Q96PU4 802 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 SAV1Q9H4B6 383 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-207ENST00000397200 LINC00527Q9UJ94 153 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 URGCP-MRPS24S4R325 110 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 ELOA3CA0A087WX78 387 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-207ENST00000397200 H7BYZ3 331 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 OR7C2O60412 319 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 IGHV3-48P01763 117 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 CRIP2P52943 208 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-207ENST00000397200 C10orf113Q5VZT2 155 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 UNQ5815/PRO19632Q6UWF5 114 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 OR4X1Q8NH49 305 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 TMEM68Q96MH6 324 aa11.64□□□□□ -0.55
CAPN3-207ENST00000397200 NOL4LQ96MY1 436 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-207ENST00000397200 TRAV41A0A0B4J266 112 aa11.63□□□□□ -0.55
CAPN3-207ENST00000397200 GGTLC3B5MD39 225 aa11.63□□□□□ -0.55
CAPN3-207ENST00000397200 RPS10P46783 165 aaKnown RBP11.63□□□□□ -0.55
CAPN3-207ENST00000397200 ASPHD1Q5U4P2 390 aa11.63□□□□□ -0.55
CAPN3-207ENST00000397200 FAM210BQ96KR6 192 aa11.63□□□□□ -0.55
CAPN3-207ENST00000397200 ZNF355PQ9NSJ1 428 aa11.63□□□□□ -0.55
CAPN3-207ENST00000397200 ZNF580Q9UK33 172 aa11.63□□□□□ -0.55
CAPN3-207ENST00000397200 NF1P21359 2839 aa11.62□□□□□ -0.55
CAPN3-207ENST00000397200 NPIPB5A8MRT5 1133 aa11.62□□□□□ -0.55
CAPN3-207ENST00000397200 G3V318 75 aa11.62□□□□□ -0.55
CAPN3-207ENST00000397200 UBE2CO00762 179 aa11.62□□□□□ -0.55
CAPN3-207ENST00000397200 NDUFA7O95182 113 aa11.62□□□□□ -0.55
CAPN3-207ENST00000397200 OR5AU1Q8NGC0 362 aa11.62□□□□□ -0.55
CAPN3-207ENST00000397200 C16orf95Q9H693 158 aa11.62□□□□□ -0.55
CAPN3-207ENST00000397200 TRAV5A0A0B4J249 113 aa11.61□□□□□ -0.55
CAPN3-207ENST00000397200 K7EIM0 57 aa11.61□□□□□ -0.55
CAPN3-207ENST00000397200 PHOX2AO14813 284 aa11.61□□□□□ -0.55
CAPN3-207ENST00000397200 PPP1R2P9O14990 202 aa11.61□□□□□ -0.55
CAPN3-207ENST00000397200 IGLC1P0CG04 106 aa11.61□□□□□ -0.55
CAPN3-207ENST00000397200 GALR1P47211 349 aa11.61□□□□□ -0.55
CAPN3-207ENST00000397200 UBE2L3P68036 154 aaKnown RBP11.61□□□□□ -0.55
CAPN3-207ENST00000397200 TTC9CQ8N5M4 171 aa11.61□□□□□ -0.55
CAPN3-207ENST00000397200 IMMP2LQ96T52 175 aa11.61□□□□□ -0.55
CAPN3-207ENST00000397200 WNT10AQ9GZT5 417 aa11.61□□□□□ -0.55
CAPN3-207ENST00000397200 GGCTO75223 188 aaKnown RBP11.6□□□□□ -0.55
CAPN3-207ENST00000397200 C19orf54Q5BKX5 351 aa11.6□□□□□ -0.55
CAPN3-207ENST00000397200 STXBP6Q8NFX7 210 aa11.6□□□□□ -0.55
CAPN3-207ENST00000397200 OR5T1Q8NG75 326 aa11.6□□□□□ -0.55
CAPN3-207ENST00000397200 FAM110DQ8TAY7 271 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-207ENST00000397200 FXYD5Q96DB9 178 aa11.6□□□□□ -0.55
CAPN3-207ENST00000397200 OR5B12Q96R08 314 aa11.6□□□□□ -0.55
CAPN3-207ENST00000397200 SERTAD4Q9NUC0 356 aa11.6□□□□□ -0.55
CAPN3-207ENST00000397200 JMJD1CQ15652 2540 aa11.6□□□□□ -0.55
CAPN3-207ENST00000397200 OR10J4P0C629 311 aa11.6□□□□□ -0.55
CAPN3-207ENST00000397200 S100PP25815 95 aa11.6□□□□□ -0.55
CAPN3-207ENST00000397200 RPL35P42766 123 aaKnown RBP11.6□□□□□ -0.55
CAPN3-207ENST00000397200 LINC01006Q8NI28 216 aa11.6□□□□□ -0.55
CAPN3-207ENST00000397200 TCEAL7Q9BRU2 100 aa11.6□□□□□ -0.55
CAPN3-207ENST00000397200 PAXXQ9BUH6 204 aa11.6□□□□□ -0.55
CAPN3-207ENST00000397200 PGPEP1LA6NFU8 196 aa11.59□□□□□ -0.55
CAPN3-207ENST00000397200 TYMSP04818 313 aa11.59□□□□□ -0.55
CAPN3-207ENST00000397200 PPIFP30405 207 aaKnown RBP11.59□□□□□ -0.55
CAPN3-207ENST00000397200 SNRPEP62304 92 aaKnown RBP11.59□□□□□ -0.55
CAPN3-207ENST00000397200 SLC35B1P78383 322 aa11.59□□□□□ -0.55
CAPN3-207ENST00000397200 LINC00305Q7Z4B0 112 aa11.59□□□□□ -0.55
CAPN3-207ENST00000397200 OCC1Q8TAD7 63 aa11.59□□□□□ -0.55
CAPN3-207ENST00000397200 SFRP2Q96HF1 295 aa11.59□□□□□ -0.55
CAPN3-207ENST00000397200 ELOVL1Q9BW60 279 aa11.59□□□□□ -0.55
CAPN3-207ENST00000397200 OR51M1Q9H341 326 aa11.59□□□□□ -0.55
CAPN3-207ENST00000397200 SRD5A3Q9H8P0 318 aa11.59□□□□□ -0.55
CAPN3-207ENST00000397200 C2CD3Q4AC94 2353 aa11.58□□□□□ -0.56
CAPN3-207ENST00000397200 IGLV11-55A0A075B6I3 123 aa11.58□□□□□ -0.56
CAPN3-207ENST00000397200 HYPMO75409 117 aa11.58□□□□□ -0.56
CAPN3-207ENST00000397200 S100A6P06703 90 aa11.58□□□□□ -0.56
CAPN3-207ENST00000397200 PYYP10082 97 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms