RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 ATP6V1E1P36543 226 aa-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 HIST1H2BDP58876 126 aa-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 HIST1H2BCP62807 126 aa-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 CDK6Q00534 326 aa-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 EMX2Q04743 252 aa-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 HIST2H2BEQ16778 126 aa-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 HIST2H2BFQ5QNW6 126 aaPredicted RBP-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 C1orf134Q5TEV5 83 aa-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 FAM74A4Q5TZK3 123 aa-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 RPL22L1Q6P5R6 122 aaKnown RBP-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 HAVCR2Q8TDQ0 301 aa-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 HIST1H2BHQ93079 126 aa-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 HIST1H2BNQ99877 126 aa-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 HIST1H2BMQ99879 126 aa-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 COMMD9Q9P000 198 aa-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 NOSIPQ9Y314 301 aaKnown RBP-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 MED1Q15648 1581 aaPredicted RBP-3.04□□□□□ -2.9
TRAJ53-201ENST00000390485 TRGV1A0A0A0MS02 117 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 TRAV17A0A0B4J275 112 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 METTL15A6NJ78 407 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 CCRL2O00421 344 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 CXCL11O14625 94 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 TGOLN2O43493 480 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 PIAS1O75925 651 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 ASS1P00966 412 aaKnown RBP-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 GYPBP06028 91 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 OR4E1P0C645 316 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 VBP1P61758 197 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 HBA1P69905 142 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 JOSD1Q15040 202 aaPredicted RBP-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 GRK1Q15835 563 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 IQCJQ1A5X6 159 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 OR51A2Q8NGJ7 313 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 OR2T10Q8NGZ9 312 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 RAB37Q96AX2 223 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 ADAT3Q96EY9 351 aaPredicted RBP-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 ANKRD36BP1Q96IX9 119 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 PACRGQ96M98 296 aaPredicted RBP-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 OR52E6Q96RD3 313 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 LINC00467Q9BRT7 94 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 HDHD2Q9H0R4 259 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 PARVAQ9NVD7 372 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 GCNT4Q9P109 453 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 TP73-AS1Q9UF72 201 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 ERGIC3Q9Y282 383 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 NCOA1Q15788 1441 aa-3.05□□□□□ -2.9
TRAJ53-201ENST00000390485 C5orf49A4QMS7 147 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 OR4C45A6NMZ5 311 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 IFITM5A6NNB3 132 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 C9JAW5 83 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 NOL3O60936 208 aaKnown RBP-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 MT1HL1P0DM35 61 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 KCNE1P15382 129 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 CFL1P23528 166 aaKnown RBP-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 ATP5IP56385 69 aaPredicted RBP-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 BEX3Q00994 111 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 TSNQ15631 228 aaKnown RBP-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 EXOC3L4Q17RC7 722 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 LPCAT3Q6P1A2 487 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 ARPINQ7Z6K5 226 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 TSEN15Q8WW01 171 aaKnown RBP-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 RASD2Q96D21 266 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 SYT4Q9H2B2 425 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 OSTCQ9NRP0 149 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 UTP11Q9Y3A2 253 aaKnown RBP-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 SPCS1Q9Y6A9 102 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 V9GYY9 64 aa-3.06□□□□□ -2.9
TRAJ53-201ENST00000390485 CPDO75976 1380 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 HIGD1CA8MV81 97 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 WBP4O75554 376 aaKnown RBP-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 DYNLT1P63172 113 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 EIF5AP63241 154 aaKnown RBP-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 MT1XP80297 61 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 HAMPP81172 84 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 CARD17Q5XLA6 110 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 C5orf46Q6UWT4 87 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 Q6ZRX8 168 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 AGR3Q8TD06 166 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 MCUR1Q96AQ8 359 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 CIB1Q99828 191 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 C3orf18Q9UK00 162 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 BLOC1S6Q9UL45 172 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 LY96Q9Y6Y9 160 aa-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 SMG1Q96Q15 3661 aaKnown RBP-3.07□□□□□ -2.9
TRAJ53-201ENST00000390485 TRBV20OR9-2A0A075B6H5 130 aa-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 TRAV27A0A087WT01 109 aa-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 FXYD6-FXYD2A0A087WZ82 144 aa-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 A0A0J9YY10 115 aa-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 A0A1B0GX78 115 aa-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 ANP32AP39687 249 aaKnown RBP-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 PSMD4P55036 377 aaKnown RBP-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 H3F3AP84243 136 aa-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 EIF3MQ7L2H7 374 aaKnown RBP-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 C12orf45Q8N5I9 185 aaPredicted RBP-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 OR10D3Q8NH80 312 aa-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 SLAMF6Q96DU3 332 aa-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 TMEM242Q9NWH2 141 aa-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 ANK1P16157 1881 aa-3.08□□□□□ -2.9
TRAJ53-201ENST00000390485 MYO9AB2RTY4 2548 aa-3.09□□□□□ -2.9
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms