RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 SPTBN1Q01082 2364 aaKnown RBP10.29□□□□□ -0.76
CLTC-202ENST00000393043 FOXC2Q99958 501 aa10.29□□□□□ -0.76
CLTC-202ENST00000393043 TRBV7-1A0A0A6YYK4 115 aa10.29□□□□□ -0.76
CLTC-202ENST00000393043 DOCK9Q9BZ29 2069 aa10.29□□□□□ -0.76
CLTC-202ENST00000393043 DKK1O94907 266 aa10.29□□□□□ -0.76
CLTC-202ENST00000393043 TMEM50AO95807 157 aa10.29□□□□□ -0.76
CLTC-202ENST00000393043 MST1LQ2TV78 715 aa10.29□□□□□ -0.76
CLTC-202ENST00000393043 C14orf144Q96I85 54 aa10.29□□□□□ -0.76
CLTC-202ENST00000393043 HIST1H2BLQ99880 126 aa10.29□□□□□ -0.76
CLTC-202ENST00000393043 TMEM14BQ9NUH8 114 aa10.29□□□□□ -0.76
CLTC-202ENST00000393043 LDLRAD2Q5SZI1 272 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 TMEM170BQ5T4T1 132 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 HIST3H2BBQ8N257 126 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 JMJD8Q96S16 334 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 DERL1Q9BUN8 251 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 PLXNB3Q9ULL4 1909 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 HBDP02042 147 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 KIAA2026Q5HYC2 2103 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 Q8NFD4 153 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 YAE1D1Q9NRH1 226 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 IGLV3-9A0A075B6K5 115 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 TRAV8-6A0A0B4J262 113 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 TTC9CQ8N5M4 171 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 LIME1Q9H400 295 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 RPRMLQ8N4K4 120 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 LINC01587Q99440 93 aa10.28□□□□□ -0.76
CLTC-202ENST00000393043 PEF1Q9UBV8 284 aaKnown RBP10.28□□□□□ -0.76
CLTC-202ENST00000393043 TOMM40O96008 361 aa10.27□□□□□ -0.76
CLTC-202ENST00000393043 CA1P00915 261 aaPredicted RBP10.27□□□□□ -0.76
CLTC-202ENST00000393043 FAM90A2PQ658T7 463 aa10.27□□□□□ -0.76
CLTC-202ENST00000393043 DENND4CQ5VZ89 1909 aa10.27□□□□□ -0.76
CLTC-202ENST00000393043 CACNA1HO95180 2353 aa10.27□□□□□ -0.76
CLTC-202ENST00000393043 CD7P09564 240 aa10.27□□□□□ -0.76
CLTC-202ENST00000393043 SMIM13P0DJ93 91 aa10.27□□□□□ -0.76
CLTC-202ENST00000393043 TEX36Q5VZQ5 186 aa10.27□□□□□ -0.76
CLTC-202ENST00000393043 EXOC3-AS1Q8N2X6 119 aa10.27□□□□□ -0.77
CLTC-202ENST00000393043 CRIM1Q9NZV1 1036 aa10.27□□□□□ -0.77
CLTC-202ENST00000393043 PAX9P55771 341 aa10.27□□□□□ -0.77
CLTC-202ENST00000393043 FER1L5A0AVI2 2057 aa10.27□□□□□ -0.77
CLTC-202ENST00000393043 ADCYAP1P18509 176 aa10.27□□□□□ -0.77
CLTC-202ENST00000393043 SRSF1Q07955 248 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLTC-202ENST00000393043 COTL1Q14019 142 aa10.27□□□□□ -0.77
CLTC-202ENST00000393043 ZNF833PQ6ZTB9 187 aa10.27□□□□□ -0.77
CLTC-202ENST00000393043 C9orf139Q6ZV77 190 aa10.27□□□□□ -0.77
CLTC-202ENST00000393043 USMG5Q96IX5 58 aa10.27□□□□□ -0.77
CLTC-202ENST00000393043 NDUFAF3Q9BU61 184 aa10.27□□□□□ -0.77
CLTC-202ENST00000393043 LINC00311Q8N616 119 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 TMEM101Q96IK0 257 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 C2orf88Q9BSF0 95 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 ST20Q9HBF5 79 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 TRAV9-2A0A087WT02 112 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 H7C2G1 150 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 NDUFS8O00217 210 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 PLP1P60201 277 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 MEIG1Q5JSS6 88 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 A0A1W2PPI3 338 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 NPIPB5A8MRT5 1133 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 C17orf58Q2M2W7 97 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 LINC01559Q495D7 138 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 ORMDL2Q53FV1 153 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 NIT1Q86X76 327 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 TMEM219Q86XT9 240 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 LINC00527Q9UJ94 153 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 FAM215AQ9Y5M1 114 aa10.26□□□□□ -0.77
CLTC-202ENST00000393043 LINC01549A6NIU2 74 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 RPL15P61313 204 aaKnown RBP10.25□□□□□ -0.77
CLTC-202ENST00000393043 PRR30Q53SZ7 412 aaPredicted RBP10.25□□□□□ -0.77
CLTC-202ENST00000393043 KLF17Q5JT82 389 aaPredicted RBP10.25□□□□□ -0.77
CLTC-202ENST00000393043 ACTL10Q5JWF8 245 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 GLMPQ8WWB7 406 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 AKAP6Q13023 2319 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 TRGV11A0A075B6L2 103 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 H3BUX3 64 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 SLC25A16P16260 332 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 SUMO2P61956 95 aaKnown RBP10.25□□□□□ -0.77
CLTC-202ENST00000393043 SMIM12Q96EX1 92 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 NDUFA4L2Q9NRX3 87 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 A0A1B0GV90 55 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 WIPF3A6NGB9 483 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 FAM223BA6NKX1 122 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 IGKV1-39P01597 117 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 IGKV1D-39P04432 117 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 NBL1P41271 181 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 FBLN7Q53RD9 439 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 ZNF562Q6V9R5 426 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 FAM223AQ8IWN6 122 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 ALKBH7Q9BT30 221 aaPredicted RBP10.25□□□□□ -0.77
CLTC-202ENST00000393043 C15orf65H3BRN8 121 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 AMBPP02760 352 aa10.25□□□□□ -0.77
CLTC-202ENST00000393043 IGKV2-40A0A087WW87 121 aaPredicted RBP10.24□□□□□ -0.77
CLTC-202ENST00000393043 IGKV2D-40P01614 121 aaPredicted RBP10.24□□□□□ -0.77
CLTC-202ENST00000393043 BPESC1Q9GZL8 116 aa10.24□□□□□ -0.77
CLTC-202ENST00000393043 TMEM8BA6NDV4 472 aa10.24□□□□□ -0.77
CLTC-202ENST00000393043 ZNF138P52744 262 aa10.24□□□□□ -0.77
CLTC-202ENST00000393043 ZNF256Q9Y2P7 627 aaPredicted RBP10.24□□□□□ -0.77
CLTC-202ENST00000393043 H3BRM9 83 aa10.24□□□□□ -0.77
CLTC-202ENST00000393043 PDE6HQ13956 83 aa10.24□□□□□ -0.77
CLTC-202ENST00000393043 PSG3Q16557 428 aa10.24□□□□□ -0.77
CLTC-202ENST00000393043 PSMB11A5LHX3 300 aa10.24□□□□□ -0.77
CLTC-202ENST00000393043 Q6ZSR3 168 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms