RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 DEFA5Q01523 94 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 PMS2P11Q13670 270 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 ZNF726P1Q15940 193 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 TMEM41BQ5BJD5 291 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 CLLU1Q5K131 121 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 FFAR4Q5NUL3 377 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 FAM74A1Q5RGS3 127 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 KPRPQ5T749 579 aaPredicted RBP6.48□□□□□ -1.37
HERC4-203ENST00000395185 C9orf66Q5T8R8 295 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 CLEC19AQ6UXS0 136 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 LRRC20Q8TCA0 184 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 GATAD1Q8WUU5 269 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 RNF141Q8WVD5 230 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 DUX3Q96PT4 197 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 ELOVL1Q9BW60 279 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 SSBP4Q9BWG4 385 aaPredicted RBP6.48□□□□□ -1.37
HERC4-203ENST00000395185 GNB4Q9HAV0 340 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 DNAJC4Q9NNZ3 241 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 U3KQE9 123 aa6.48□□□□□ -1.37
HERC4-203ENST00000395185 TRRAPQ9Y4A5 3859 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 OR2T8A6NH00 312 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 BMPR1BO00238 502 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 NUPL2O15504 423 aaKnown RBP6.47□□□□□ -1.37
HERC4-203ENST00000395185 EIF4EBP3O60516 100 aaPredicted RBP6.47□□□□□ -1.37
HERC4-203ENST00000395185 IGHV3-23P01764 117 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 FABP1P07148 127 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 OR5G3P0C626 314 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 FHITP49789 147 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 RAB2AP61019 212 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 DEFB136Q30KP8 78 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 ACOT6Q3I5F7 207 aaPredicted RBP6.47□□□□□ -1.37
HERC4-203ENST00000395185 Q56UQ5 140 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 GCSAMLQ5JQS6 135 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 TOMM20LQ6UXN7 152 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 ZNF600Q6ZNG1 722 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 GPHB5Q86YW7 130 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 OR51G1Q8NGK1 321 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 FAM167A-AS1Q96KT0 104 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 SCRT1Q9BWW7 348 aa6.47□□□□□ -1.37
HERC4-203ENST00000395185 PEF1Q9UBV8 284 aaKnown RBP6.47□□□□□ -1.37
HERC4-203ENST00000395185 OVOL1O14753 267 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 GGCTO75223 188 aaKnown RBP6.46□□□□□ -1.38
HERC4-203ENST00000395185 IGHV3-11P01762 117 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 GPR183P32249 361 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 BLOC1S1P78537 153 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 DEFB121Q5J5C9 76 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 AKR1C8PQ5T2L2 129 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 Q6ZRG5 221 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 OR10G4Q8NGN3 311 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 OR10G9Q8NGN4 311 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 OR10G7Q8NGN6 311 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 SUN5Q8TC36 379 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 Q8WTZ3 238 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 RAB24Q969Q5 203 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 SEPSECSQ9HD40 501 aaKnown RBP6.46□□□□□ -1.38
HERC4-203ENST00000395185 MED9Q9NWA0 146 aa6.46□□□□□ -1.38
HERC4-203ENST00000395185 TECRQ9NZ01 308 aaKnown RBP6.46□□□□□ -1.38
HERC4-203ENST00000395185 CTXND1A0A1B0GTU2 59 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 ANKRD34BA5PLL1 514 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 LINC00862A6NCI5 91 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 PPP5D1E7EU14 171 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 K7EMT4 169 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 LGALS9O00182 355 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 NDUFA4O00483 81 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 HYPMO75409 117 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 STAG3L2P0CL84 134 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 STAG3L3P0CL85 134 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 CRYBB3P26998 211 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 ARL3P36405 182 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 ELLP55199 621 aaPredicted RBP6.45□□□□□ -1.38
HERC4-203ENST00000395185 RELQ04864 619 aaPredicted RBP6.45□□□□□ -1.38
HERC4-203ENST00000395185 FHL3Q13643 280 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 KLF5Q13887 457 aaPredicted RBP6.45□□□□□ -1.38
HERC4-203ENST00000395185 USF2Q15853 346 aaPredicted RBP6.45□□□□□ -1.38
HERC4-203ENST00000395185 SSX7Q7RTT5 188 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 OR1L4Q8NGR5 311 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 MRAPQ8TCY5 172 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 RNF125Q96EQ8 232 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 ZNF503Q96F45 646 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 PFDN5Q99471 154 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 RNF2Q99496 336 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 SHANK2-AS3Q9BTD1 123 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 ACTR3CQ9C0K3 210 aaPredicted RBP6.45□□□□□ -1.38
HERC4-203ENST00000395185 FUT9Q9Y231 359 aa6.45□□□□□ -1.38
HERC4-203ENST00000395185 PUS1Q9Y606 427 aaKnown RBP eCLIP6.45□□□□□ -1.38
HERC4-203ENST00000395185 ZNF705EA8MWA4 302 aaPredicted RBP6.44□□□□□ -1.38
HERC4-203ENST00000395185 MRPS12O15235 138 aaKnown RBP6.44□□□□□ -1.38
HERC4-203ENST00000395185 SCGB2A1O75556 95 aa6.44□□□□□ -1.38
HERC4-203ENST00000395185 HOXD3P31249 432 aaPredicted RBP6.44□□□□□ -1.38
HERC4-203ENST00000395185 RHOBP62745 196 aa6.44□□□□□ -1.38
HERC4-203ENST00000395185 EGFEM1PQ0D2K5 195 aa6.44□□□□□ -1.38
HERC4-203ENST00000395185 RPEL1Q2QD12 228 aa6.44□□□□□ -1.38
HERC4-203ENST00000395185 MORN5Q5VZ52 161 aa6.44□□□□□ -1.38
HERC4-203ENST00000395185 SPATA31B1PQ5VZV4 182 aa6.44□□□□□ -1.38
HERC4-203ENST00000395185 TMEM190Q8WZ59 177 aa6.44□□□□□ -1.38
HERC4-203ENST00000395185 DLX4Q92988 240 aaPredicted RBP6.44□□□□□ -1.38
HERC4-203ENST00000395185 MRPL32Q9BYC8 188 aaKnown RBP6.44□□□□□ -1.38
HERC4-203ENST00000395185 WNK1Q9H4A3 2382 aa6.44□□□□□ -1.38
HERC4-203ENST00000395185 IGHV4OR15-8A0A075B7B6 117 aa6.43□□□□□ -1.38
HERC4-203ENST00000395185 A0A087WW49 117 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 243 ms