RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 GAGE2AQ6NT46 116 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 LINC00114Q6XXX2 140 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 A0A087WX48 190 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 NCR2O95944 276 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 SLC25A39Q9BZJ4 359 aaPredicted RBP11.58□□□□□ -0.56
COL4A3-202ENST00000396578 OR10W1Q8NGF6 305 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 RCHY1Q96PM5 261 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 TRIOBPQ9H2D6 2365 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 TRAV1-1A0A0B4J248 108 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 PMS2P5A8MQ11 134 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 SRSF7Q16629 238 aaKnown RBP eCLIP11.58□□□□□ -0.56
COL4A3-202ENST00000396578 TRAV8-3A0A0A6YYJ7 113 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 A0A0G2JMM0 328 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 A0A1W2PPB8 328 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 KIR3DP1A8MWS1 328 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 NCOR1O75376 2440 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 INS-IGF2F8WCM5 200 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 INSP01308 110 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 ERCC8Q13216 396 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 LHFPL4Q7Z7J7 247 aa11.58□□□□□ -0.56
COL4A3-202ENST00000396578 ID3Q02535 119 aa11.57□□□□□ -0.56
COL4A3-202ENST00000396578 NUP35Q8NFH5 326 aa11.57□□□□□ -0.56
COL4A3-202ENST00000396578 FBLN5Q9UBX5 448 aa11.57□□□□□ -0.56
COL4A3-202ENST00000396578 VCYO14598 125 aa11.57□□□□□ -0.56
COL4A3-202ENST00000396578 PSG1P11464 419 aa11.57□□□□□ -0.56
COL4A3-202ENST00000396578 EXOC3-AS1Q8N2X6 119 aa11.57□□□□□ -0.56
COL4A3-202ENST00000396578 MBNL3Q9NUK0 354 aaKnown RBP11.57□□□□□ -0.56
COL4A3-202ENST00000396578 ZNF319Q9P2F9 582 aa11.57□□□□□ -0.56
COL4A3-202ENST00000396578 SYS1-DBNDD2H3BUS1 97 aa11.57□□□□□ -0.56
COL4A3-202ENST00000396578 RPL32P62910 135 aaKnown RBP11.57□□□□□ -0.56
COL4A3-202ENST00000396578 WBP1Q96G27 269 aa11.57□□□□□ -0.56
COL4A3-202ENST00000396578 FAM166AQ6J272 317 aa11.57□□□□□ -0.56
COL4A3-202ENST00000396578 AGMATQ9BSE5 352 aa11.57□□□□□ -0.56
COL4A3-202ENST00000396578 GGTLC1Q9BX51 225 aa11.57□□□□□ -0.56
COL4A3-202ENST00000396578 H0YIZ8 118 aa11.56□□□□□ -0.56
COL4A3-202ENST00000396578 HOXD3P31249 432 aaPredicted RBP11.56□□□□□ -0.56
COL4A3-202ENST00000396578 PRB3Q04118 309 aaPredicted RBP11.56□□□□□ -0.56
COL4A3-202ENST00000396578 TREML4Q6UXN2 200 aa11.56□□□□□ -0.56
COL4A3-202ENST00000396578 WFDC12Q8WWY7 111 aa11.56□□□□□ -0.56
COL4A3-202ENST00000396578 RSPO3Q9BXY4 272 aaPredicted RBP11.56□□□□□ -0.56
COL4A3-202ENST00000396578 GREM1O60565 184 aa11.56□□□□□ -0.56
COL4A3-202ENST00000396578 CACNA1BQ00975 2339 aa11.56□□□□□ -0.56
COL4A3-202ENST00000396578 CNOT1A5YKK6 2376 aaKnown RBP11.56□□□□□ -0.56
COL4A3-202ENST00000396578 CD24P25063 80 aa11.56□□□□□ -0.56
COL4A3-202ENST00000396578 C9orf153Q5TBE3 101 aa11.56□□□□□ -0.56
COL4A3-202ENST00000396578 ADAMTSL5Q6ZMM2 481 aa11.56□□□□□ -0.56
COL4A3-202ENST00000396578 VSIRQ9H7M9 311 aa11.56□□□□□ -0.56
COL4A3-202ENST00000396578 IGHV3-73A0A0B4J1V6 119 aa11.56□□□□□ -0.56
COL4A3-202ENST00000396578 LINC01551Q86U37 167 aa11.56□□□□□ -0.56
COL4A3-202ENST00000396578 TNFRSF14Q92956 283 aa11.56□□□□□ -0.56
COL4A3-202ENST00000396578 CITED1Q99966 193 aa11.56□□□□□ -0.56
COL4A3-202ENST00000396578 ZNF876PQ49A33 203 aa11.55□□□□□ -0.56
COL4A3-202ENST00000396578 CD33P20138 364 aa11.55□□□□□ -0.56
COL4A3-202ENST00000396578 LHX2P50458 406 aa11.55□□□□□ -0.56
COL4A3-202ENST00000396578 CMC4P56277 68 aaPredicted RBP11.55□□□□□ -0.56
COL4A3-202ENST00000396578 PSG3Q16557 428 aa11.55□□□□□ -0.56
COL4A3-202ENST00000396578 LYZL1Q6UWQ5 148 aa11.55□□□□□ -0.56
COL4A3-202ENST00000396578 MRPL27Q9P0M9 148 aaKnown RBP11.55□□□□□ -0.56
COL4A3-202ENST00000396578 ZNF837Q96EG3 531 aaPredicted RBP11.55□□□□□ -0.56
COL4A3-202ENST00000396578 MYMXA0A1B0GTQ4 84 aa11.55□□□□□ -0.56
COL4A3-202ENST00000396578 RPL15P61313 204 aaKnown RBP11.55□□□□□ -0.56
COL4A3-202ENST00000396578 MPV17L2Q567V2 206 aa11.55□□□□□ -0.56
COL4A3-202ENST00000396578 ZNF474Q6S9Z5 364 aaPredicted RBP11.55□□□□□ -0.56
COL4A3-202ENST00000396578 LYZL4Q96KX0 146 aa11.55□□□□□ -0.56
COL4A3-202ENST00000396578 WDR83OSQ9Y284 106 aa11.55□□□□□ -0.56
COL4A3-202ENST00000396578 A0A0A6YYD4 124 aa11.55□□□□□ -0.56
COL4A3-202ENST00000396578 RPL36AP83881 106 aaKnown RBP11.55□□□□□ -0.56
COL4A3-202ENST00000396578 RPL36ALQ969Q0 106 aaKnown RBP11.55□□□□□ -0.56
COL4A3-202ENST00000396578 LSM4Q9Y4Z0 139 aaKnown RBP11.55□□□□□ -0.56
COL4A3-202ENST00000396578 SUMO4Q6EEV6 95 aa11.55□□□□□ -0.56
COL4A3-202ENST00000396578 PCNX1Q96RV3 2341 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 C9JAW5 83 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 MLNRO43193 412 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 C6orf226Q5I0X4 101 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 ZNF625Q96I27 306 aaPredicted RBP11.54□□□□□ -0.56
COL4A3-202ENST00000396578 WNT2P09544 360 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 SP9P0CG40 484 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 ZNF138P52744 262 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 CSTL1Q9H114 145 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 RBMY1FQ15415 496 aaKnown RBP11.54□□□□□ -0.56
COL4A3-202ENST00000396578 TRGV9Q99603 122 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 TIMM21Q9BVV7 248 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 ADAMTS7Q9UKP4 1686 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 C15orf32Q32M92 178 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 TNRC6AQ8NDV7 1962 aaKnown RBP11.54□□□□□ -0.56
COL4A3-202ENST00000396578 TCF20Q9UGU0 1960 aaKnown RBP11.54□□□□□ -0.56
COL4A3-202ENST00000396578 LILRA1O75019 489 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 TCRAP04437 139 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 CSRP3P50461 194 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 CT83Q5H943 113 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 SELENOKQ9Y6D0 94 aa11.54□□□□□ -0.56
COL4A3-202ENST00000396578 H3BMM0 161 aa11.53□□□□□ -0.56
COL4A3-202ENST00000396578 UBE2WQ96B02 151 aa11.53□□□□□ -0.56
COL4A3-202ENST00000396578 SCRT1Q9BWW7 348 aa11.53□□□□□ -0.56
COL4A3-202ENST00000396578 TIMM23O14925 209 aa11.53□□□□□ -0.56
COL4A3-202ENST00000396578 LCN12Q6JVE5 192 aa11.53□□□□□ -0.56
COL4A3-202ENST00000396578 ARHGAP21Q5T5U3 1957 aa11.53□□□□□ -0.56
COL4A3-202ENST00000396578 TRBV7-1A0A0A6YYK4 115 aa11.53□□□□□ -0.56
COL4A3-202ENST00000396578 UBE2DNLQ8IWF7 75 aa11.53□□□□□ -0.56
COL4A3-202ENST00000396578 SPTAN1Q13813 2472 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms