RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 CCL20P78556 96 aa4.65□□□□□ -1.66
CASC3-202ENST00000394114 RPL19P84098 196 aaKnown RBP4.65□□□□□ -1.66
CASC3-202ENST00000394114 WT1-ASQ06250 92 aa4.65□□□□□ -1.66
CASC3-202ENST00000394114 MMDQ15546 238 aa4.65□□□□□ -1.66
CASC3-202ENST00000394114 MRPL23Q16540 153 aaKnown RBP4.65□□□□□ -1.66
CASC3-202ENST00000394114 MLANAQ16655 118 aa4.65□□□□□ -1.66
CASC3-202ENST00000394114 HSD17B13Q7Z5P4 300 aaPredicted RBP4.65□□□□□ -1.66
CASC3-202ENST00000394114 OR1L8Q8NGR8 309 aa4.65□□□□□ -1.66
CASC3-202ENST00000394114 VSTM2AQ8TAG5 236 aa4.65□□□□□ -1.66
CASC3-202ENST00000394114 PARP11Q9NR21 331 aa4.65□□□□□ -1.66
CASC3-202ENST00000394114 RPRMQ9NS64 109 aa4.65□□□□□ -1.66
CASC3-202ENST00000394114 LOC102724200A0A096LPH7 203 aaPredicted RBP4.65□□□□□ -1.67
CASC3-202ENST00000394114 A8MXK9 166 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 APOC3P02656 99 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 EGR2P11161 476 aaPredicted RBP4.65□□□□□ -1.67
CASC3-202ENST00000394114 SAA4P35542 130 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 LGALS7P47929 136 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 SEC61GP60059 68 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 MRGPRG-AS1Q2M3A8 158 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 GCSAMLQ5JQS6 135 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 RUSC1-AS1Q66K80 236 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 LCN15Q6UWW0 184 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 BRD3OSQ6XYD6 125 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 Q6ZSN1 163 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 Q75L30 129 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 SSX7Q7RTT5 188 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 OR2D3Q8NGH3 330 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 OR5B3Q8NH48 314 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 NDUFA4L2Q9NRX3 87 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 FKBP11Q9NYL4 201 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 ZNF257Q9Y2Q1 563 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 NDUFA7O95182 113 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 PKIAP61925 76 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 PRSS8Q16651 343 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 CLEC12BQ2HXU8 276 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 PPP1R27Q86WC6 154 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 KIR3DL3Q8N743 410 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 Q96MF0 132 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 FAM103A1Q9BTL3 118 aaKnown RBP4.65□□□□□ -1.67
CASC3-202ENST00000394114 NPCDR1Q9BY65 106 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 SIGLEC9Q9Y336 463 aa4.65□□□□□ -1.67
CASC3-202ENST00000394114 IGHV3-21A0A0B4J1V1 117 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 TRAV40A0A0B4J280 105 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 NCBP2LA6PVI3 153 aaKnown RBP4.64□□□□□ -1.67
CASC3-202ENST00000394114 UMAD1C9J7I0 102 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 J3QKU1 62 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 CYB5BO43169 146 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 RNASE2P10153 161 aaKnown RBP4.64□□□□□ -1.67
CASC3-202ENST00000394114 GP9P14770 177 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 RAB5CP51148 216 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 ZNF415Q09FC8 603 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 FABP9Q0Z7S8 132 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 ATP6V1FQ16864 119 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 FFAR4Q5NUL3 377 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 FAM120AOSQ5T036 256 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 ZNF709Q8N972 641 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 EIF5A2Q9GZV4 153 aaKnown RBP4.64□□□□□ -1.67
CASC3-202ENST00000394114 SLC25A22Q9H936 323 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 SOX21Q9Y651 276 aaPredicted RBP4.64□□□□□ -1.67
CASC3-202ENST00000394114 OTOGQ6ZRI0 2925 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 PDZD2O15018 2839 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 C1orf196B1AJZ1 125 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 KRBOX1C9JBD0 128 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 C9JQL5 133 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 RPL27AP46776 148 aaKnown RBP4.64□□□□□ -1.67
CASC3-202ENST00000394114 ERHP84090 104 aaKnown RBP4.64□□□□□ -1.67
CASC3-202ENST00000394114 DEFA5Q01523 94 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 ZNF726P1Q15940 193 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 HAGHQ16775 308 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 MIC13Q5XKP0 118 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 MMD2Q8IY49 270 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 RPP25LQ8N5L8 163 aaKnown RBP4.64□□□□□ -1.67
CASC3-202ENST00000394114 ACY3Q96HD9 319 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 RARRES2Q99969 163 aa4.64□□□□□ -1.67
CASC3-202ENST00000394114 CENPVL3A0A0U1RRI6 287 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 NBR2O15453 112 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 MOSP00540 346 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 CRYGBP07316 175 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 GATA2P23769 480 aaPredicted RBP4.63□□□□□ -1.67
CASC3-202ENST00000394114 UBE2E1P51965 193 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 SSBP2P81877 361 aaPredicted RBP4.63□□□□□ -1.67
CASC3-202ENST00000394114 SPSB3Q6PJ21 355 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 IL34Q6ZMJ4 242 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 OR1L6Q8NGR2 347 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 OR4A5Q8NH83 315 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 OR2T6Q8NHC8 308 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 SRSF12Q8WXF0 261 aaKnown RBP4.63□□□□□ -1.67
CASC3-202ENST00000394114 SGK494Q96LW2 274 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 P2RX4Q99571 388 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 MGST2Q99735 147 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 PSMG3Q9BT73 122 aaPredicted RBP4.63□□□□□ -1.67
CASC3-202ENST00000394114 CR1P17927 2039 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 IGLC7A0M8Q6 106 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 NPFFO15130 113 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 CRYBA1P05813 215 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 IGHV4-38-2P0DP08 117 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 ADCYAP1P18509 176 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 OPRK1P41145 380 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 RIPPLY3P57055 190 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 OR10G4Q8NGN3 311 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms