RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 HIST3H3Q16695 136 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 LYRM7Q5U5X0 104 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 OR5AS1Q8N127 324 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 OR51D1Q8NGF3 324 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 KLK6Q92876 244 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 SLC35B4Q969S0 331 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 MUCL1Q96DR8 90 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 CCL19Q99731 98 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 CMSS1Q9BQ75 279 aaKnown RBP-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 MRPS26Q9BYN8 205 aaKnown RBP-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 OR51I1Q9H343 314 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 CMTM6Q9NX76 183 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 UBAP1Q9NZ09 502 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 USE1Q9NZ43 259 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 FANCMQ8IYD8 2048 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 PIEZO1Q92508 2521 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 BCL9O00512 1426 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 C9orf84Q5VXU9 1444 aa-0.3□□□□□ -2.46
SNORD28B-201ENST00000390993 PHRF1Q9P1Y6 1649 aaKnown RBP-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 ECM29Q5VYK3 1845 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 MED1Q15648 1581 aaPredicted RBP-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 TTC28Q96AY4 2481 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 A0A096LPI6 279 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 LOC107984156A0A0G2JMH3 177 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 FAM159BA6NKW6 160 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 H0Y980 276 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 FXYD1O00168 92 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 SERPINE1P05121 402 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 OR10J4P0C629 311 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 IFITM1P13164 125 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 HIST1H1TP22492 207 aaPredicted RBP-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 PPIBP23284 216 aaKnown RBP-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 PSMB6P28072 239 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 RPL5P46777 297 aaKnown RBP-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 CAV3P56539 151 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 SPCS3P61009 180 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 KRR1Q13601 381 aaKnown RBP-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 OCIAD2Q56VL3 154 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 CASC2Q6XLA1 102 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 LINC00299Q6ZSB3 139 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 ARL17AQ8IVW1 177 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 OR6V1Q8N148 313 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 C10orf111Q8N326 155 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 OR52R1Q8NGF1 315 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 RMND5BQ96G75 393 aaPredicted RBP-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 SLC25A21Q9BQT8 299 aaPredicted RBP-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 PROK2Q9HC23 129 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 HMCN2Q8NDA2 5059 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 MGAMO43451 1857 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 KDM6BO15054 1643 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 WNK2Q9Y3S1 2297 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 SIP14410 1827 aa-0.31□□□□□ -2.46
SNORD28B-201ENST00000390993 OR4C46A6NHA9 309 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 IQCF5A8MTL0 148 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 M0R233 179 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 NDUFB3O43676 98 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 NDUFS6O75380 124 aaKnown RBP-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 OR7C1O76099 320 aaPredicted RBP-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 DEXIO95424 95 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 COX5BP10606 129 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 HADHBP55084 474 aaKnown RBP-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 SKP1P63208 163 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 BCL2L15Q5TBC7 163 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 CLEC6AQ6EIG7 209 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 SFXN4Q6P4A7 337 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 CD200R1LQ6Q8B3 271 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 VMO1Q7Z5L0 202 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 C5orf17Q8NAS9 161 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 OR10K1Q8NGX5 313 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 WFDC5Q8TCV5 224 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 KIFC1Q9BW19 673 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 TVP23BQ9NYZ1 205 aa-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 SYNE2Q8WXH0 6885 aaKnown RBP-0.32□□□□□ -2.46
SNORD28B-201ENST00000390993 CACNA1HO95180 2353 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 FSIP2Q5CZC0 6907 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 RIMBP3CA6NJZ7 1639 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 RIMBP3BA6NNM3 1639 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 RIMBP3Q9UFD9 1639 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 TRAV27A0A087WT01 109 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 SULT1C4O75897 302 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 CALB1P05937 261 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 SULT1A1P50225 295 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 UBE2G2P60604 165 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 RPS20P60866 119 aaKnown RBP-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 EIF3IQ13347 325 aaKnown RBP-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 CCDC122Q5T0U0 273 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 EIF5AL1Q6IS14 154 aaKnown RBP-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 FAM151BQ6UXP7 276 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 Q8IYB0 196 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 OR51A2Q8NGJ7 313 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 CT55Q8WUE5 264 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 ZNF75CPQ92670 426 aaPredicted RBP-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 RAB37Q96AX2 223 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 PLEKHB2Q96CS7 222 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 PPP1R2P1Q96PQ5 205 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 GGACTQ9BVM4 153 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 RNF122Q9H9V4 155 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 IMP3Q9NV31 184 aaKnown RBP-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 NOSIPQ9Y314 301 aaKnown RBP-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 BCORL1Q5H9F3 1711 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms