RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 NPVFQ9HCQ7 196 aa10.23□□□□□ -0.77
SEC13-204ENST00000397099 NUDT15Q9NV35 164 aa10.23□□□□□ -0.77
SEC13-204ENST00000397099 H3BP45 60 aa10.22□□□□□ -0.77
SEC13-204ENST00000397099 H2AFB2P0C5Z0 115 aa10.22□□□□□ -0.77
SEC13-204ENST00000397099 GALR1P47211 349 aa10.22□□□□□ -0.77
SEC13-204ENST00000397099 PSMB3P49720 205 aa10.22□□□□□ -0.77
SEC13-204ENST00000397099 DLK1P80370 383 aa10.22□□□□□ -0.77
SEC13-204ENST00000397099 ASAH1Q13510 395 aa10.22□□□□□ -0.77
SEC13-204ENST00000397099 PSMG4Q5JS54 123 aa10.22□□□□□ -0.77
SEC13-204ENST00000397099 TMEM14EPQ6UXP3 125 aa10.22□□□□□ -0.77
SEC13-204ENST00000397099 ACOT7LQ6ZUV0 252 aa10.22□□□□□ -0.77
SEC13-204ENST00000397099 OR11H2Q8NH07 326 aa10.22□□□□□ -0.77
SEC13-204ENST00000397099 MFFQ9GZY8 342 aa10.22□□□□□ -0.77
SEC13-204ENST00000397099 GSKIPQ9P0R6 139 aa10.22□□□□□ -0.77
SEC13-204ENST00000397099 MGAT4CQ9UBM8 478 aa10.22□□□□□ -0.77
SEC13-204ENST00000397099 ISLRO14498 428 aa10.21□□□□□ -0.77
SEC13-204ENST00000397099 SCGB1D2O95969 90 aa10.21□□□□□ -0.77
SEC13-204ENST00000397099 OR2F1Q13607 317 aa10.21□□□□□ -0.77
SEC13-204ENST00000397099 ACTL10Q5JWF8 245 aa10.21□□□□□ -0.77
SEC13-204ENST00000397099 OR1B1Q8NGR6 318 aa10.21□□□□□ -0.77
SEC13-204ENST00000397099 TMEM147Q9BVK8 224 aa10.21□□□□□ -0.77
SEC13-204ENST00000397099 PTTG2Q9NZH5 202 aa10.21□□□□□ -0.77
SEC13-204ENST00000397099 KLK5Q9Y337 293 aaPredicted RBP10.21□□□□□ -0.77
SEC13-204ENST00000397099 TRAV6A0A075B6T7 132 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 SMCO3A2RU48 225 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 CXorf65A6NEN9 183 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 A6NHS1 94 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 K7EPK0 472 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 L7N2F9 121 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 AGRNO00468 2067 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 IL5P05113 134 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 PVALBP20472 110 aaPredicted RBP10.2□□□□□ -0.78
SEC13-204ENST00000397099 PLP1P60201 277 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 RAP2BP61225 183 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 VAMP2P63027 116 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 PXDC1Q5TGL8 231 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 TEPPQ6URK8 271 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 C12orf45Q8N5I9 185 aaPredicted RBP10.2□□□□□ -0.78
SEC13-204ENST00000397099 CLUHP3Q96NS8 147 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 BATF3Q9NR55 127 aa10.2□□□□□ -0.78
SEC13-204ENST00000397099 C5orf51A6NDU8 294 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 ZNF98A6NK75 572 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 PMS2P5A8MQ11 134 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 DEDDO75618 318 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 MBPP02686 304 aaPredicted RBP10.19□□□□□ -0.78
SEC13-204ENST00000397099 METTL15P1P0C7V9 234 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 HLA-DRB4P13762 266 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 MIFP14174 115 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 PAX9P55771 341 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 PMS2P11Q13670 270 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 FOXI2Q6ZQN5 318 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 CYP2G1PQ6ZSU1 146 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 GPN1Q9HCN4 374 aaPredicted RBP10.19□□□□□ -0.78
SEC13-204ENST00000397099 RCL1Q9Y2P8 373 aaKnown RBP10.19□□□□□ -0.78
SEC13-204ENST00000397099 HLA-DRB4X5D2U9 266 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 DNAH1Q9P2D7 4330 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 RYR2Q92736 4967 aa10.19□□□□□ -0.78
SEC13-204ENST00000397099 PLECQ15149 4684 aaKnown RBP10.18□□□□□ -0.78
SEC13-204ENST00000397099 C7orf66A4D0T2 115 aa10.18□□□□□ -0.78
SEC13-204ENST00000397099 KNCNA6PVL3 124 aa10.18□□□□□ -0.78
SEC13-204ENST00000397099 FAM25EA8MYX2 175 aa10.18□□□□□ -0.78
SEC13-204ENST00000397099 H3BMM0 161 aa10.18□□□□□ -0.78
SEC13-204ENST00000397099 HYPMO75409 117 aa10.18□□□□□ -0.78
SEC13-204ENST00000397099 UPK1BO75841 260 aa10.18□□□□□ -0.78
SEC13-204ENST00000397099 RPL7P18124 248 aaKnown RBP10.18□□□□□ -0.78
SEC13-204ENST00000397099 ORM2P19652 201 aa10.18□□□□□ -0.78
SEC13-204ENST00000397099 RAB31Q13636 194 aa10.18□□□□□ -0.78
SEC13-204ENST00000397099 CEMP1Q6PRD7 247 aaPredicted RBP10.18□□□□□ -0.78
SEC13-204ENST00000397099 GSG1LQ6UXU4 331 aa10.18□□□□□ -0.78
SEC13-204ENST00000397099 ZNF546Q86UE3 836 aa10.18□□□□□ -0.78
SEC13-204ENST00000397099 ENKURQ8TC29 256 aa10.18□□□□□ -0.78
SEC13-204ENST00000397099 C2orf50Q96LR7 162 aa10.18□□□□□ -0.78
SEC13-204ENST00000397099 RPRMQ9NS64 109 aa10.18□□□□□ -0.78
SEC13-204ENST00000397099 ZNF705EA8MWA4 302 aaPredicted RBP10.17□□□□□ -0.78
SEC13-204ENST00000397099 PRAF2O60831 178 aa10.17□□□□□ -0.78
SEC13-204ENST00000397099 EBLN2Q6P2I7 272 aa10.17□□□□□ -0.78
SEC13-204ENST00000397099 LINC00052Q96N35 136 aa10.17□□□□□ -0.78
SEC13-204ENST00000397099 HRH4Q9H3N8 390 aa10.17□□□□□ -0.78
SEC13-204ENST00000397099 SAV1Q9H4B6 383 aaPredicted RBP10.17□□□□□ -0.78
SEC13-204ENST00000397099 TBC1D24Q9ULP9 559 aa10.17□□□□□ -0.78
SEC13-204ENST00000397099 HIGD1AQ9Y241 93 aa10.17□□□□□ -0.78
SEC13-204ENST00000397099 SOCS3O14543 225 aa10.16□□□□□ -0.78
SEC13-204ENST00000397099 GOSR2O14653 212 aa10.16□□□□□ -0.78
SEC13-204ENST00000397099 LINC00869P0C866 280 aa10.16□□□□□ -0.78
SEC13-204ENST00000397099 DEFA1P59665 94 aa10.16□□□□□ -0.78
SEC13-204ENST00000397099 DEFA3P59666 94 aa10.16□□□□□ -0.78
SEC13-204ENST00000397099 RRAS2P62070 204 aaPredicted RBP10.16□□□□□ -0.78
SEC13-204ENST00000397099 C11orf45Q8TAV5 145 aa10.16□□□□□ -0.78
SEC13-204ENST00000397099 C16orf92Q96LL3 132 aa10.16□□□□□ -0.78
SEC13-204ENST00000397099 SEC22CQ9BRL7 303 aa10.16□□□□□ -0.78
SEC13-204ENST00000397099 SLC25A39Q9BZJ4 359 aaPredicted RBP10.16□□□□□ -0.78
SEC13-204ENST00000397099 SLC25A22Q9H936 323 aa10.16□□□□□ -0.78
SEC13-204ENST00000397099 ALMS1Q8TCU4 4167 aa10.15□□□□□ -0.78
SEC13-204ENST00000397099 ELOA3CA0A087WX78 387 aaPredicted RBP10.15□□□□□ -0.78
SEC13-204ENST00000397099 H3BRN7 92 aa10.15□□□□□ -0.78
SEC13-204ENST00000397099 CCSO14618 274 aa10.15□□□□□ -0.78
SEC13-204ENST00000397099 GIG44P09565 113 aaPredicted RBP10.15□□□□□ -0.78
SEC13-204ENST00000397099 S100A11P31949 105 aa10.15□□□□□ -0.78
SEC13-204ENST00000397099 BCAP31P51572 246 aa10.15□□□□□ -0.78
SEC13-204ENST00000397099 TCTAP57738 103 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms