RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 DLL1O00548 723 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 ARMS2P0C7Q2 107 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 PSG3Q16557 428 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 C17orf58Q2M2W7 97 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 CR1LQ2VPA4 569 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 ZNF788Q6ZQV5 615 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 OR4X2Q8NGF9 303 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 PCNX2A6NKB5 2137 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 LOC389332A0A1B0GUA5 103 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 TMEM189A5PLL7 270 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 NKX2-8O15522 239 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 SAA1P0DJI8 122 aaPredicted RBP12.03□□□□□ -0.48
CTNS-202ENST00000381870 ORM2P19652 201 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 CACNG8Q8WXS5 425 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 FMC1Q96HJ9 113 aa12.03□□□□□ -0.48
CTNS-202ENST00000381870 TCRBV4S1A1TA0A5B7 111 aa12.02□□□□□ -0.48
CTNS-202ENST00000381870 NPIPB6E9PJ23 425 aa12.02□□□□□ -0.48
CTNS-202ENST00000381870 K7ERJ3 54 aa12.02□□□□□ -0.48
CTNS-202ENST00000381870 RAB9AP51151 201 aa12.02□□□□□ -0.48
CTNS-202ENST00000381870 CD300EQ496F6 205 aaPredicted RBP12.02□□□□□ -0.48
CTNS-202ENST00000381870 TIMM23BQ5SRD1 257 aa12.02□□□□□ -0.48
CTNS-202ENST00000381870 CCDC144NLQ6NUI1 221 aa12.02□□□□□ -0.48
CTNS-202ENST00000381870 RBMXL3Q8N7X1 1067 aaKnown RBP12.02□□□□□ -0.48
CTNS-202ENST00000381870 SIT1Q9Y3P8 196 aa12.02□□□□□ -0.48
CTNS-202ENST00000381870 SPAARA0A1B0GVQ0 90 aa12.02□□□□□ -0.49
CTNS-202ENST00000381870 SIVA1O15304 175 aa12.02□□□□□ -0.49
CTNS-202ENST00000381870 TCRAP04437 139 aa12.02□□□□□ -0.49
CTNS-202ENST00000381870 FTH1P19P0C7X4 201 aa12.02□□□□□ -0.49
CTNS-202ENST00000381870 SMIM13P0DJ93 91 aa12.02□□□□□ -0.49
CTNS-202ENST00000381870 OR5AN1Q8NGI8 311 aa12.02□□□□□ -0.49
CTNS-202ENST00000381870 SH3BGRL2Q9UJC5 107 aa12.02□□□□□ -0.49
CTNS-202ENST00000381870 URB1O60287 2271 aaKnown RBP12.02□□□□□ -0.49
CTNS-202ENST00000381870 CT45A6P0DMU7 189 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 CT45A5P0DMU8 189 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 CT45A7P0DMV0 189 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 IGHV1-2P23083 117 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 DHRS13Q6UX07 377 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 ARFGEF3Q5TH69 2177 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 PRB4P10163 310 aaPredicted RBP12.01□□□□□ -0.49
CTNS-202ENST00000381870 GCSHP23434 173 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 CFHR2P36980 270 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 FXYD2P54710 66 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 LGALS9BQ3B8N2 356 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 RUSC1-AS1Q66K80 236 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 LGALS9CQ6DKI2 356 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 RPRMLQ8N4K4 120 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 FAM222BQ8WU58 562 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 RND1Q92730 232 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 FLYWCH2Q96CP2 140 aaKnown RBP12.01□□□□□ -0.49
CTNS-202ENST00000381870 ASCL2Q99929 193 aa12.01□□□□□ -0.49
CTNS-202ENST00000381870 A0A1B0GUT8 65 aa12□□□□□ -0.49
CTNS-202ENST00000381870 CGB3P0DN86 165 aa12□□□□□ -0.49
CTNS-202ENST00000381870 CGB7P0DN87 165 aa12□□□□□ -0.49
CTNS-202ENST00000381870 ATP5IP56385 69 aaPredicted RBP12□□□□□ -0.49
CTNS-202ENST00000381870 ZNF436-AS1Q8NC38 126 aaPredicted RBP12□□□□□ -0.49
CTNS-202ENST00000381870 MRPS17Q9Y2R5 130 aaKnown RBP12□□□□□ -0.49
CTNS-202ENST00000381870 WFDC2Q14508 124 aa12□□□□□ -0.49
CTNS-202ENST00000381870 ABHD17BQ5VST6 288 aa12□□□□□ -0.49
CTNS-202ENST00000381870 COL25A1Q9BXS0 654 aaPredicted RBP12□□□□□ -0.49
CTNS-202ENST00000381870 Q9H3A6 140 aa12□□□□□ -0.49
CTNS-202ENST00000381870 NDUFA4L2Q9NRX3 87 aa12□□□□□ -0.49
CTNS-202ENST00000381870 NAV3Q8IVL0 2385 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 hADV38S2A0JD32 116 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.99□□□□□ -0.49
CTNS-202ENST00000381870 ERHP84090 104 aaKnown RBP11.99□□□□□ -0.49
CTNS-202ENST00000381870 SPRNQ5BIV9 151 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 DUX4L9Q6RFH8 374 aaPredicted RBP11.99□□□□□ -0.49
CTNS-202ENST00000381870 PRNTQ86SH4 94 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 Q86TA4 180 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 SRSF12Q8WXF0 261 aaKnown RBP11.99□□□□□ -0.49
CTNS-202ENST00000381870 VGLL1Q99990 258 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 SIGLEC8Q9NYZ4 499 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 TECTAO75443 2155 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 ZNF785A8K8V0 405 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 K7EMI3 77 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 CKS1BP61024 79 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 WT1-ASQ06250 92 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 C10orf55Q5SWW7 151 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 BCL6BQ8N143 479 aaPredicted RBP11.99□□□□□ -0.49
CTNS-202ENST00000381870 TPPP3Q9BW30 176 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 TTTY13Q9BZ97 58 aa11.99□□□□□ -0.49
CTNS-202ENST00000381870 SPANXB1Q9NS25 103 aaPredicted RBP11.99□□□□□ -0.49
CTNS-202ENST00000381870 SRRM5B3KS81 715 aa11.98□□□□□ -0.49
CTNS-202ENST00000381870 SCGB2A2Q13296 93 aa11.98□□□□□ -0.49
CTNS-202ENST00000381870 FAM201AQ5SY85 155 aa11.98□□□□□ -0.49
CTNS-202ENST00000381870 GCSAMQ8N6F7 178 aa11.98□□□□□ -0.49
CTNS-202ENST00000381870 PPP1R35Q8TAP8 253 aa11.98□□□□□ -0.49
CTNS-202ENST00000381870 TRAV26-1A0A087WT03 109 aa11.98□□□□□ -0.49
CTNS-202ENST00000381870 KBTBD11-OT1A0A1B0GTJ5 212 aa11.98□□□□□ -0.49
CTNS-202ENST00000381870 WFDC3Q8IUB2 231 aa11.98□□□□□ -0.49
CTNS-202ENST00000381870 ZNF414Q96IQ9 312 aa11.98□□□□□ -0.49
CTNS-202ENST00000381870 DKK2Q9UBU2 259 aa11.98□□□□□ -0.49
CTNS-202ENST00000381870 ZFHX4Q86UP3 3567 aa11.97□□□□□ -0.49
CTNS-202ENST00000381870 D6R8Y8 96 aa11.97□□□□□ -0.49
CTNS-202ENST00000381870 INO80CQ6PI98 192 aaPredicted RBP11.97□□□□□ -0.49
CTNS-202ENST00000381870 SLC25A48Q6ZT89 311 aaKnown RBP11.97□□□□□ -0.49
CTNS-202ENST00000381870 SH2D6Q7Z4S9 175 aa11.97□□□□□ -0.49
CTNS-202ENST00000381870 DEFB127Q9H1M4 99 aa11.97□□□□□ -0.49
CTNS-202ENST00000381870 C22orf46C9J442 243 aa11.97□□□□□ -0.49
CTNS-202ENST00000381870 GP9P14770 177 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms