RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 MARCOQ9UEW3 520 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-205ENST00000391970 TP53TG1Q9Y2A0 90 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 ZNF443Q9Y2A4 671 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-205ENST00000391970 ORC6Q9Y5N6 252 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 TRIP11Q15643 1979 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 ANKRD36A6QL64 1941 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 RALGAPA2Q2PPJ7 1873 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 KIAA1671Q9BY89 1806 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 NOTCH2Q04721 2471 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 DOCK8Q8NF50 2099 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 MCM3APO60318 1980 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 SCN8AQ9UQD0 1980 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 NCKAP5O14513 1909 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 BPTFQ12830 3046 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 PLXNA1Q9UIW2 1896 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 KIF26AQ9ULI4 1882 aaPredicted RBP1.76□□□□□ -2.13
PTPRC-205ENST00000391970 TRAV40A0A0B4J280 105 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 SPRR5A0A1B0GTR4 108 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 SPAARA0A1B0GVQ0 90 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 IRGMA1A4Y4 181 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 MAP1LC3B2A6NCE7 125 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 ZNF860A6NHJ4 632 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 CEACAM18A8MTB9 384 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 C17orf112F2Z3M2 114 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 LY6LH3BQJ8 138 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 RER1O15258 196 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 TRAPPC6AO75865 159 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 OR7C1O76099 320 aaPredicted RBP1.76□□□□□ -2.13
PTPRC-205ENST00000391970 SFT2D2O95562 160 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 TRGC2P03986 189 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 P0DMU3 169 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 FAM231AP0DMU4 169 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 FAM231CP0DMU5 169 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 OR12D1P0DN82 309 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 CD34P28906 385 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 GRPRP30550 384 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 DAPP51397 102 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 KRTAP10-8P60410 259 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 HSPE1P61604 102 aaKnown RBP1.76□□□□□ -2.13
PTPRC-205ENST00000391970 HLA-DRB3P79483 266 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 SMAGPQ0VAQ4 97 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 LAMTOR4Q0VGL1 99 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 IL15RAQ13261 267 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 MMDQ15546 238 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 PMCHL1Q16048 86 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 LY6EQ16553 131 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 HLA-DRB5Q30154 266 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 SPRNQ5BIV9 151 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 LCE3AQ5TA76 89 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 AADACL3Q5VUY0 350 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 TMEM215Q68D42 235 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 TNFAIP8L2Q6P589 184 aaPredicted RBP1.76□□□□□ -2.13
PTPRC-205ENST00000391970 UNQ9165/PRO28630Q6UXU0 137 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 ZCCHC23Q6ZST2 131 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 Q6ZT83 130 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 FAM19A1Q7Z5A9 133 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 HMGN2P46Q86SG4 172 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 SLC25A45Q8N413 288 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 TMEM86BQ8N661 226 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 DRAM1Q8N682 238 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.76□□□□□ -2.13
PTPRC-205ENST00000391970 OR51A4Q8NGJ6 313 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 OR6K6Q8NGW6 343 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 OR2AE1Q8NHA4 323 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 RTN4IP1Q8WWV3 396 aaPredicted RBP1.76□□□□□ -2.13
PTPRC-205ENST00000391970 MBD3L1Q8WWY6 194 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 BAALCQ8WXS3 180 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 AQP3Q92482 292 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 PSMF1Q92530 271 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 RAB8BQ92930 207 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 MAL2Q969L2 176 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 C18orf15Q96N68 181 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 CHCHD7Q9BUK0 85 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 EMC6Q9BV81 110 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 MAP1LC3BQ9GZQ8 125 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 LPAR5Q9H1C0 372 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 ATG5Q9H1Y0 275 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 SH3BGRL3Q9H299 93 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 ABRACLQ9P1F3 81 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 RABAC1Q9UI14 185 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 ZNF230Q9UIE0 474 aaPredicted RBP1.76□□□□□ -2.13
PTPRC-205ENST00000391970 CYSLTR1Q9Y271 337 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 COQ4Q9Y3A0 265 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 S4R3C0 116 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 ZNF831Q5JPB2 1677 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 CITO14578 2027 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 DENND4CQ5VZ89 1909 aa1.76□□□□□ -2.13
PTPRC-205ENST00000391970 OBSL1O75147 1896 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 PLXNA3P51805 1871 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 IGLV3-12A0A075B6K2 115 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 hCG_1818297A0A087WSY0 165 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 IGHV3-49A0A0A0MS15 119 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 TRAV1-1A0A0B4J248 108 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 TMEM235A6NFC5 223 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 UMAD1C9J7I0 102 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 LINC01619G3V211 115 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 TMEM250H0YL14 139 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 H3BQ15 152 aa1.75□□□□□ -2.13
PTPRC-205ENST00000391970 HMGB3O15347 200 aaKnown RBP1.75□□□□□ -2.13
PTPRC-205ENST00000391970 TRBV12-3P01733 135 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms