RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TNFRSF1AP19438 455 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 CD69Q07108 199 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 OR4F17Q8NGA8 305 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 TMUB1Q9BVT8 246 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 AP5S1Q9NUS5 200 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 DKK4Q9UBT3 224 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 CSN1S1P47710 185 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 ARL6IP6Q8N6S5 226 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 IGKV1OR2-108A0A075B7D4 117 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 YPEL1O60688 119 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 NCR2O95944 276 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 EBLN2Q6P2I7 272 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 PRSS57Q6UWY2 283 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 TEX43Q6ZNM6 134 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 YPEL2Q96QA6 119 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 TPSG1Q9NRR2 321 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 SPTBN4Q9H254 2564 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 MTURNQ8N3F0 131 aa10.73□□□□□ -0.69
NFKB1-202ENST00000394820 A0A1B0GWJ7 208 aa10.73□□□□□ -0.69
NFKB1-202ENST00000394820 SMKR1H3BMG3 65 aa10.73□□□□□ -0.69
NFKB1-202ENST00000394820 HLA-DRB1P01911 266 aa10.73□□□□□ -0.69
NFKB1-202ENST00000394820 TWIST1Q15672 202 aa10.73□□□□□ -0.69
NFKB1-202ENST00000394820 C22orf34Q6ZV56 151 aa10.73□□□□□ -0.69
NFKB1-202ENST00000394820 Q9H3A6 140 aa10.73□□□□□ -0.69
NFKB1-202ENST00000394820 ZNF292O60281 2723 aa10.73□□□□□ -0.69
NFKB1-202ENST00000394820 LINC00614P0C842 121 aa10.73□□□□□ -0.69
NFKB1-202ENST00000394820 C1orf229Q6ZS94 237 aaPredicted RBP10.73□□□□□ -0.69
NFKB1-202ENST00000394820 SEM1Q6ZVN7 128 aa10.73□□□□□ -0.69
NFKB1-202ENST00000394820 PLSCR4Q9NRQ2 329 aa10.73□□□□□ -0.69
NFKB1-202ENST00000394820 RPUSD1Q9UJJ7 312 aaKnown RBP10.73□□□□□ -0.69
NFKB1-202ENST00000394820 HIGD1AQ9Y241 93 aa10.73□□□□□ -0.69
NFKB1-202ENST00000394820 TRBV9A0A0B4J1U6 114 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 SRRM5B3KS81 715 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 K7EMI3 77 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 GNG7O60262 68 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 Q5PR19 223 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 SMIM15Q7Z3B0 74 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 MEGF9Q9H1U4 602 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 SLC25A15Q9Y619 301 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 C7orf71A4D174 169 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 ZNF785A8K8V0 405 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 NPIPB11E5RHQ5 1161 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 CLEC3BP05452 202 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 PDLIM4P50479 330 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 UBE2V1Q13404 147 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 COX19Q49B96 90 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 GTF2H5Q6ZYL4 71 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 GRAMD2BQ96HH9 432 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 EPDR1Q9UM22 224 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 PPIAL4EA0A075B759 164 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 ZNF207O43670 478 aaKnown RBP10.72□□□□□ -0.69
NFKB1-202ENST00000394820 IL4P05112 153 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 PPIAL4FP0DN26 164 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 GFRALQ6UXV0 394 aa10.72□□□□□ -0.69
NFKB1-202ENST00000394820 K7ERU9 68 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 PRRG2O14669 202 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 LY6HO94772 140 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 CKS2P33552 79 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 TMEM108Q6UXF1 575 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 LCNL1Q6ZST4 164 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 PIP4P1Q86T03 277 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 RAB1CQ92928 201 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 GPR82Q96P67 336 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 RPP21Q9H633 154 aaKnown RBP10.71□□□□□ -0.69
NFKB1-202ENST00000394820 AAMDCQ9H7C9 122 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 CNTFRP26992 372 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 PRCDQ00LT1 54 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 C1orf185Q5T7R7 199 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 OR4C13Q8NGP0 309 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 FOXA2Q9Y261 457 aaPredicted RBP10.71□□□□□ -0.69
NFKB1-202ENST00000394820 COX11Q9Y6N1 276 aa10.71□□□□□ -0.69
NFKB1-202ENST00000394820 TRGV8A0A0C4DH27 118 aa10.71□□□□□ -0.7
NFKB1-202ENST00000394820 E7EUB6 86 aa10.71□□□□□ -0.7
NFKB1-202ENST00000394820 C15orf65H3BRN8 121 aa10.71□□□□□ -0.7
NFKB1-202ENST00000394820 VSTM2AQ8TAG5 236 aa10.71□□□□□ -0.7
NFKB1-202ENST00000394820 ABHD17AQ96GS6 310 aa10.71□□□□□ -0.7
NFKB1-202ENST00000394820 TRAV8-6A0A0B4J262 113 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 FAM90A27PA6NNH2 459 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 CACNG7P62955 275 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 C12orf54Q6X4T0 127 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 HSPB8Q9UJY1 196 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 USP9YO00507 2555 aaPredicted RBP10.7□□□□□ -0.7
NFKB1-202ENST00000394820 J3QW42 95 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 EVI2AP22794 236 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 CD40P25942 277 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 OR10J3Q5JRS4 329 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 DNLZQ5SXM8 178 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 FAM215AQ9Y5M1 114 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 C9JCJ5 164 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 Q0VG73 95 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 SFXN3Q9BWM7 321 aa10.7□□□□□ -0.7
NFKB1-202ENST00000394820 TM4SF5O14894 197 aa10.69□□□□□ -0.7
NFKB1-202ENST00000394820 RNASE2P10153 161 aaKnown RBP10.69□□□□□ -0.7
NFKB1-202ENST00000394820 RIGQ13278 110 aa10.69□□□□□ -0.7
NFKB1-202ENST00000394820 GOSR1O95249 250 aa10.69□□□□□ -0.7
NFKB1-202ENST00000394820 LINC00310P59036 64 aa10.69□□□□□ -0.7
NFKB1-202ENST00000394820 PLP1P60201 277 aa10.69□□□□□ -0.7
NFKB1-202ENST00000394820 LYPD2Q6UXB3 125 aa10.69□□□□□ -0.7
NFKB1-202ENST00000394820 Q8TAT8 98 aa10.69□□□□□ -0.7
NFKB1-202ENST00000394820 NOTCH2Q04721 2471 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms