RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 TP53TG3Q9ULZ0 132 aa12.14□□□□□ -0.47
UBE2D3-207ENST00000394801 NUPR1O60356 82 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 SLC25A5P05141 298 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 PAFAH1B2P68402 229 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 MINOS1Q5TGZ0 78 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 C5orf17Q8NAS9 161 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 NHLRC2Q8NBF2 726 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 TBX15Q96SF7 602 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 C20orf144Q9BQM9 153 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 MINOS1-NBL1R4GNA1 71 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 ZNF25P17030 456 aaPredicted RBP12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 ZFP36P26651 326 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 GNG5P63218 68 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 Q0VG73 95 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 ZNF562Q6V9R5 426 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 TMEM136Q6ZRR5 245 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 VMO1Q7Z5L0 202 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 MLST8Q9BVC4 326 aa12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 SLC25A39Q9BZJ4 359 aaPredicted RBP12.13□□□□□ -0.47
UBE2D3-207ENST00000394801 A0A1B0GUS0 222 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 IZUMO1RA6ND01 250 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 ZNF705FA8MVS1 300 aaPredicted RBP12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 ZNF705DP0CH99 300 aaPredicted RBP12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 ZNF705BP0CI00 300 aaPredicted RBP12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 CRISP2P16562 243 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 CD24P25063 80 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 LYZP61626 148 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 GAGE1Q13065 139 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 FBLN7Q53RD9 439 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 Q8N6K4 173 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 NUDT10Q8NFP7 164 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 CMTM2Q8TAZ6 248 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 FAM168AQ92567 244 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 NUDT11Q96G61 164 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 RBM14Q96PK6 669 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 CHRDL1Q9BU40 450 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 SERTAD4Q9NUC0 356 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 CHD6Q8TD26 2715 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 GRIFINA4D1Z8 144 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 CDKN1AP38936 164 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 UBE2G1P62253 170 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 RELQ04864 619 aaPredicted RBP12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 LEMD1Q68G75 181 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 GPR82Q96P67 336 aa12.12□□□□□ -0.47
UBE2D3-207ENST00000394801 NPIPB5A8MRT5 1133 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 NDUFS7O75251 213 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 HIST1H1EP10412 219 aaKnown RBP12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 TPPP2P59282 170 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 HES1Q14469 280 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 TEX43Q6ZNM6 134 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 DYNAPQ8N1N2 210 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 ITLN2Q8WWU7 325 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 TMEM190Q8WZ59 177 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 GRAMD2BQ96HH9 432 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 MIEN1Q9BRT3 115 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 SIRPDQ9H106 197 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 Q9H3A6 140 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 DLEU1O43261 78 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 TOMM40O96008 361 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 HOXB4P17483 251 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 TCL1AP56279 114 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 LINC00310P59036 64 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 RASL11AQ6T310 242 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 ZNF705AQ6ZN79 300 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 FMC1Q96HJ9 113 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 FAM103A1Q9BTL3 118 aaKnown RBP12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 NAT8BQ9UHF3 227 aa12.11□□□□□ -0.47
UBE2D3-207ENST00000394801 A0A1W2PRD5 423 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 A0A1W2PRF3 423 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 A0A1W2PRM7 423 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 TCRAP04437 139 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 AMY1AP04745 511 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 EFNA4P52798 201 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 ASPHD1Q5U4P2 390 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 WIPF2Q8TF74 440 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 IGFBPL1Q8WX77 278 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 FANCD2OSQ96PS1 177 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 TMEM208Q9BTX3 173 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 OTORQ9NRC9 128 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 IGLV11-55A0A075B6I3 123 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 SPINK4O60575 86 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 CA1P00915 261 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 HLA-DQA1P01909 254 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 TTC9CQ8N5M4 171 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 ZNF491Q8N8L2 437 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 ZNF48Q96MX3 618 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 ZNF586Q9NXT0 402 aa12.1□□□□□ -0.47
UBE2D3-207ENST00000394801 TRAV30A0A087WSZ9 112 aa12.09□□□□□ -0.47
UBE2D3-207ENST00000394801 LTAP01374 205 aa12.09□□□□□ -0.47
UBE2D3-207ENST00000394801 SLC35B1P78383 322 aa12.09□□□□□ -0.47
UBE2D3-207ENST00000394801 SHANK2-AS3Q9BTD1 123 aa12.09□□□□□ -0.47
UBE2D3-207ENST00000394801 RNF24Q9Y225 148 aa12.09□□□□□ -0.47
UBE2D3-207ENST00000394801 GOLT1BQ9Y3E0 138 aa12.09□□□□□ -0.47
UBE2D3-207ENST00000394801 USP24Q9UPU5 2620 aa12.09□□□□□ -0.47
UBE2D3-207ENST00000394801 TOMM20LQ6UXN7 152 aa12.08□□□□□ -0.47
UBE2D3-207ENST00000394801 Q6ZWC4 215 aa12.08□□□□□ -0.47
UBE2D3-207ENST00000394801 TSKUQ8WUA8 353 aa12.08□□□□□ -0.47
UBE2D3-207ENST00000394801 ARPC1AQ92747 370 aa12.08□□□□□ -0.47
UBE2D3-207ENST00000394801 UBTD1Q9HAC8 227 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms