RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 RASL11AQ6T310 242 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 TMEM52Q8NDY8 209 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 FAM168AQ92567 244 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 TRAV13-1A0A0B4J241 112 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 IFI6P09912 130 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 BSPH1Q075Z2 132 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 TRAV14DV4A0A0A6YYC5 116 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 ZNF474Q6S9Z5 364 aaPredicted RBP8.63□□□□□ -1.03
COL4A4-201ENST00000396625 FOXD3Q9UJU5 478 aaPredicted RBP8.63□□□□□ -1.03
COL4A4-201ENST00000396625 PYYP10082 97 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 ZNF525Q8N782 197 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 GAGE1Q13065 139 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 DSCR8Q96T75 97 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 DEPPQ9NTK1 212 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 CEACAM1P13688 526 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 C1orf194Q5T5A4 169 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 RPP25Q9BUL9 199 aaKnown RBP8.62□□□□□ -1.03
COL4A4-201ENST00000396625 C1orf43Q9BWL3 253 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 LSM4Q9Y4Z0 139 aaKnown RBP8.62□□□□□ -1.03
COL4A4-201ENST00000396625 C18orf12Q96KH6 178 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 TMEM126AQ9H061 195 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 EFEMP2O95967 443 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 TEX38Q6PEX7 206 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 TRBV20-1A0A075B6N2 111 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 NPIPB5A8MRT5 1133 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 RHOGP84095 191 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 ZNF106Q9H2Y7 1883 aaKnown RBP8.62□□□□□ -1.03
COL4A4-201ENST00000396625 MPV17L2Q567V2 206 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 TMEM14DPA8MWL7 114 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 UCP1P25874 307 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 C6orf226Q5I0X4 101 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 COLCA1Q6ZS62 124 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 WFDC12Q8WWY7 111 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 IGKV2-40A0A087WW87 121 aaPredicted RBP8.62□□□□□ -1.03
COL4A4-201ENST00000396625 SPAARA0A1B0GVQ0 90 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 GAGE12JA6NER3 117 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 C12orf77C9JDV5 145 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 IGKV2D-40P01614 121 aaPredicted RBP8.62□□□□□ -1.03
COL4A4-201ENST00000396625 RBM3P98179 157 aaKnown RBP8.62□□□□□ -1.03
COL4A4-201ENST00000396625 GAGE4Q13068 117 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 GAGE5Q13069 117 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 GAGE6Q13070 117 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 LTBP4Q8N2S1 1624 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 LILRA1O75019 489 aa8.62□□□□□ -1.03
COL4A4-201ENST00000396625 IGHG3P01860 377 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 SPSB2Q99619 263 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 UBL5Q9BZL1 73 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 IQCF6A8MYZ5 107 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 COX5BP10606 129 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 ZNF362Q5T0B9 420 aaPredicted RBP8.61□□□□□ -1.03
COL4A4-201ENST00000396625 RPRMLQ8N4K4 120 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 RCHY1Q96PM5 261 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 SYS1-DBNDD2H3BUS1 97 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 PCOLCEQ15113 449 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 DEFB104AQ8WTQ1 72 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 EFNB3Q15768 340 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 LIMS2Q7Z4I7 341 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 DUSP15Q9H1R2 295 aaPredicted RBP8.61□□□□□ -1.03
COL4A4-201ENST00000396625 TRGV1A0A0A0MS02 117 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 FOXS1O43638 330 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 NDUFS5O43920 106 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 FXYD7P58549 80 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 C9orf50Q5SZB4 431 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 OCC1Q8TAD7 63 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 TM2D1Q9BX74 207 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 Q6ZT83 130 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 CD55P08174 381 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 FOXL2P58012 376 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 FGF11Q92914 225 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 C1orf159Q96HA4 380 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 SLC25A39Q9BZJ4 359 aaPredicted RBP8.61□□□□□ -1.03
COL4A4-201ENST00000396625 CSTL1Q9H114 145 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 PSG8Q9UQ74 426 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 LINC00312Q9Y6C7 94 aa8.61□□□□□ -1.03
COL4A4-201ENST00000396625 SVIPQ8NHG7 77 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 PPDPFLQ8WWR9 84 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 TCF15Q12870 199 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 FAM208BQ5VWN6 2430 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 APOBEC3AP31941 199 aaPredicted RBP8.6□□□□□ -1.03
COL4A4-201ENST00000396625 TRAV12-1A0A0B4J245 112 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 NDUFS6O75380 124 aaKnown RBP8.6□□□□□ -1.03
COL4A4-201ENST00000396625 C3orf36Q3SXR2 165 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 BHLHA9Q7RTU4 235 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 FAM181AQ8N9Y4 354 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 THAP8Q8NA92 274 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 PRIMA1Q86XR5 153 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 ADAMTS9Q9P2N4 1935 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 SS18Q15532 418 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 IGKV1-8A0A0C4DH67 115 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 PRB4P10163 310 aaPredicted RBP8.6□□□□□ -1.03
COL4A4-201ENST00000396625 LCN12Q6JVE5 192 aa8.6□□□□□ -1.03
COL4A4-201ENST00000396625 OVOL1O14753 267 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 NDUFC2O95298 119 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 NKAPP1Q8N9T2 125 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 ATP6V0BQ99437 205 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 C8orf46Q8TAG6 207 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 WFDC6Q9BQY6 131 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 TECTAO75443 2155 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 SP9P0CG40 484 aa8.59□□□□□ -1.03
COL4A4-201ENST00000396625 LTBRP36941 435 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms