RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 MTURNQ8N3F0 131 aa7.4□□□□□ -1.23
CAPN3-206ENST00000397163 OR2K2Q8NGT1 345 aa7.4□□□□□ -1.23
CAPN3-206ENST00000397163 CCL13Q99616 98 aa7.4□□□□□ -1.23
CAPN3-206ENST00000397163 SPCS1Q9Y6A9 102 aa7.4□□□□□ -1.23
CAPN3-206ENST00000397163 TANC2Q9HCD6 1990 aa7.4□□□□□ -1.23
CAPN3-206ENST00000397163 P01737 135 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 KIR3DS1Q14943 382 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 CHCHD1Q96BP2 118 aaKnown RBP7.39□□□□□ -1.23
CAPN3-206ENST00000397163 DAZAP1Q96EP5 407 aaKnown RBP7.39□□□□□ -1.23
CAPN3-206ENST00000397163 GPR82Q96P67 336 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 NDUFA4L2Q9NRX3 87 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 TSSC4Q9Y5U2 329 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-206ENST00000397163 TRAV26-1A0A087WT03 109 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.39□□□□□ -1.23
CAPN3-206ENST00000397163 TCRBV4S1A1TA0A5B7 111 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 K7EP34 96 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 M0R1B8 84 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 CHEK1O14757 476 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 NCR2O95944 276 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 MOSP00540 346 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 REG1BP48304 166 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 TMEM177Q53S58 311 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 C10orf55Q5SWW7 151 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 SLC25A48Q6ZT89 311 aaKnown RBP7.39□□□□□ -1.23
CAPN3-206ENST00000397163 FAM216BQ8N7L0 139 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 MRPL20Q9BYC9 149 aaKnown RBP7.39□□□□□ -1.23
CAPN3-206ENST00000397163 C7orf69Q9H7B7 122 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 F11RQ9Y624 299 aaKnown RBP7.39□□□□□ -1.23
CAPN3-206ENST00000397163 E7EUB6 86 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 CRXO43186 299 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-206ENST00000397163 LHBP01229 141 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 GUSBP1Q15486 140 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 MAP1LC3CQ9BXW4 147 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 NPFFR1Q9GZQ6 430 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 SSUH2Q9Y2M2 353 aa7.39□□□□□ -1.23
CAPN3-206ENST00000397163 H3BTX0 84 aa7.38□□□□□ -1.23
CAPN3-206ENST00000397163 LINC00322Q6ZN03 302 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-206ENST00000397163 GTSF1Q8WW33 167 aa7.38□□□□□ -1.23
CAPN3-206ENST00000397163 RNF7Q9UBF6 113 aa7.38□□□□□ -1.23
CAPN3-206ENST00000397163 RABAC1Q9UI14 185 aa7.38□□□□□ -1.23
CAPN3-206ENST00000397163 RPUSD1Q9UJJ7 312 aaKnown RBP7.38□□□□□ -1.23
CAPN3-206ENST00000397163 PROCRQ9UNN8 238 aa7.38□□□□□ -1.23
CAPN3-206ENST00000397163 C9orf118A6NHY6 69 aa7.38□□□□□ -1.23
CAPN3-206ENST00000397163 PCNX2A6NKB5 2137 aa7.38□□□□□ -1.23
CAPN3-206ENST00000397163 SUB1P53999 127 aaKnown RBP eCLIP7.38□□□□□ -1.23
CAPN3-206ENST00000397163 FXYD7P58549 80 aa7.38□□□□□ -1.23
CAPN3-206ENST00000397163 NEGR1Q7Z3B1 354 aa7.38□□□□□ -1.23
CAPN3-206ENST00000397163 OSR1Q8TAX0 266 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-206ENST00000397163 C1RLQ9NZP8 487 aa7.38□□□□□ -1.23
CAPN3-206ENST00000397163 JKAMPQ9P055 326 aa7.38□□□□□ -1.23
CAPN3-206ENST00000397163 A0A1B0GV72 72 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 LIPFP07098 398 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 WT1-ASQ06250 92 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 SCGB2A2Q13296 93 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 STXBP6Q8NFX7 210 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 FLYWCH2Q96CP2 140 aaKnown RBP7.37□□□□□ -1.23
CAPN3-206ENST00000397163 ATP6V0BQ99437 205 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 MRPL36Q9P0J6 103 aaKnown RBP7.37□□□□□ -1.23
CAPN3-206ENST00000397163 IGKV1D-37A0A075B6S9 117 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 NDUFS8O00217 210 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 GAFA1Q96PS6 74 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 ZNF71Q9NQZ8 489 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-206ENST00000397163 SOX21Q9Y651 276 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-206ENST00000397163 GVINP1Q7Z2Y8 2422 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 CDX4O14627 284 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-206ENST00000397163 IGHG3P01860 377 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 HLA-DRB1P01911 266 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 MYCNOSP40205 109 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 CRYBA4P53673 196 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 TNFAIP6P98066 277 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-206ENST00000397163 PET117Q6UWS5 81 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 RBPMS2Q6ZRY4 209 aaKnown RBP7.37□□□□□ -1.23
CAPN3-206ENST00000397163 ASCL5Q7RTU5 278 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 NEU4Q8WWR8 484 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-206ENST00000397163 SIGMAR1Q99720 223 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 HSPB8Q9UJY1 196 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 SLC25A15Q9Y619 301 aa7.37□□□□□ -1.23
CAPN3-206ENST00000397163 hADV38S2A0JD32 116 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-206ENST00000397163 OR5AL1P0C617 328 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 COL8A1P27658 744 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 CCL11P51671 97 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 CKS1BP61024 79 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 DHRS13Q6UX07 377 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 MLST8Q9BVC4 326 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 TMUB1Q9BVT8 246 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 PLSCR4Q9NRQ2 329 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 CNOT1A5YKK6 2376 aaKnown RBP7.36□□□□□ -1.23
CAPN3-206ENST00000397163 DSCAMO60469 2012 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 K7ERJ3 54 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 FSTL3O95633 263 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 ZNF833PQ6ZTB9 187 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 OR8A1Q8NGG7 326 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 PRSS22Q9GZN4 317 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 KLF12Q9Y4X4 402 aa7.36□□□□□ -1.23
CAPN3-206ENST00000397163 TM4SF5O14894 197 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 COX8AP10176 69 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 GLRXP35754 106 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 HSD52Q0P140 79 aa7.35□□□□□ -1.23
CAPN3-206ENST00000397163 CT83Q5H943 113 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms