RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 GEMIN7Q9H840 131 aaKnown RBP6.57□□□□□ -1.36
NCBP3-201ENST00000389005 UBE2V1Q13404 147 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 OR9G4Q8NGQ1 327 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 C8orf46Q8TAG6 207 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 COLQQ9Y215 455 aaPredicted RBP6.57□□□□□ -1.36
NCBP3-201ENST00000389005 IL15RAQ13261 267 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 FAM159AQ6UWV7 190 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 SFTPCP11686 197 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 FAM57AQ8TBR7 257 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 CEACAM4O75871 244 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 TCRAP04437 139 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 CSRP1P21291 193 aaKnown RBP6.57□□□□□ -1.36
NCBP3-201ENST00000389005 RIPPLY3P57055 190 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 PAX9P55771 341 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 Q0VG73 95 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 WIPF3A6NGB9 483 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 TRGV9Q99603 122 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 APOMO95445 188 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 TMEM190Q8WZ59 177 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 VKORC1Q9BQB6 163 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 KLF2Q9Y5W3 355 aaPredicted RBP6.57□□□□□ -1.36
NCBP3-201ENST00000389005 IGHV1-46P01743 117 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 LINC00205P59089 165 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 Q0VFX4 171 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 MPV17L2Q567V2 206 aa6.57□□□□□ -1.36
NCBP3-201ENST00000389005 PRB3Q04118 309 aaPredicted RBP6.56□□□□□ -1.36
NCBP3-201ENST00000389005 LHFPL4Q7Z7J7 247 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 METRNQ9UJH8 293 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 ZCCHC24Q8N2G6 241 aaKnown RBP6.56□□□□□ -1.36
NCBP3-201ENST00000389005 DDB2Q92466 427 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 SYS1-DBNDD2H3BUS1 97 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 UCNP55089 124 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 CDKN1AP38936 164 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 EMP1P54849 157 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 FAM71F2Q6NXP2 309 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 SLC50A1Q9BRV3 221 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 MYOD1P15172 320 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 ZNF726P1Q15940 193 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 DMRTC2Q8IXT2 367 aaPredicted RBP6.56□□□□□ -1.36
NCBP3-201ENST00000389005 A0A087X0K7 114 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 NAA38Q9BRA0 125 aaKnown RBP6.56□□□□□ -1.36
NCBP3-201ENST00000389005 MBNL3Q9NUK0 354 aaKnown RBP6.56□□□□□ -1.36
NCBP3-201ENST00000389005 LY6EQ16553 131 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 EXOC3-AS1Q8N2X6 119 aa6.56□□□□□ -1.36
NCBP3-201ENST00000389005 SNRPD3P62318 126 aaKnown RBP6.55□□□□□ -1.36
NCBP3-201ENST00000389005 CLEC2AQ6UVW9 174 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 MRPS16Q9Y3D3 137 aaKnown RBP6.55□□□□□ -1.36
NCBP3-201ENST00000389005 ZNF479Q96JC4 524 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 GUSBP1Q15486 140 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 MLNRO43193 412 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 CCDC168Q8NDH2 2452 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 H7C1H1 209 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 SAMD5Q5TGI4 173 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 PMS2P5A8MQ11 134 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 IGKV3-20P01619 116 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 CLEC19AQ6UXS0 136 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 TMEM167AQ8TBQ9 72 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 MEIG1Q5JSS6 88 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 LYPD6BQ8NI32 183 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 COL4A6Q14031 1691 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 D6R8Y8 96 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 COLCA1Q6ZS62 124 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 SELENOKQ9Y6D0 94 aa6.55□□□□□ -1.36
NCBP3-201ENST00000389005 TGFAP01135 160 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 IGKCP01834 107 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 RNF166Q96A37 237 aaPredicted RBP6.54□□□□□ -1.36
NCBP3-201ENST00000389005 FRMPD3Q5JV73 1810 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 ERVK11-1P61568 191 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 SFTA2Q6UW10 78 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 COX11Q9Y6N1 276 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 IGKV1-39P01597 117 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 IGKV1D-39P04432 117 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 RNASE2P10153 161 aaKnown RBP6.54□□□□□ -1.36
NCBP3-201ENST00000389005 PSG1P11464 419 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 RAX2Q96IS3 184 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 RNASE4P34096 147 aaKnown RBP6.54□□□□□ -1.36
NCBP3-201ENST00000389005 LINC01559Q495D7 138 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 SCRT1Q9BWW7 348 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 PLSCR4Q9NRQ2 329 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 EVI2AP22794 236 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 RPRMLQ8N4K4 120 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 SRSF1Q07955 248 aaKnown RBP eCLIP6.54□□□□□ -1.363e-9■■■■□ 23.5
NCBP3-201ENST00000389005 SMPXQ9UHP9 88 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 IGKV1D-17A0A075B6S4 117 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 A0A0G2JLM5 398 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 FNDC10F2Z333 226 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 TMEM105Q8N8V8 129 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 C18orf32Q8TCD1 76 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 VCX2Q9H322 139 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 IGHV3OR16-10A0A075B7F0 116 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 NCR2O95944 276 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 PRB4P10163 310 aaPredicted RBP6.54□□□□□ -1.36
NCBP3-201ENST00000389005 PAX1P15863 534 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 ZNF138P52744 262 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 TRAV8-1A0A0A6YYK1 113 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 TIMM23O14925 209 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 SUMO2P61956 95 aaKnown RBP6.54□□□□□ -1.36
NCBP3-201ENST00000389005 Q6ZWC4 215 aa6.54□□□□□ -1.36
NCBP3-201ENST00000389005 SLC25A39Q9BZJ4 359 aaPredicted RBP6.54□□□□□ -1.36
NCBP3-201ENST00000389005 PPIFP30405 207 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms