RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 RPUSD4Q96CM3 377 aaKnown RBP11.78□□□□□ -0.52
MKS1-202ENST00000393119 FANCD2OSQ96PS1 177 aa11.78□□□□□ -0.52
MKS1-202ENST00000393119 TNFRSF19Q9NS68 423 aa11.78□□□□□ -0.52
MKS1-202ENST00000393119 YTHDF2Q9Y5A9 579 aaKnown RBP11.78□□□□□ -0.52
MKS1-202ENST00000393119 PSMB11A5LHX3 300 aa11.78□□□□□ -0.52
MKS1-202ENST00000393119 ECSCRQ19T08 205 aa11.78□□□□□ -0.52
MKS1-202ENST00000393119 Q5PR19 223 aa11.78□□□□□ -0.52
MKS1-202ENST00000393119 LEMD1Q68G75 181 aa11.78□□□□□ -0.52
MKS1-202ENST00000393119 CYB5R2Q6BCY4 276 aa11.78□□□□□ -0.52
MKS1-202ENST00000393119 DERL1Q9BUN8 251 aa11.78□□□□□ -0.52
MKS1-202ENST00000393119 TCRBV4S1A1TA0A5B7 111 aa11.77□□□□□ -0.52
MKS1-202ENST00000393119 PDZD2O15018 2839 aa11.77□□□□□ -0.52
MKS1-202ENST00000393119 ATP6V0E1O15342 81 aa11.77□□□□□ -0.52
MKS1-202ENST00000393119 DLEU1O43261 78 aa11.77□□□□□ -0.52
MKS1-202ENST00000393119 AMY1AP04745 511 aa11.77□□□□□ -0.52
MKS1-202ENST00000393119 G0S2P27469 103 aa11.77□□□□□ -0.52
MKS1-202ENST00000393119 ATP5IP56385 69 aaPredicted RBP11.77□□□□□ -0.52
MKS1-202ENST00000393119 MEF2BQ02080 365 aaPredicted RBP11.77□□□□□ -0.52
MKS1-202ENST00000393119 TIGITQ495A1 244 aa11.77□□□□□ -0.52
MKS1-202ENST00000393119 Q6ZS46 218 aa11.77□□□□□ -0.52
MKS1-202ENST00000393119 PSMG3-AS1Q96PY0 264 aa11.77□□□□□ -0.52
MKS1-202ENST00000393119 AURKAIP1Q9NWT8 199 aaPredicted RBP11.77□□□□□ -0.52
MKS1-202ENST00000393119 TLN2Q9Y4G6 2542 aa11.77□□□□□ -0.53
MKS1-202ENST00000393119 BRS3P32247 399 aa11.77□□□□□ -0.53
MKS1-202ENST00000393119 GALR1P47211 349 aa11.77□□□□□ -0.53
MKS1-202ENST00000393119 TMEM241Q24JQ0 296 aa11.77□□□□□ -0.53
MKS1-202ENST00000393119 KRTAP1-3Q8IUG1 177 aa11.77□□□□□ -0.53
MKS1-202ENST00000393119 CIARTQ8N365 385 aaPredicted RBP11.77□□□□□ -0.53
MKS1-202ENST00000393119 Q96MF0 132 aa11.77□□□□□ -0.53
MKS1-202ENST00000393119 TMEM208Q9BTX3 173 aa11.77□□□□□ -0.53
MKS1-202ENST00000393119 ELOVL1Q9BW60 279 aa11.77□□□□□ -0.53
MKS1-202ENST00000393119 HECTD1Q9ULT8 2610 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 TMEM250H0YL14 139 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 OR2J3O76001 311 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 OR5G3P0C626 314 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 PYYP10082 97 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 GCHFRP30047 84 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 PSMB3P49720 205 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 RHOBP62745 196 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 THAP8Q8NA92 274 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 OR1B1Q8NGR6 318 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 RASL11BQ9BPW5 248 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 SMIM7Q9BQ49 75 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 FUT9Q9Y231 359 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 C11orf94C9JXX5 98 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 NDUFB8O95169 186 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 ADIRFQ15847 76 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 TMEM116Q8NCL8 245 aa11.76□□□□□ -0.53
MKS1-202ENST00000393119 IGHV3-35A0A0C4DH35 117 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 PGPEP1LA6NFU8 196 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 H3BTX0 84 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 H3BUX3 64 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 OR7C2O60412 319 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 SLC25A16P16260 332 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 ZNF25P17030 456 aaPredicted RBP11.75□□□□□ -0.53
MKS1-202ENST00000393119 IMMP2LQ96T52 175 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 TMUB1Q9BVT8 246 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 ITPR3Q14573 2671 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 IGHV3OR16-8A0A075B7F1 116 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 H7BYZ3 331 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 M0QZK8 103 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 IFNA1P01562 189 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 LINC00614P0C842 121 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 IGLC1P0CG04 106 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 DSCR9P59020 149 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 RPL15P61313 204 aaKnown RBP11.75□□□□□ -0.53
MKS1-202ENST00000393119 C5orf56Q8N8D9 126 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 ANAPC16Q96DE5 110 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 MS4A10Q96PG2 267 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 SLC25A2Q9BXI2 301 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 DNAJC4Q9NNZ3 241 aa11.75□□□□□ -0.53
MKS1-202ENST00000393119 CXorf1O96002 111 aa11.74□□□□□ -0.53
MKS1-202ENST00000393119 IGKV1-17P01599 117 aa11.74□□□□□ -0.53
MKS1-202ENST00000393119 PSG1P11464 419 aa11.74□□□□□ -0.53
MKS1-202ENST00000393119 SRP14P37108 136 aaKnown RBP11.74□□□□□ -0.53
MKS1-202ENST00000393119 LINC01356Q8N9X3 169 aa11.74□□□□□ -0.53
MKS1-202ENST00000393119 WFDC11Q8NEX6 87 aa11.74□□□□□ -0.53
MKS1-202ENST00000393119 FAM167A-AS1Q96KT0 104 aa11.74□□□□□ -0.53
MKS1-202ENST00000393119 ZNF355PQ9NSJ1 428 aa11.74□□□□□ -0.53
MKS1-202ENST00000393119 CBY1Q9Y3M2 126 aa11.74□□□□□ -0.53
MKS1-202ENST00000393119 F8W735 103 aaPredicted RBP11.74□□□□□ -0.53
MKS1-202ENST00000393119 COX7A2P2O60397 106 aa11.74□□□□□ -0.53
MKS1-202ENST00000393119 BLCAPP62952 87 aa11.74□□□□□ -0.53
MKS1-202ENST00000393119 UNQ5815/PRO19632Q6UWF5 114 aa11.74□□□□□ -0.53
MKS1-202ENST00000393119 NECAP1Q8NC96 275 aa11.74□□□□□ -0.53
MKS1-202ENST00000393119 IGLV11-55A0A075B6I3 123 aa11.73□□□□□ -0.53
MKS1-202ENST00000393119 SCO2A0A1W2PP80 73 aa11.73□□□□□ -0.53
MKS1-202ENST00000393119 IGHV4-31P0DP07 118 aa11.73□□□□□ -0.53
MKS1-202ENST00000393119 LINC00305Q7Z4B0 112 aa11.73□□□□□ -0.53
MKS1-202ENST00000393119 MRPL41Q8IXM3 137 aaKnown RBP11.73□□□□□ -0.53
MKS1-202ENST00000393119 OR5B12Q96R08 314 aa11.73□□□□□ -0.53
MKS1-202ENST00000393119 PARLQ9H300 379 aa11.73□□□□□ -0.53
MKS1-202ENST00000393119 GOLT1BQ9Y3E0 138 aa11.73□□□□□ -0.53
MKS1-202ENST00000393119 CREBBPQ92793 2442 aa11.73□□□□□ -0.53
MKS1-202ENST00000393119 NDUFB4O95168 129 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 HLA-DRB1P01911 266 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 NPSP0C0P6 89 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 CNN1P51911 297 aaKnown RBP11.72□□□□□ -0.53
MKS1-202ENST00000393119 C10orf113Q5VZT2 155 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 TTC9CQ8N5M4 171 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms